BLASTX nr result
ID: Rehmannia26_contig00031381
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00031381
(991 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 73 2e-10
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ... 72 3e-10
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 70 1e-09
ref|XP_006404270.1| hypothetical protein EUTSA_v10011157mg, part... 69 4e-09
gb|AFK38936.1| unknown [Medicago truncatula] 68 5e-09
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [... 67 1e-08
ref|XP_002865522.1| hypothetical protein ARALYDRAFT_917523 [Arab... 67 1e-08
gb|EMJ09977.1| hypothetical protein PRUPE_ppa023808mg, partial [... 65 3e-08
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ... 63 2e-07
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A... 63 2e-07
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 62 3e-07
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 61 8e-07
ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicag... 60 1e-06
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 60 1e-06
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 60 1e-06
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 60 2e-06
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 59 3e-06
ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein A... 59 3e-06
gb|EMJ12186.1| hypothetical protein PRUPE_ppa021345mg [Prunus pe... 58 6e-06
dbj|BAB02611.1| unnamed protein product [Arabidopsis thaliana] 57 8e-06
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 72.8 bits (177), Expect = 2e-10
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 10/263 (3%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
+ +++ L N+ +G+ ID C CG + ET+EH+ + C + + W ++P+ + T
Sbjct: 1069 KAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIH---T 1125
Query: 810 SEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEFATK 631
++ G + V ++ T + ++ I W +W RN W F+ + +E+VE A +
Sbjct: 1126 GNIEAGSFRIWVESLLDTHKDTEWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVR 1185
Query: 630 EWLEYNSVRSKDDQHFKNPGIYHTSP------YLNPDVAKDVGQFYILVSVQVQLNKEAG 469
+E+ + HTSP + N VG + V V + G
Sbjct: 1186 GVMEFEEECA------------HTSPVETLNTHENGWSVPPVGMVKLNVDAAVFKHVGIG 1233
Query: 468 WGIVVKNTEGNIIKSWYTSRDCGG----SPVEVLLLAIREGQLMAYKEKWKRIIFLLEDE 301
G VV++ EG+++ + CGG P ++R G +AY+ ++ ++ ++ +
Sbjct: 1234 MGGVVRDAEGDVL----LATCCGGWAMEDPAMAEACSLRYGLKVAYEAGFRNLVVEMDCK 1289
Query: 300 SLVTILNGGQCSALESSSTAEDI 232
L L G +DI
Sbjct: 1290 KLFLQLRGKASDVTPFGRVVDDI 1312
>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|3184275|gb|AAC18922.1| putative reverse transcriptase
[Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
H domain-containing protein [Arabidopsis thaliana]
Length = 365
Score = 72.0 bits (175), Expect = 3e-10
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 21/265 (7%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAP-VSWNIW- 817
RCV L + L S+ + D IC C E ET HI F+CP VW+ A + N W
Sbjct: 52 RCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWG 111
Query: 816 PTSEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLM-PEKEI--- 649
P S + + T+T + DR + +I+W LWK+RN++ FQ P+ E
Sbjct: 112 PPSSFEDNLNRLIQLSKTQTTNSLDRF-LPFWIMWRLWKSRNVFLFQQKCQSPDYEARKG 170
Query: 648 VEFATKEWLEYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILVSVQVQLNKEAG 469
++ AT EWL N + H I + +D Q+ V+ N ++G
Sbjct: 171 IQDAT-EWLNANETTENTNVHVATNPIQTS--------RRDSSQWNPPPEGWVKCNFDSG 221
Query: 468 WGIVVKNTEGN-IIKSWYTSRDCGGSPV----------EVLLLAIREGQLMAYKEKW--- 331
+ T+G+ +S +T R+C G V L A G L A + W
Sbjct: 222 Y------TQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCSLHAEALGFLHALQVIWAHG 275
Query: 330 -KRIIFLLEDESLVTILNGGQCSAL 259
+ + F + +SLVT++N G+ +L
Sbjct: 276 LRYVWFESDSKSLVTLINNGEDHSL 300
