BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00031197
         (567 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623...    88   1e-15
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617...    87   2e-15
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    85   1e-14
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    85   1e-14
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    83   5e-14
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A...    80   4e-13
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...    80   4e-13
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617...    79   6e-13
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    79   8e-13
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...    78   2e-12
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612...    77   2e-12
gb|ESW30650.1| hypothetical protein PHAVU_002G171400g [Phaseolus...    77   4e-12
gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [...    77   4e-12
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    76   7e-12
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    75   1e-11
ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629...    73   4e-11
ref|XP_004292479.1| PREDICTED: putative ribonuclease H protein A...    73   6e-11
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    73   6e-11
gb|AFK38936.1| unknown [Medicago truncatula]                           72   7e-11
ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thalia...    71   2e-10

>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
          Length = 441

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
 Frame = +3

Query: 6   FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
           F WR + + LPT  NL RR +   P C  C   +    H    C +A++VW  AG  E +
Sbjct: 137 FMWRAVKNLLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEI 196

Query: 186 HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
               QQ L   L ++     K  +EL + LC  IWY RN F+FE +       +  A   
Sbjct: 197 EKLVQQDLMAVLVEIQRKKGKKELELIVVLCWTIWYSRNLFIFENKREDSQLSIARAEAN 256

Query: 366 LTSFQSSNLWPERPVHALSDMELMRR------PPDGTC-IYFDGAISLKENCAGIGIYIR 524
           L SF+      ++P   + + +   R      PP G   I  D A+++K+  AG+G+ IR
Sbjct: 257 LDSFRRI----KKPSSKILEKQQRNRKQVWNPPPCGWFKINVDAAVNVKDQIAGLGVIIR 312

Query: 525 SRQGSFI 545
           +  G  +
Sbjct: 313 NSNGEVV 319


>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
          Length = 1238

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
 Frame = +3

Query: 6    FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
            F WR + + LPT  NL RR +   P C  C   +    H    C +A++VW  AG  E +
Sbjct: 934  FMWRAVKNLLPTASNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEI 993

Query: 186  HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
                QQ L   L ++     K  +EL + LC  IWY +N F+FE +       +  A   
Sbjct: 994  EKLVQQDLMAVLVEIQRKKGKKELELIVVLCWTIWYSQNLFIFENKREDSQLSIARAEAN 1053

Query: 366  LTSFQSSNLWPERPVHALSDMELMRR------PPDGTC-IYFDGAISLKENCAGIGIYIR 524
            + SF+      ++P   + + +   R      PP G   I  D A+++K+  AG+G+ IR
Sbjct: 1054 MDSFKRI----KKPFSKILEKQQRNRKQVWNPPPSGWFKINVDAAVNVKDQIAGLGVIIR 1109

Query: 525  SRQGSFI 545
            +  G  +
Sbjct: 1110 NSNGEVV 1116


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
 Frame = +3

Query: 6    FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
            F WR   D LPT +NL +R +   P C  C++   +  H  F C  +R++W +    E V
Sbjct: 465  FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEV 524

Query: 186  HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
               + + +   L  L D   K  +EL + +C  IW+ RN F+F+ +       V  A   
Sbjct: 525  KALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAI 584

Query: 366  LTSFQSSNLWPERPVHALSDMELM-----RRPPDGTC-IYFDGAISLKENCAGIGIYIRS 527
            + S++   + P+  + A SD +L+     + PP G   +  D AI L+    G+GI IR+
Sbjct: 585  VQSYKRIQM-PQ--LQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRN 641

Query: 528  RQGSFIKGLSK 560
             +G FI    K
Sbjct: 642  SEGKFITAAIK 652


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
 Frame = +3

Query: 6    FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
            F WR   D LPT +NL +R +   P C  C++   +  H  F C  +R++W +    E V
Sbjct: 668  FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEV 727

Query: 186  HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
               + + +   L  L D   K  +EL + +C  IW+ RN F+F+ +       V  A   
Sbjct: 728  KALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAI 787

