BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00031380
         (421 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   173   2e-41
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe...   172   5e-41
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   169   3e-40
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              169   3e-40
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ...   168   8e-40
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]           164   1e-38
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...   164   1e-38
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]           163   2e-38
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu...   160   1e-37
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   160   2e-37
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   160   2e-37
ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   159   4e-37
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   157   2e-36
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   155   4e-36
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   155   5e-36
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   155   7e-36
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   155   7e-36
ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mit...   150   2e-34
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   150   2e-34
ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   150   2e-34

>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 468

 Score =  173 bits (438), Expect = 2e-41
 Identities = 89/136 (65%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
 Frame = -1

Query: 403 SKIRPPPPS--QPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSGQHVTA 230
           S+I PPPP+   PVIRVSN++AHLG PK+GPKPRQL+SLPPFPG PLPGR S +  HVTA
Sbjct: 18  SRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPFPGLPLPGRNSMA-SHVTA 76

Query: 229 ISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIMEVGAR 50
           ISW+KYYFD+I    IQ+HFNKGL  +EC +  G +  Y GQ +S+RKIK +DIME GAR
Sbjct: 77  ISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSIE-YGGQ-MSLRKIKHNDIMEAGAR 134

Query: 49  VYAPVSVAESKISKRF 2
           V+  VSVAE++ISKRF
Sbjct: 135 VHVAVSVAETRISKRF 150


>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  172 bits (435), Expect = 5e-41
 Identities = 87/145 (60%), Positives = 107/145 (73%), Gaps = 5/145 (3%)
 Frame = -1

Query: 421 VRRNPRSKIRPPPPSQ--PVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTS 248
           V R   S++ PPP     P+IRVSNH+A LG PKEGPKPRQL+SLPPFPGHPLPG++S  
Sbjct: 13  VARREYSRVCPPPAKSAGPLIRVSNHVARLGPPKEGPKPRQLLSLPPFPGHPLPGKRSHE 72

Query: 247 G---QHVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKP 77
           G     VTA+SW+KYYFD I    IQ+HF +GL+QMEC    G +   +GQ   MRKI+P
Sbjct: 73  GGVVSRVTAVSWVKYYFDGIYDSTIQSHFKQGLVQMEC---PGMIE-KEGQMKPMRKIRP 128

Query: 76  SDIMEVGARVYAPVSVAESKISKRF 2
           S++MEVGARVY PVSV ES++S+RF
Sbjct: 129 SEVMEVGARVYVPVSVVESRVSRRF 153


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  169 bits (429), Expect = 3e-40
 Identities = 85/140 (60%), Positives = 106/140 (75%), Gaps = 6/140 (4%)
 Frame = -1

Query: 403 SKIRPPPPSQ--PVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRK--STSG--Q 242
           S+I PP P+   PVIRVSN++A LG PKEGPKPRQL+SLPPFP HPLPG+   + SG   
Sbjct: 20  SRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLPGKSLVNVSGLPT 79

Query: 241 HVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIME 62
           HVTAISW+KYYFD+IP  V+Q+HFNKGL+ ME  +        +GQ   +RKIKP+++ME
Sbjct: 80  HVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRKIKPNEVME 139

Query: 61  VGARVYAPVSVAESKISKRF 2
            G R+Y PVSVAE++ISKRF
Sbjct: 140 AGTRIYVPVSVAEARISKRF 159


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  169 bits (429), Expect = 3e-40
 Identities = 85/140 (60%), Positives = 106/140 (75%), Gaps = 6/140 (4%)
 Frame = -1

Query: 403 SKIRPPPPSQ--PVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRK--STSG--Q 242
           S+I PP P+   PVIRVSN++A LG PKEGPKPRQL+SLPPFP HPLPG+   + SG   
Sbjct: 20  SRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLPGKSLVNVSGLPT 79

Query: 241 HVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIME 62
           HVTAISW+KYYFD+IP  V+Q+HFNKGL+ ME  +        +GQ   +RKIKP+++ME
Sbjct: 80  HVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRKIKPNEVME 139