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 70.5 bits (171), Expect = 1e-09
Identities = 38/132 (28%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPV--SWNIW 817
+C+ L + L S+ + +++C CG E E+ H+ F CP + ++W L+P+ S I+
Sbjct: 941 QCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIF 1000
Query: 816 PTSEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEFA 637
P + + + + + + + A D + + +ILW++WK+RN + F+NV+ + I++FA
Sbjct: 1001 PRNSLFYNFDFL-LSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFA 1059
Query: 636 TKE---WLEYNS 610
+E W + NS
Sbjct: 1060 IQEANVWKQANS 1071
>ref|XP_006404270.1| hypothetical protein EUTSA_v10011157mg, partial [Eutrema
salsugineum] gi|557105389|gb|ESQ45723.1| hypothetical
protein EUTSA_v10011157mg, partial [Eutrema salsugineum]
Length = 259
Score = 68.6 bits (166), Expect = 4e-09
Identities = 69/266 (25%), Positives = 100/266 (37%), Gaps = 1/266 (0%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
R LP NL S+ L D C CG + E+++H+ FHC A VW AP S I
Sbjct: 7 RAARGALPVGTNLASRILGTDPSCHRCG-QPESTDHLLFHCDFARTVWHTAPFSPPISIH 65
Query: 810 SEVQFGWWWKEV-CTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEFAT 634
+ QF + WK+V T + ++ +I W LWK RN N + +K E T
Sbjct: 66 QDQQFHYLWKDVKDTSCSPPLDLPKGLLAPWICWNLWKARN-----NSIFSDKSFSEVET 120
Query: 633 KEWLEYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILVSVQVQLNKEAGWGIVV 454
LN +A D ++Y Q K AG G
Sbjct: 121 ----------------------------LNKSIA-DASKWY---KGQTSKPKRAGLGWTF 148
Query: 453 KNTEGNIIKSWYTSRDCGGSPVEVLLLAIREGQLMAYKEKWKRIIFLLEDESLVTILNGG 274
G + + C SP+ +A+R +A E + + + +L+ +N G
Sbjct: 149 SPLSGPGPRLFSRVSGCIPSPLIAEGMAMRSALSVAAAEDIRNLSVFSDSLTLIKAINSG 208
Query: 273 QCSALESSSTAEDIFLFKNLFDCCLF 196
+ E EDI LFD F
Sbjct: 209 -TTVSEIHGILEDISCLSELFDSISF 233
>gb|AFK38936.1| unknown [Medicago truncatula]
Length = 297
Score = 68.2 bits (165), Expect = 5e-09
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 4/242 (1%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
R +++P+ NL +G+ +D +C C + E+S H+F CP ++VW +P+ + P
Sbjct: 3 RLARNIIPTRCNLRRRGVVLDTVCPLCFDADESSNHLFMACPMTLQVWFASPLGFQPPPQ 62
Query: 810 SEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEFATK 631
+++ W + K A + + LW +W RN F V+ + + A
Sbjct: 63 TDLNA---WLQSWLSAKEPLA---VQLFCVCLWKIWFFRNQAIFNQVVFEPRMVAASAHD 116
Query: 630 EWLEYNSVR-SKDDQHFKNPGIYHTSP---YLNPDVAKDVGQFYILVSVQVQLNKEAGWG 463
E+N ++ + P +P +L ++ D G+ + + WG
Sbjct: 117 FVSEFNLANPTRSVDRLQIPAQVWIAPPTDFLKANI--DAGR---------DKHGKVTWG 165
Query: 462 IVVKNTEGNIIKSWYTSRDCGGSPVEVLLLAIREGQLMAYKEKWKRIIFLLEDESLVTIL 283
+V++N E ++ + S D P+ V L +R G + + ++F L+ +V
Sbjct: 166 LVIRNHESEVLFAATQSPDIMADPLLVETLGLRWGIQTVLELQLSNVMFELDASVVVKCF 225
Query: 282 NG 277
NG
Sbjct: 226 NG 227
>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 66.6 bits (161), Expect = 1e-08
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 7/249 (2%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
R + LP+ NL + + C C E+ EH F CP VW +P+++ + P
Sbjct: 622 RMMVRALPTKLNLYRRRIISSPFCPICNQYEESEEHAIFLCPWTQAVWFGSPLNYRVNPQ 681
Query: 810 SEVQFGWWWKEVCT---MTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEF 640
S F W+ + +K++ + +S+ +I W +WK R + F+++ + + +VE
Sbjct: 682 SITTFDRWFTGLLNSQMFSKSERVW-VLSLVSFISWEIWKARCKFLFEDITIDPRCVVER 740
Query: 639 ATKEWLEYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILVSVQVQ-LNKEAGWG 463
A E++ +R + G++ D+ K I ++ N EAG G
Sbjct: 741 AASAAEEFDVLRRHEISTRNGAGVFSQP----TDIWKPPVNGAIKINFDAAWKNHEAGLG 796
Query: 462 IVVKNTEGNIIKSWYTSRDCG---GSPVEVLLLAIREGQLMAYKEKWKRIIFLLEDESLV 292
+V++N + + + R C + E + A+R L Y +I + + L+
Sbjct: 797 VVMRNHNKDFCYGFASKRCCNSALNAETEAAIEALRCASLRGY----SKIEMESDSKVLI 852
Query: 291 TILNGGQCS 265
+ G C+
Sbjct: 853 DSIKGNVCT 861
>ref|XP_002865522.1| hypothetical protein ARALYDRAFT_917523 [Arabidopsis lyrata subsp.