Query: 366  LTSFQSSNLWPERPVHALSDMELM-----RRPPDGTC-IYFDGAISLKENCAGIGIYIRS 527
            + S++   + P+  + A SD +L+     + PP G   +  D AI L+    G+GI IR+
Sbjct: 788  VQSYKRIQM-PQ--LQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRN 844

Query: 528  RQGSFIKGLSK 560
             +G FI    K
Sbjct: 845  SEGKFITAAIK 855


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
 Frame = +3

Query: 6    FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
            F WR   D LPT +NL +R +   P C  C++   +  H  F C  +R++W +    E V
Sbjct: 465  FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEV 524

Query: 186  HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
               + + +   L  L D   K  +EL + +C  IW+ RN F+F+ +       V  A   
Sbjct: 525  KALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAI 584

Query: 366  LTSFQSSNLWPERPVHALSDMELM-----RRPPDGTC-IYFDGAISLKENCAGIGIYIRS 527
            + S++   + P+  + A S+ +L+     + PP G   +  D AI L+    G+GI IR+
Sbjct: 585  VQSYKRIQM-PQ--LQAFSNQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRN 641

Query: 528  RQGSFIKGLSK 560
             +G FI    K
Sbjct: 642  SEGKFITAAIK 652


>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 335

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 4/191 (2%)
 Frame = +3

Query: 6   FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
           F W+   + LPT +NL +R +  +  C  C     +  H+   C  A++VW  + + + V
Sbjct: 32  FVWKATKNLLPTAENLCKRGIVQEAHCKRCGNKVENILHVLVTCKAAKKVWQRSPVADAV 91

Query: 186 HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
           H     +L   L  L      +  EL L L   IWY RNKFVFEG    P   V  A   
Sbjct: 92  HKIDSSNLFGELTKLQRSLSNDDFELLLVLLWIIWYARNKFVFEGMKIDPGISVAKAEAI 151

Query: 366 LTSFQSSNLWPERPVHALSDMELMRR----PPDGTCIYFDGAISLKENCAGIGIYIRSRQ 533
             +++ +  +PE  V   S  +   +    PP    I  D AI  K  C+G+G  I+   
Sbjct: 152 KEAYKRTQ-FPEMLVGKNSLRQEQNKWAPPPPRWVKINVDAAIDAKSKCSGLGAVIKDPS 210

Query: 534 GSFIKGLSKKI 566
           G       K +
Sbjct: 211 GKCFVAAVKSV 221


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
 Frame = +3

Query: 6    FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
            F WR   + LPT +NL +R    DP C  C     +  H    C  AR++WY A     +
Sbjct: 1031 FMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQI 1090

Query: 186  HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
             + + Q +  ++ ++     K   E ++  C  IW+ RNK +FEG+   P +    A   
Sbjct: 1091 SNAQNQDILEFIYEVWSTWGKTKAEQTIAFCWAIWFARNKRIFEGKKSDPRASAAKAESL 1150

Query: 366  LTSFQSSNLWPERPVHALSDMELMR-RPPDGTC--IYFDGAISLKENCAGIGIYIRSRQG 536
            L ++  +       +H +  +   +  PP G    +  D AI+ ++  AG+G  I+   G
Sbjct: 1151 LEAYHRARKPDASHIHNVKRIVQKKWEPPPGNFLKVNVDAAINNRDQVAGLGAVIKDPSG 1210

Query: 537  SFIKGLSKKI 566
              +   +K++
Sbjct: 1211 KIVAAGTKQV 1220


>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
          Length = 440

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
 Frame = +3

Query: 3   HFAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEP 182
           HF WR LTD LPT +NLL++++   P C  C A+  S  HI   CP AR  W  + I   
Sbjct: 137 HFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHILLQCPFARTCWMTSSI--- 193

Query: 183 VHHFRQQS-LHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAG 359
              F   S L LWL  L +       +L++ +C  +W  RN  V+ G+      ++ SAG
Sbjct: 194 -GFFGDGSNLLLWLEALFNRYSLEQTQLAVMICWSLWQNRNDMVWRGKTSGVQQLLNSAG 252

Query: 360 LTLTSFQ 380
             L  +Q
Sbjct: 253 HFLFQWQ 259


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
 Frame = +3

Query: 6    FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
            F WR L + LPT +NL +R    +P C  C+    + +H+   C  AR++W +A ++   
Sbjct: 1148 FMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQP 1207