Query: 61  VGARVYAPVSVAESKISKRF 2
            G R+Y PVSVAE++ISKRF
Sbjct: 140 AGTRIYVPVSVAEARISKRF 159


>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score =  168 bits (425), Expect = 8e-40
 Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 2/136 (1%)
 Frame = -1

Query: 403 SKIRPPPPS--QPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSGQHVTA 230
           S++ PPPP+   PV+RVSN +A+LG PK+GPKPRQL+SLPPFPG+PLPG+       VTA
Sbjct: 18  SRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPGYPLPGKNPGGTARVTA 77

Query: 229 ISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIMEVGAR 50
           ISWLKYYFD+IP   IQ+HFNKGL+QME  ++        G    +RKIK +++MEVG R
Sbjct: 78  ISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLMKPLRKIKHNEVMEVGTR 137

Query: 49  VYAPVSVAESKISKRF 2
           V+ PVS+AE++ISKRF
Sbjct: 138 VWVPVSIAETRISKRF 153


>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  164 bits (415), Expect = 1e-38
 Identities = 82/136 (60%), Positives = 104/136 (76%), Gaps = 2/136 (1%)
 Frame = -1

Query: 403 SKIRPPPPSQ--PVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSGQHVTA 230
           S+IRPP  ++  PVIRVSN++A LG PKEGPKPRQL+SLPPFPG PLPG+KS   + VTA
Sbjct: 10  SRIRPPAAAEAGPVIRVSNNVAQLGGPKEGPKPRQLLSLPPFPGLPLPGKKS---ERVTA 66

Query: 229 ISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIMEVGAR 50
           I+W+KYYF+++   VIQ+HFNK L+QMEC +    L     +   MRKIKP+++M  G R
Sbjct: 67  ITWVKYYFEEVHDNVIQSHFNKSLVQMECSNFGDPLAERDRKMKPMRKIKPNEVMVEGTR 126

Query: 49  VYAPVSVAESKISKRF 2
           +Y PVSVAES+ISKRF
Sbjct: 127 IYVPVSVAESRISKRF 142


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
           PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like isoform X3
           [Solanum tuberosum]
          Length = 475

 Score =  164 bits (415), Expect = 1e-38
 Identities = 81/130 (62%), Positives = 101/130 (77%), Gaps = 5/130 (3%)
 Frame = -1

Query: 376 QPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSGQ-----HVTAISWLKY 212
           +PVIRVSN+I HLGR KEG KP QL+SLPPFPGHPLPG+K  +G      HVTAISW+KY
Sbjct: 32  EPVIRVSNNITHLGRQKEGAKPSQLLSLPPFPGHPLPGKKVATGPDQPSCHVTAISWIKY 91

Query: 211 YFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIMEVGARVYAPVS 32
           YFD+IP  VIQ HFNKGL+Q+E  +        +GQT  +RKIK S++MEVGAR++ P+S
Sbjct: 92  YFDEIPGSVIQTHFNKGLVQLEFNE---LFTSKEGQTRLLRKIKHSEVMEVGARIHVPIS 148

Query: 31  VAESKISKRF 2
           VAE++ISKR+
Sbjct: 149 VAETRISKRY 158


>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  163 bits (413), Expect = 2e-38
 Identities = 82/136 (60%), Positives = 103/136 (75%), Gaps = 2/136 (1%)
 Frame = -1

Query: 403 SKIRPPPPSQ--PVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSGQHVTA 230
           S+IRPP  ++  PVIRVSN++A LG PKEGPKPRQL+SLPPFPG PLPG+ S   + VTA
Sbjct: 10  SRIRPPAAAEAGPVIRVSNNVAQLGGPKEGPKPRQLLSLPPFPGLPLPGKNS---ERVTA 66

Query: 229 ISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIMEVGAR 50
           ISW+KYYF+++   VIQ+HFNK L+QMEC +    L     +   MRKIKP+++M  G R
Sbjct: 67  ISWVKYYFEEVHDNVIQSHFNKSLVQMECSNFGDPLAERDRKMKPMRKIKPNEVMVEGTR 126

Query: 49  VYAPVSVAESKISKRF 2
           +Y PVSVAES+ISKRF
Sbjct: 127 IYVPVSVAESRISKRF 142


>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
           gi|550341843|gb|ERP62872.1| hypothetical protein
           POPTR_0004s23670g [Populus trichocarpa]
          Length = 462