lyrata] gi|297311357|gb|EFH41781.1| hypothetical protein
ARALYDRAFT_917523 [Arabidopsis lyrata subsp. lyrata]
Length = 352
Score = 66.6 bits (161), Expect = 1e-08
Identities = 68/291 (23%), Positives = 126/291 (43%), Gaps = 27/291 (9%)
Frame = -2
Query: 963 AANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPTSEVQFGWWW 784
A NL + + ++ C C NE+ET++H F CP +W+ A + PT ++ W
Sbjct: 48 AENLRRRNMNVNPYCSRCCNELETNDHTLFSCPSIRPIWRAAGI-----PTQDL----WD 98
Query: 783 KEVCTMTKTQFAYDRIS----------MSVYILWWLWKTRNLWRFQNVLMPEKEIVEFA- 637
++ K +F D + ++LW +WKTRN F + + ++IV A
Sbjct: 99 RDKPFEGKIRFLLDLHDNKHIDKVCRYLPFWLLWRIWKTRNDLIFNHKVTKGEDIVGQAL 158
Query: 636 --TKEWLEYNSVRSKDDQH-FKNPGI--YHTSPYLNPDVAKDVGQFYILVSVQVQLNKEA 472
TKEWL+ R+ QH K G+ +S + P+ F + + N+ +
Sbjct: 159 IDTKEWLDCQD-RTHGPQHDGKLQGVRSSRSSKWCKPERGYVKCNF---DASHYEGNQSS 214
Query: 471 GWGIVVKNTEGNIIKSWYTSRDCG-----------GSPVEVLLLAIREGQLMAYKEKWKR 325
G G +++++ G T DCG + L+ AI+ + Y +
Sbjct: 215 GLGRIIRDSNG-------TCLDCGMGKFQGRQTIEEAECSALIWAIQASWALGY----RH 263
Query: 324 IIFLLEDESLVTILNGGQCSALESSSTAEDIFLFKNLFDCCLFQLSDNLRN 172
+ F ++ ++V ++N G + L E+I+ ++N+F+ F +N
Sbjct: 264 VEFEGDNANIVNLINEGGIN-LRLKHYMEEIWQWRNMFNSIKFTFRHREQN 313
>gb|EMJ09977.1| hypothetical protein PRUPE_ppa023808mg, partial [Prunus persica]
Length = 348
Score = 65.5 bits (158), Expect = 3e-08
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 4/200 (2%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
R + + L ++ANL K + +C C ++ +T++HI CP VW ++ I
Sbjct: 85 RALRNCLATSANLHKKKIARSPMCPLCNDQSKTAKHILIFCPWVDPVWCGCSLNLRINRQ 144
Query: 810 SEVQFGWWWKEVCTMTKT-QFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEFAT 634
+ FG W + V KT Q I + Y W +WK R +++ + + A+
Sbjct: 145 AVTSFGQWLRNVIEEEKTLQQRSQCIIVIAYFCWQIWKDRCKGMLEHISLSPARTIHVAS 204
Query: 633 KEWLEYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILVSVQVQLN---KEAGWG 463
E+ + PG+ + + + + ++ V+V+ N + G G
Sbjct: 205 ISINEFLGTLDHGRHQTEPPGLSNAN---QKHLWNLLAPRFVKVNVEASWNPKSRRVGIG 261
Query: 462 IVVKNTEGNIIKSWYTSRDC 403
I++KNT G+ +K SR C
Sbjct: 262 ILIKNTYGDFLKGAGLSRSC 281
>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1197
Score = 63.2 bits (152), Expect = 2e-07
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSW--NIW 817
+ V LP + L + D +C CG E+ETS H F+C +VW+LAP+
Sbjct: 888 KAVSGALPVGSQLAIRIPSFDPVCCRCG-ELETSSHALFNCMFVQRVWRLAPLEGIDLFL 946
Query: 816 PTSEVQFGW-WWKEVCTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEF 640
++V+ G W K+ T+ Y ++ +I W LW TRN F N+L E E +
Sbjct: 947 VFTDVKLGLSWLKKKKTLPSVGLGY--CALYPWICWTLWITRNQKVFSNILFSELETINK 1004
Query: 639 A---TKEW 625
A KEW
Sbjct: 1005 AIQDAKEW 1012
>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 335
Score = 62.8 bits (151), Expect = 2e-07
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 13/246 (5%)
Frame = -2
Query: 978 SLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWP-TSEV 802
