BLASTX nr result

ID: Rehmannia26_contig00031542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00031542
         (396 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237479.1| PREDICTED: crossover junction endonuclease E...    83   3e-14
ref|XP_006357352.1| PREDICTED: crossover junction endonuclease E...    80   4e-13
ref|XP_006427922.1| hypothetical protein CICLE_v10025290mg [Citr...    59   9e-07

>ref|XP_004237479.1| PREDICTED: crossover junction endonuclease EME1B-like [Solanum
           lycopersicum]
          Length = 628

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 59/141 (41%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
 Frame = +3

Query: 3   NSTVFII-DDDPTPCKKNLPSLGPTSSTTPAFVAETPFSD-----ASIIKCSRGKCSFSG 164
           N TV +I DDD TP +         S +TP+FVA+TP SD      S ++CS G  S S 
Sbjct: 55  NPTVLVIEDDDETPVRP--------SKSTPSFVADTPMSDLSKPEVSFVRCSLGSSSISD 106

Query: 165 EGLATEQL---IVTDTPMSELLKSEVYLTKHNKGVPNS-DYAPLISDHNSAE-ISGRICV 329
              +   L   +V +TP SEL K  V + +  K   +S + +  I DHN  + I G IC+
Sbjct: 107 PKSSCLDLTPSMVAETPASELSKYSVPIVRCTKANADSKNCSSSIIDHNKDDGIDGVICL 166

Query: 330 ESDNESENIGGFGAWKFEESV 392
           ESDNESEN G  GAWK EE +
Sbjct: 167 ESDNESENSGYHGAWKEEEKL 187


>ref|XP_006357352.1| PREDICTED: crossover junction endonuclease EME1B-like [Solanum
           tuberosum]
          Length = 631

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 57/141 (40%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
 Frame = +3

Query: 3   NSTVFII-DDDPTPCKKNLPSLGPTSSTTPAFVAETPFSD-----ASIIKCSRGKCSFSG 164
           N TV +I DDD TP +         S +TP+FVA+TP SD      S ++CS G  S S 
Sbjct: 55  NPTVLVIEDDDETPFRP--------SKSTPSFVADTPMSDLSKPEVSFVRCSLGSSSISD 106

Query: 165 EGLATEQL---IVTDTPMSELLKSEVYLTKHNKG-VPNSDYAPLISDHNS-AEISGRICV 329
              +   L   +V +TP SEL K  V + +  K    + + +  I DHN    I G IC+
Sbjct: 107 PKSSCLDLTPSMVAETPASELSKYSVPIVRCTKANAVSQNCSSSIIDHNKDGGIDGVICL 166

Query: 330 ESDNESENIGGFGAWKFEESV 392
           ESDNESEN G  G WK E+ V
Sbjct: 167 ESDNESENSGYHGTWKEEQKV 187


>ref|XP_006427922.1| hypothetical protein CICLE_v10025290mg [Citrus clementina]
           gi|568820016|ref|XP_006464529.1| PREDICTED: crossover
           junction endonuclease EME1B-like [Citrus sinensis]
           gi|557529912|gb|ESR41162.1| hypothetical protein
           CICLE_v10025290mg [Citrus clementina]
          Length = 563

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/118 (35%), Positives = 53/118 (44%)
 Frame = +3

Query: 9   TVFIIDDDPTPCKKNLPSLGPTSSTTPAFVAETPFSDASIIKCSRGKCSFSGEGLATEQL 188
           TV I+DDDPTP K       P+SS+TP+FVAETP SD  IIKC       +       Q+
Sbjct: 37  TVLILDDDPTPKKSGF---APSSSSTPSFVAETPMSDVCIIKC-------TSRSWLDPQI 86

Query: 189 IVTDTPMSELLKSEVYLTKHNKGVPNSDYAPLISDHNSAEISGRICVESDNESENIGG 362
            V++                             SD N A  S  +C+ESDNE E+  G
Sbjct: 87  RVSN-----------------------------SDENLAGSSRLVCLESDNECESGSG 115


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