BLASTX nr result

ID: Rehmannia26_contig00031248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00031248
         (487 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    62   2e-10
emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    66   5e-09
ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S...    61   7e-08

>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 62.0 bits (149), Expect(2) = 2e-10
 Identities = 36/77 (46%), Positives = 39/77 (50%)
 Frame = -1

Query: 232 SGGHLLQRKHHCSPPPEKQKIRESRLKIHA*IVV*CQGRRRKLGTEPYEAEVSRTVL*EG 53
           +GGHL QRK HCSPPP+KQKIRES                                    
Sbjct: 294 TGGHLPQRKLHCSPPPDKQKIRES------------------------------------ 317

Query: 52  SGYLLELRPTTTGQFRF 2
           SGYLLELRPTTTG+FRF
Sbjct: 318 SGYLLELRPTTTGKFRF 334



 Score = 28.9 bits (63), Expect(2) = 2e-10
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -2

Query: 264 PLVRLASERFFRA 226
           PLVRLASERFFRA
Sbjct: 275 PLVRLASERFFRA 287


>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 42/83 (50%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
 Frame = +1

Query: 265 GPIWRHTENHAFRTERKARLQNQXXXXXXXXXXXXRPVEHM*GTVGL---------LTQR 417
           GPI RHTENHAFRTER ARL                P +   G VG          L  R
Sbjct: 96  GPIRRHTENHAFRTERNARL----------------PKKKKNGLVGKRSAACRAHQLILR 139

Query: 418 ISHQELAGDDRGSNPPAVAGRLF 486
              QEL GDDRG+NPPAVAGRLF
Sbjct: 140 SPRQELPGDDRGTNPPAVAGRLF 162


>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
           gi|241931727|gb|EES04872.1| hypothetical protein
           SORBIDRAFT_04g009491 [Sorghum bicolor]
          Length = 289

 Score = 60.8 bits (146), Expect(2) = 7e-08
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +3

Query: 141 YACIFSLDSRIFCFSGGGEQWCLRCSRCPP 230
           YAC+F LDSRIFCFSGGGEQ  LRC RCPP
Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPP 268



 Score = 21.2 bits (43), Expect(2) = 7e-08
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 LALDHYLCMY 151
           L+LDHY C++
Sbjct: 234 LSLDHYACLF 243


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