Query: 186  HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
                 Q     ++++   +     EL +  C  IW  RNKF+FEG+      +   A   
Sbjct: 1208 SKDHNQDFFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSV 1267

Query: 366  LTSFQSSNLWPERPVHALSDMELMR---RPPDGTCIYF--DGAISLKENCAGIGIYIRSR 530
            L ++Q   +     VH   D  + +   +PP    +    D A+S K+   G+G  +R  
Sbjct: 1268 LKAYQ--RVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDA 1325

Query: 531  QGSFI 545
            +G  +
Sbjct: 1326 EGKIL 1330


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 765

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 5/185 (2%)
 Frame = +3

Query: 6    FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
            F WR L + LPT +NL +R    +P C  C+    + +H+   C  AR++W +A ++   
Sbjct: 461  FMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQP 520

Query: 186  HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
                 Q     ++++   +     EL +  C  IW  RNKF+FEG+      +   A   
Sbjct: 521  SKDHNQDFFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSV 580

Query: 366  LTSFQSSNLWPERPVHALSDMELMR---RPPDGTCIYF--DGAISLKENCAGIGIYIRSR 530
            L ++Q   +     VH   D  + +   +PP    +    D A+S K    G+G  +R  
Sbjct: 581  LKAYQ--RVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKXQKVGLGAIVRDA 638

Query: 531  QGSFI 545
            +G  +
Sbjct: 639  EGKIL 643


>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
          Length = 589

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
 Frame = +3

Query: 6   FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
           F W+   + LP  +NL RR +  +PTC LC+A      H    C +AR++W    +   V
Sbjct: 286 FVWKATKNLLPMAENLWRRKVLKEPTCHLCKAGCEDVFHALMECRVARKIWKCTHLENEV 345

Query: 186 HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
               ++ +   +   +++  K+ V+   T+    W+ RNK +F+G+   P+  V      
Sbjct: 346 KSVIREDMLSVMIGAMNNWAKSEVDYVATIWWVAWHARNKLLFQGKKLDPIGSVAKGKTV 405

Query: 366 LTSFQSSNLWPERPVH---ALSDMELMRRPPDGTC-IYFDGAISLKENCAGIGIYIRSRQ 533
           +  +Q+  +  ER  H       M++   PP+    +  D A+      AG+G+ IR+ +
Sbjct: 406 MEVYQAQQV-KERESHRNTVKGKMQIWTPPPNNKVKVNVDAAVKEDRKSAGLGVVIRNHR 464

Query: 534 GSFIKGLSKKI 566
           G  +    K +
Sbjct: 465 GQVLAAAVKSM 475


>gb|ESW30650.1| hypothetical protein PHAVU_002G171400g [Phaseolus vulgaris]
          Length = 1235

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
 Frame = +3

Query: 12   WRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPVHH 191
            W I  D LPT + L RR L   P CP+C     +  H+F  CP  R +W+ +     V  
Sbjct: 1117 WNICRDDLPTFEYLFRRKLVISPLCPICGTEPETVEHVFLFCPWTRPLWFGSDFQWRVDV 1176

Query: 192  FRQQSLHLWLRDLIDDA----PKNIVELSL---TLCNGIWYGRNKFVFEGQPFTPV 338
               QS  LWL   + +     P+N  ++S    ++C  IW GRN+FV EG+P  P+
Sbjct: 1177 KEVQSFQLWLWHKLMEIQRVYPENANQISAQVGSICWSIWKGRNEFVLEGKPVDPL 1232


>gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
          Length = 509

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
 Frame = +3

Query: 6   FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
           F WRIL++++ T  NL +R +   P CP+C+  + S  H+F  CP    VW+ + +   V
Sbjct: 253 FCWRILSNAIATKLNLFKRKISQSPMCPVCENNEESVEHLFLLCPWTAAVWFGSPLNYRV 312

Query: 186 HHFRQQSLHLWLRDL-------IDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSI 344
           H+    +   WL  +       I D  + +  +S  L   IW  R KFV EG+   P+ +
Sbjct: 313 HNQSITTFDNWLNSMFQLNLTSILDRNRLMTIISFILWE-IWKARCKFVIEGRQLHPIHV 371