 Score =  160 bits (406), Expect = 1e-37
 Identities = 80/124 (64%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
 Frame = -1

Query: 370 VIRVS-NHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSGQHVTAISWLKYYFDDIP 194
           V+RV+  ++A LG PKEGPKPRQL+SLPPFPG PLPG+KS +  HVTAISW+KYYFD+I 
Sbjct: 22  VVRVTAKNVAKLGSPKEGPKPRQLLSLPPFPGFPLPGKKSLNACHVTAISWVKYYFDEIQ 81

Query: 193 PPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIMEVGARVYAPVSVAESKI 14
             VIQ+HFNK L+Q+EC  S   +   +G    MRKIKPSD+MEVGAR++ PVSVAE+ I
Sbjct: 82  DSVIQSHFNKSLVQIECPSSSDSVE-MEGLGKPMRKIKPSDVMEVGARIHIPVSVAETAI 140

Query: 13  SKRF 2
           SKRF
Sbjct: 141 SKRF 144


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  160 bits (404), Expect = 2e-37
 Identities = 83/142 (58%), Positives = 103/142 (72%), Gaps = 8/142 (5%)
 Frame = -1

Query: 403 SKIRPPPPS--QPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRK----STSGQ 242
           S+I PPPP+  +P+IRVSN+IA LG PKEGPK RQL+SLPPFPG+PLPG+     S    
Sbjct: 17  SRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQVGVSGEST 76

Query: 241 HVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCY--KGQTVSMRKIKPSDI 68
           HVTAI W+KYYFD+I    IQ+HF KGL+Q+EC     QLG    KG    MRKI+  +I
Sbjct: 77  HVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVEC----PQLGGLDEKGNLKPMRKIRSGEI 132

Query: 67  MEVGARVYAPVSVAESKISKRF 2
           ME GAR++ PVSVAE K+++RF
Sbjct: 133 METGARIHLPVSVAEMKVARRF 154


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  160 bits (404), Expect = 2e-37
 Identities = 83/142 (58%), Positives = 103/142 (72%), Gaps = 8/142 (5%)
 Frame = -1

Query: 403 SKIRPPPPS--QPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRK----STSGQ 242
           S+I PPPP+  +P+IRVSN+IA LG PKEGPK RQL+SLPPFPG+PLPG+     S    
Sbjct: 17  SRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQVGVSGEST 76

Query: 241 HVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCY--KGQTVSMRKIKPSDI 68
           HVTAI W+KYYFD+I    IQ+HF KGL+Q+EC     QLG    KG    MRKI+  +I
Sbjct: 77  HVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVEC----PQLGGLDEKGNLKPMRKIRSGEI 132

Query: 67  MEVGARVYAPVSVAESKISKRF 2
           ME GAR++ PVSVAE K+++RF
Sbjct: 133 METGARIHLPVSVAEMKVARRF 154


>ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Solanum
           lycopersicum]
          Length = 475

 Score =  159 bits (402), Expect = 4e-37
 Identities = 79/130 (60%), Positives = 101/130 (77%), Gaps = 5/130 (3%)
 Frame = -1

Query: 376 QPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSGQ-----HVTAISWLKY 212
           +PVIRVSN+I HLGR K+G KP QL+SLPPFPG PLPG+K  +G      HVTAISW+KY
Sbjct: 32  EPVIRVSNNITHLGRQKDGVKPSQLLSLPPFPGCPLPGKKVATGPDQPSCHVTAISWIKY 91

Query: 211 YFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIMEVGARVYAPVS 32
           YFD+IP  VIQ+HFNKGL+Q+E  +        +GQT  +RKIK S++MEVGAR++ P+S
Sbjct: 92  YFDEIPGSVIQSHFNKGLVQLELNE---LFTSKEGQTRLLRKIKHSEVMEVGARIHVPIS 148

Query: 31  VAESKISKRF 2
           VAE++ISKR+
Sbjct: 149 VAETRISKRY 158


>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 469

 Score =  157 bits (396), Expect = 2e-36
 Identities = 82/142 (57%), Positives = 101/142 (71%), Gaps = 8/142 (5%)
 Frame = -1