+LLP+A NLC +G+ + C CGN+VE H+ C A KVW+ +PV+ + S
Sbjct: 39 NLLPTAENLCKRGIVQEAHCKRCGNKVENILHVLVTCKAAKKVWQRSPVADAVHKIDSSN 98
Query: 801 QFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQ------NVLMPEKEIVEF 640
FG T + + D + + +LW +W RN + F+ + + + E ++
Sbjct: 99 LFG-----ELTKLQRSLSNDDFELLLVLLWIIWYARNKFVFEGMKIDPGISVAKAEAIKE 153
Query: 639 ATKE------WLEYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILVSVQVQLNK 478
A K + NS+R + ++ P + +N D A D +K
Sbjct: 154 AYKRTQFPEMLVGKNSLRQEQNKWAPPPPRW---VKINVDAAIDA------------KSK 198
Query: 477 EAGWGIVVKNTEGNIIKSWYTSRDCGGSPVEVLLLAIREGQLMAYKEKWKRIIFLLEDES 298
+G G V+K+ G + S G + A G +A +E + +I + ++
Sbjct: 199 CSGLGAVIKDPSGKCFVAAVKSVTSKGDVLLAEAEADEWGTYLAKEEGMQAVILETDSKA 258
Query: 297 LVTILN 280
V ++N
Sbjct: 259 TVDLIN 264
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 62.4 bits (150), Expect = 3e-07
Identities = 70/282 (24%), Positives = 116/282 (41%), Gaps = 9/282 (3%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
R + LP+ + L ++G+ ID C C E ET H+ F CP A +W L+ W T
Sbjct: 1377 RTISKALPTRSRLLTRGMDIDPHCPRCPTEEETINHVLFTCPYAASIWGLSNFPWLPGHT 1436
Query: 810 SEVQFGWWWKEVCTMTKTQFAYDRISMS-----VYILWWLWKTRNLWRFQNVLMPEKEIV 646
F +E + F+ + ++ +++W LWK RN F +V
Sbjct: 1437 ----FSQDTEENISFLINSFSNNTLNTEQRLAPFWLIWRLWKARNNLVFNKFSESCSRVV 1492
Query: 645 ---EFATKEWLEYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILVSVQVQLNKE 475
E EWL+ SV ++D + +S N K V V+ N +
Sbjct: 1493 TQTEAEVNEWLQ--SVNRREDASV----LTRSSHRANVRWKKPVFPL-------VKCNFD 1539
Query: 474 AGW-GIVVKNTEGNIIKSWYTSRDCGGSPVEVLLLAIREGQLMAYKEKWKRIIFLLEDES 298
AG+ G ++T G II + LL+A+++ + Y K + F + E
Sbjct: 1540 AGFTGNNTQSTGGWIIPE-----------TKALLIAMQQAWVRGY----KCVQFEGDCEI 1584
Query: 297 LVTILNGGQCSALESSSTAEDIFLFKNLFDCCLFQLSDNLRN 172
L+ +NG S E +S D+ + + F +F ++ L N
Sbjct: 1585 LIKAINGA-ISRCEITSLLRDVDFWASRFSTVVFTFTNRLCN 1625
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 60.8 bits (146), Expect = 8e-07
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
+ ++ +P L ++G++ D+ C C E ET HI F CP A +VW + +S
Sbjct: 1060 KALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGSEF 1119
Query: 810 SEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEFATK 631
S + + + + + +S +ILW+LWK RN F+ +V+ A +
Sbjct: 1120 SNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYE 1179
Query: 630 ---EWLEYNSVRSKDDQHFK 580
EW + D++H K
Sbjct: 1180 AYHEWFSAQTHMQNDEKHLK 1199
>ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355510286|gb|AES91428.1| Cytosine-specific
methyltransferase [Medicago truncatula]
Length = 569
Score = 60.5 bits (145), Expect = 1e-06
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGN-EVETSEHIFFHCPRAMKVWKLAPVSWNIWP 814
R +++ LP+ +NL +G+ C +C N ++E H+F HC A+ WK A + W I
Sbjct: 333 RLLHNCLPTRSNLQGRGVPCQSACVTCNNNDLEDEMHLFMHCKFAIDCWKAANL-WGIIA 391
Query: 813 TSEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEFAT 634
G + + + + F + + V ILW +W+ RN R Q V+ P +