Query: 345 VISAGLTLTSFQSSNLWPERPVHA----LSDMELMRRPPDG-TCIYFDGAISLKENCAGI 509
           +  A      F  +N+   +  H+    L        P DG   +  D A   + N + +
Sbjct: 372 LHQAMRAANEFIEANV--SQSTHSDYVTLISTRAWTPPSDGFVKVNTDAAWIKESNRSAV 429

Query: 510 GIYIRSRQGSFIKGLSKK 563
           G+ IR   G+ ++G  +K
Sbjct: 430 GVVIRDSAGN-VRGAKRK 446


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
 Frame = +3

Query: 3    HFAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEP 182
            HF W+ L+  L T Q L  RH+  +  CP C A + S  H+ F CP +RQ+W ++ I   
Sbjct: 937  HFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSS 996

Query: 183  VHHFRQQSL-----HLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIV 347
             + F + SL      L  R    D  ++I+E+   +   IW  RN+F+FE    +P  I+
Sbjct: 997  EYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVIL 1056

Query: 348  ISAGLTLTSFQSSNLWPERPVHALS------DMELMRRPPDGTCIYFDGAISLKENCAGI 509
              A       Q +N+W +     ++       +     PP      FD +  LK+  +G 
Sbjct: 1057 DFA------IQEANVWKQANSKEVATEYPPPQVVPANLPPTRNVCQFDASWHLKDTLSGH 1110

Query: 510  G 512
            G
Sbjct: 1111 G 1111


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
 Frame = +3

Query: 6    FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
            F WRIL+ +LP    ++RR +P DP C +C     S  H+ F C LARQVW ++G+    
Sbjct: 1060 FLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPTSQ 1119

Query: 186  HHFRQQSLHLWLRDLIDDAPKNIVELSLT-----LCNGIWYGRNKFVFEGQPFTPVSIV 347
              F+  S+   ++ L++   K ++   +      +   +W  R+K  FEG  F+P+  +
Sbjct: 1120 FGFQNSSIFANIQYLLELKGKGLIPEQIKKSWPWVLWRLWKNRDKLFFEGTIFSPLKSI 1178


>ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629934 [Citrus sinensis]
          Length = 304

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
 Frame = +3

Query: 12  WRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPVHH 191
           WR   + L T +NL +R +   P C  C+ T  +  H+ F C +++Q+W +   +     
Sbjct: 2   WRAAKNLLATAENLWKRKVVQFPWCQRCKKTRETVCHMLFECKVSKQIWRLTPFVVDSQL 61

Query: 192 FRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLTLT 371
            + + +   L+DL     K  +EL + +C  IW+ RN  +F+ +       V +A   + 
Sbjct: 62  GKVRDVFSLLQDLTTKRTKAEMELIVAVCWSIWHSRNLAIFKNKREDSHLSVAAAEALVQ 121

Query: 372 SFQSSNL--WPERPVHALSDMELMRRPPDGTC-IYFDGAISLKENCAGIGIYIRSRQGSF 542
           S++   +    + P  +L+  +    PP+G   +  D A+ +++   G+GI IR+ +G  
Sbjct: 122 SYKRIQMPQMSKSPPTSLAIQQKWSYPPEGWFKVNVDAAVKMEQQRTGLGIVIRNSEGKV 181

Query: 543 IKGLSK 560
           +    K
Sbjct: 182 MAAAMK 187


>ref|XP_004292479.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 473

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
 Frame = +3

Query: 6   FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
           F W+ ++ ++ T +N+  R L   P CP+C A + S+ H+   CP A  VW+ + +   +
Sbjct: 267 FLWKAISGAIATFKNMFIRKLASTPLCPICGAYEESNEHMLLLCPWAEAVWFGSSLGLKI 326

Query: 186 HHFRQQSLHLWLRDL--IDDAPKNIVELSLT--LCNGIWYGRNKFVFEGQPFTPVSIVIS 353
           +     +L  WL+++    ++   I  L++   +C  IW  R  FV++ +P +P +++ S
Sbjct: 327 NKNHISTLDSWLKEICKAHNSQDRIWVLTMVGCICWSIWKSRCSFVYDRRPISPPAVIQS 386