Query: 403 SKIRPPPPSQ----PVIRVSNHIAHLGRPKEGPKPRQLISLPPFP-GHPLPGRKS---TS 248
           S   PPPP+     P+IRVSNH+A LG PK GPKPRQL+SLPPFP G  LPG+KS    +
Sbjct: 19  SSTSPPPPASAAPPPLIRVSNHVAKLGPPKAGPKPRQLLSLPPFPAGRHLPGKKSYHDGA 78

Query: 247 GQHVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDI 68
             HVTA+SWL+YYF +I    I++HFNKGL+QMEC  S G+          MRKI+PS++
Sbjct: 79  VSHVTAVSWLRYYFHEIDDAAIRSHFNKGLVQMECESSIGK---------HMRKIRPSEV 129

Query: 67  MEVGARVYAPVSVAESKISKRF 2
           ME GARVY  VS+AESK+S+RF
Sbjct: 130 MEEGARVYVAVSIAESKVSRRF 151


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
           sinensis]
          Length = 471

 Score =  155 bits (393), Expect = 4e-36
 Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
 Frame = -1

Query: 403 SKIRPPPPSQPVIRVSNH-IAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSGQHVTAI 227
           S+I PP P+  VIRVS   +AHLG PK GPKPRQL+SLPPFPGH LPG+      HVTA+
Sbjct: 19  SRISPPRPA--VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHNLPGKHWGRQGHVTAV 76

Query: 226 SWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIMEVGARV 47
           SW+KYYFD++   VIQ+HFNKGL+QMEC  + G     +GQ   +RKIK +++ME GAR+
Sbjct: 77  SWVKYYFDEVQDSVIQSHFNKGLVQMECA-NMGDSFVEQGQMKPIRKIKTNEVMEPGARI 135

Query: 46  YAPVSVAESKISKRF 2
           + PVS+ E +ISKR+
Sbjct: 136 FLPVSMVEGRISKRY 150


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
           gi|557538602|gb|ESR49646.1| hypothetical protein
           CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  155 bits (392), Expect = 5e-36
 Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
 Frame = -1

Query: 403 SKIRPPPPSQPVIRVSNH-IAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSGQHVTAI 227
           S+I PP P+  VIRVS   +AHLG PK GPKPRQL+SLPPFPGH LPG+      HVTA+
Sbjct: 19  SRISPPRPA--VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHNLPGKHWGRQCHVTAV 76

Query: 226 SWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIMEVGARV 47
           SW+KYYFD++   VIQ+HFNKGL+QMEC  + G     +GQ   +RKIK +++ME GAR+
Sbjct: 77  SWVKYYFDEVQDSVIQSHFNKGLVQMECA-NMGDSFVEQGQMKPIRKIKTNEVMEPGARI 135

Query: 46  YAPVSVAESKISKRF 2
           + PVS+ E +ISKR+
Sbjct: 136 FLPVSMVEGRISKRY 150


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  155 bits (391), Expect = 7e-36
 Identities = 76/141 (53%), Positives = 101/141 (71%), Gaps = 7/141 (4%)
 Frame = -1

Query: 403 SKIRPPPPSQPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKS-------TSG 245
           S++ PPP S  VIRV+N++AHLG PK+GP PRQLISLPPFPGHPLPG+ +        SG
Sbjct: 21  SRVAPPPSS--VIRVTNNVAHLGPPKQGPLPRQLISLPPFPGHPLPGKNAGADGDDGDSG 78

Query: 244 QHVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIM 65
            HVTAISW+KYYF++I    IQ HF KGL+QME    R      +   + MRKIK +++M
Sbjct: 79  GHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGAIPMRKIKHNEVM 138

Query: 64  EVGARVYAPVSVAESKISKRF 2
           ++G +++ PVS+AE +ISKR+
Sbjct: 139 QIGDKIWLPVSIAEMRISKRY 159


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudouridine synthase 3, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 3; AltName:
           Full=RNA-uridine isomerase 3; Flags: Precursor
           gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
           thaliana] gi|56790228|gb|AAW30031.1| At1g78910
           [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
           pseudourine synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  155 bits (391), Expect = 7e-36
 Identities = 76/141 (53%), Positives = 101/141 (71%), Gaps = 7/141 (4%)
 Frame = -1