Sbjct: 392 PYMTSSGSFSAIIFAILRA-FEAENCAKFVDILWSIWRARNYSRLQ-VVQPATPVWSKPP 449
Query: 633 KEWLEYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILVSVQVQL 484
+W++ N D F+ G + +++K +F+ L +Q+ +
Sbjct: 450 TDWIKCN----VDCAIFEAEGKFGVGICFRDNLSKLTQRFFPLFQLQLNV 495
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 60.1 bits (144), Expect = 1e-06
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
R + + LP A + +G+ ID C CG+E E++ H+ F C A +VW L+ V PT
Sbjct: 837 RILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGV-----PT 891
Query: 810 SEVQFGWWWKEVCTMTKTQFAYDRISMSV----------YILWWLWKTRNLWRFQNV-LM 664
E F + QF ++ M + ++LW LWK RN F +
Sbjct: 892 PEFGF----QNASIFANIQFLFELKKMILVPDLVKRSWPWVLWRLWKNRNKLFFDGITFC 947
Query: 663 PEKEIVEFA--TKEWLEYNS 610
P IV+ T EW + S
Sbjct: 948 PLNSIVKIQEDTLEWFQAQS 967
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 60.1 bits (144), Expect = 1e-06
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 19/255 (7%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
RCV + L A+NL + L ++ C C + ET H+ F CP A W ++P+
Sbjct: 1069 RCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPL------- 1121
Query: 810 SEVQFGWWWKE--------VCTMTKTQ-FAYDRISMSVYILWWLWKTRNLWRFQNVLMPE 658
G W E V ++ K+Q D ++ +ILW LWK RN F+
Sbjct: 1122 -PAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTA 1180
Query: 657 KEIVEFATKEWLEYNS--------VRSKDDQHFKNPGIYHTSPYLNPDVA--KDVGQFYI 508
+++ AT++ +N+ S D+ K H N D A KD+G
Sbjct: 1181 PQVILKATEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGWVKCNTDGAWSKDLG---- 1236
Query: 507 LVSVQVQLNKEAGWGIVVKNTEGNIIKSWYTSRDCGGSPVEVLLLAIREGQLMAYKEKWK 328
N GW V++N G ++ + S +E + A+R L + ++
Sbjct: 1237 --------NCGVGW--VLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSRFNYR 1286
Query: 327 RIIFLLEDESLVTIL 283
R+IF + + LV+++
Sbjct: 1287 RVIFESDSQYLVSLI 1301
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 59.7 bits (143), Expect = 2e-06
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Frame = -2
Query: 972 LPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLA--PVSWNIWPTSEVQ 799
+P + NL +G+ D+ C SCG E+ H F C A ++W L+ P + I+P++ +
Sbjct: 849 VPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSI- 907
Query: 798 FGWWWKEVCTMTKTQFAYDRISMSV------YILWWLWKTRNLWRFQNVLMPEKEIVEFA 637
T + RI V +I+W++WK RN F+NV EI+ A
Sbjct: 908 ----------FTNLDHLFWRIPSGVDSAPYPWIIWYIWKARNEKVFENVDKDPMEILLLA 957
Query: 636 TKE 628
KE
Sbjct: 958 VKE 960
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 58.9 bits (141), Expect = 3e-06
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 4/191 (2%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
R LLP++ NL + + C C + ET H F C + K+WKL +
Sbjct: 468 RATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKAL 527
Query: 810 SEVQFGWWWKEVCTM---TKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEF 640
K+V ++ + + + + V + W +W +RNL+ FQN + V