Query: 354 AGLTLTSFQSSNLW--PERPVHALSDMELMRRPPDGTCIYFDGAISLKENCAGIGIYIRS 527
           +      F S+N    P     A S       P D   +  D A  ++    G+G+ IRS
Sbjct: 387 SLNLALEFWSANRKDPPSLESEARSRKRWQPPPLDVVDVCCD-ASWIESGSCGMGVVIRS 445

Query: 528 RQGSFI 545
             G  +
Sbjct: 446 NFGELV 451


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1138

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
 Frame = +3

Query: 6    FAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGILEPV 185
            F WRIL+ +LP    ++RR +  DP C +C     S  H+ F C +ARQVW ++G+  P 
Sbjct: 834  FLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGVPTPE 893

Query: 186  HHFRQQSLHLWLRDLIDDAPKNIVELSLT------LCNGIWYGRNKFVFEGQPFTPV-SI 344
              F+  S+   ++ L  +  K I+   L       +   +W  RNK  F+G  F P+ SI
Sbjct: 894  FGFQNASIFANIQFLF-ELKKMILVPDLVKRSWPWVLWRLWKNRNKLFFDGITFCPLNSI 952

Query: 345  VISAGLTLTSFQSSN----LWPERPVHALSDMELMRRPPDG--TCIYFDGAISLKENCAG 506
            V     TL  FQ+ +       E     +        PP+G   C         K+ C G
Sbjct: 953  VKIQEDTLEWFQAQSQIRVSESEEGQRVIPFTHSWEPPPEGWVKCNIGSAWSGKKKVCGG 1012

Query: 507  IGIYIRSRQGSFI 545
              + +R   GS I
Sbjct: 1013 AWV-LRDEHGSVI 1024


>gb|AFK38936.1| unknown [Medicago truncatula]
          Length = 297

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
 Frame = +3

Query: 12  WRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMA--GILEPV 185
           WR+  + +PT  NL RR +  D  CPLC   D S  H+F  CP+  QVW+ +  G   P 
Sbjct: 2   WRLARNIIPTRCNLRRRGVVLDTVCPLCFDADESSNHLFMACPMTLQVWFASPLGFQPP- 60

Query: 186 HHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVISAGLT 365
               Q  L+ WL+  +       V+L       IW+ RN+ +F    F P  +  SA   
Sbjct: 61  ---PQTDLNAWLQSWLSAKEPLAVQLFCVCLWKIWFFRNQAIFNQVVFEPRMVAASAHDF 117

Query: 366 LTSFQSSNLWPERPVHAL 419
           ++ F  +N  P R V  L
Sbjct: 118 VSEFNLAN--PTRSVDRL 133


>ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thaliana]
           gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
           protein [Arabidopsis thaliana]
           gi|332643482|gb|AEE77003.1| ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
 Frame = +3

Query: 3   HFAWRILTDSLPTPQNLLRRHLPCDPTCPLCQATDVSDTHIFFHCPLARQVWYMAGI--- 173
           HF W++L+ +L T  NL RRH+   P C  C   D +  H+FF C  A+QVW  +GI   
Sbjct: 29  HFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQQVWRASGIPHQ 88

Query: 174 -LEPVHHFRQQSLHLWLRDLIDDAPKNIVELSLTLCNGIWYGRNKFVFEGQPFTPVSIVI 350
            L       +  + L L   + +    +  L++ +   +W  RN+ VF+ +  +  + + 
Sbjct: 89  ELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQQKSISWQNTLQ 148

Query: 351 SAGLTLTSFQSSNLWPE---RPVHALSDME------LMRRPPDGTCIY-FDGAISLKENC 500
            A   +  ++ +N + +   + VH+    +        +RPP     Y +DGA + +   
Sbjct: 149 RARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWIKYNYDGAFNHQTRN 208

Query: 501 AGIGIYIRSRQGSFI 545
           A  G  +R   G ++
Sbjct: 209 AKAGWLMRDENGVYM 223