Query: 403 SKIRPPPPSQPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKS-------TSG 245
           S++ PPP S  VIRV+N++AHLG PK+GP PRQLISLPPFPGHPLPG+ +        SG
Sbjct: 21  SRVAPPPSS--VIRVTNNVAHLGPPKQGPLPRQLISLPPFPGHPLPGKNAGADGDDGDSG 78

Query: 244 QHVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIM 65
            HVTAISW+KYYF++I    IQ HF KGL+QME    R      +   + MRKIK +++M
Sbjct: 79  GHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGAIPMRKIKHNEVM 138

Query: 64  EVGARVYAPVSVAESKISKRF 2
           ++G +++ PVS+AE +ISKR+
Sbjct: 139 QIGDKIWLPVSIAEMRISKRY 159


>ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X2 [Glycine max]
          Length = 449

 Score =  150 bits (378), Expect = 2e-34
 Identities = 77/140 (55%), Positives = 102/140 (72%), Gaps = 6/140 (4%)
 Frame = -1

Query: 403 SKIRPPPPS--QPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSG----Q 242
           S+I+PP P   +PVI VSN+IA L  PKEGPKPRQL+SLPPFPGHPLP + S SG     
Sbjct: 22  SRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSSISGSRQRD 81

Query: 241 HVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIME 62
           +VTA++W+KYYF      VI++HF +GL+QME  DS  Q    + Q   MRKI+P+++M+
Sbjct: 82  YVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSSTQ---KEEQMKPMRKIRPNEVMK 138

Query: 61  VGARVYAPVSVAESKISKRF 2
            GARV+ PVS+ E++ISKR+
Sbjct: 139 RGARVHVPVSICETRISKRY 158


>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Glycine max]
          Length = 476

 Score =  150 bits (378), Expect = 2e-34
 Identities = 77/140 (55%), Positives = 102/140 (72%), Gaps = 6/140 (4%)
 Frame = -1

Query: 403 SKIRPPPPS--QPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSG----Q 242
           S+I+PP P   +PVI VSN+IA L  PKEGPKPRQL+SLPPFPGHPLP + S SG     
Sbjct: 22  SRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSSISGSRQRD 81

Query: 241 HVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIME 62
           +VTA++W+KYYF      VI++HF +GL+QME  DS  Q    + Q   MRKI+P+++M+
Sbjct: 82  YVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSSTQ---KEEQMKPMRKIRPNEVMK 138

Query: 61  VGARVYAPVSVAESKISKRF 2
            GARV+ PVS+ E++ISKR+
Sbjct: 139 RGARVHVPVSICETRISKRY 158


>ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
           X2 [Cicer arietinum]
          Length = 360

 Score =  150 bits (378), Expect = 2e-34
 Identities = 79/140 (56%), Positives = 99/140 (70%), Gaps = 6/140 (4%)
 Frame = -1

Query: 403 SKIRPPPPS--QPVIRVSNHIAHLGRPKEGPKPRQLISLPPFPGHPLPGRKSTSG----Q 242
           S+IRPP P   + VIRVSN+IA L  PKEGPKPRQL+SLPPFP HPLPG+ STS      
Sbjct: 22  SRIRPPKPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPCHPLPGKNSTSAPGKRD 81

Query: 241 HVTAISWLKYYFDDIPPPVIQNHFNKGLIQMECLDSRGQLGCYKGQTVSMRKIKPSDIME 62
           HVTA++W+KYYF      VI++HF +GL+QME L         K     MRKI+P+++M+
Sbjct: 82  HVTAVNWIKYYFKGTSGSVIESHFREGLVQMEDLIVDDSFKQKKELMKPMRKIRPNEVMK 141

Query: 61  VGARVYAPVSVAESKISKRF 2
            GARV+  VS+AE+KISKRF
Sbjct: 142 PGARVHVSVSMAETKISKRF 161