Sbjct: 528 K-------CKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAG 580
Query: 639 ATKEWLEYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILVSVQVQL-NKEAGWG 463
A Y ++ Q F N + + P G F + V ++L N+ G G
Sbjct: 581 AEAIVQSYKRIQMPQLQAFSNQDLVSHKHWKCP----PAGWFKVNVDAAIKLENQRVGLG 636
Query: 462 IVVKNTEGNII 430
IV++N+EG I
Sbjct: 637 IVIRNSEGKFI 647
>ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 393
Score = 58.9 bits (141), Expect = 3e-06
Identities = 55/267 (20%), Positives = 96/267 (35%), Gaps = 1/267 (0%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
R ++P+ A L + D C CGNEVET H+F CP WK P+ +
Sbjct: 69 RLCLEVIPTRAALSRRLFITDVRCIFCGNEVETGLHLFRDCPVVQSFWKHNPLHLRSYSY 128
Query: 810 SEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTRNLWRFQNVLMPEKEIVEFATK 631
W + + ++ LW +W RN ++ + +A +
Sbjct: 129 PGSTLAVW----VFLVMDNLSMQQLEGFFMALWTVWIERNNMIWRGGSCNPSNMSVWAMQ 184
Query: 630 EWLEYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILV-SVQVQLNKEAGWGIVV 454
EY V +K K P P G+ + + ++ ++ G G+VV
Sbjct: 185 LLEEYKKVHTKPSVKMKRPRAKWCCP--------PSGRLKLNIDGAYLEDGRKGGIGVVV 236
Query: 453 KNTEGNIIKSWYTSRDCGGSPVEVLLLAIREGQLMAYKEKWKRIIFLLEDESLVTILNGG 274
+N GN + + S + + A+R L+A + W + + ++ L
Sbjct: 237 RNEYGNCVAALSRHMPYASSAMHMEAEALRASLLIAIHQGWDEVEIEGDCAIVMKALANT 296
Query: 273 QCSALESSSTAEDIFLFKNLFDCCLFQ 193
+E SS D + F L +
Sbjct: 297 DGDVIEVSSILSDCRHYMEAFRLILLR 323
>gb|EMJ12186.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
Length = 759
Score = 57.8 bits (138), Expect = 6e-06
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 17/205 (8%)
Frame = -2
Query: 990 RCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPT 811
R + + L ++ANL K + +C C + ET+EHI CP VW ++ I
Sbjct: 458 RALRNCLATSANLHKKKIARSPMCPLCNDHPETAEHILLLCPWVEPVWFRCSLNLRINRQ 517
Query: 810 SEVQFGWWWKEVCTMTKTQFAYDR-ISMSVYILWWLWKTRNLWRFQNVL-MPEK--EIVE 643
+ FG W V KT R +++ Y W +WK + +++ P +
Sbjct: 518 AVTSFGQWLGNVIEKGKTPQERSRCLTVIAYFCWQIWKDKCKAVLEHISPSPARTTHAAS 577
Query: 642 FATKEWL----------EYNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVGQFYILVSVQ 493
A E+L E+ ++ + + Q NP TSP ++ V+V
Sbjct: 578 IAINEFLGSLDHGRHQTEHPTLSNDNQQQLWNP---PTSP-------------FVKVNVD 621
Query: 492 VQLN---KEAGWGIVVKNTEGNIIK 427
N K G GI+++NT G+ IK
Sbjct: 622 ASWNPNSKRVGIGILIRNTHGDFIK 646
>dbj|BAB02611.1| unnamed protein product [Arabidopsis thaliana]
Length = 332
Score = 57.4 bits (137), Expect = 8e-06
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Frame = -2
Query: 972 LPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPRAMKVWKLAPVSWNIWPTSEVQFG 793
LP L ++G+ ++ C CG E+E + HIFF CP A+KVW LA + P
Sbjct: 153 LPIGTALSARGIVVETGCKRCG-EIEDALHIFFRCPIAVKVWDLA----TLLPKPRAGSV 207
Query: 792 WWWKEVCTMTKTQFAYDRISMS-----VYILWWLWKTRNLWRFQNVLMPEKEIVE---FA 637
+ K++ +T + + + +ILW+LWK RN F++ ++ ++ V+
Sbjct: 208 VYVKKILEKGRTCLSLPPLGLGSTPLYPWILWFLWKARNFVIFEDRILFAEDTVQKSILE 267
Query: 636 TKEW 625
K W
Sbjct: 268 AKRW 271