BLASTX nr result
ID: Rehmannia26_contig00030285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00030285
(454 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006576518.1| replication protein 1a [Amazon lily mild mot... 143 3e-32
gb|AHJ89005.1| putative replicase [Cassava Ivorian bacilliform v... 133 3e-29
ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus] g... 82 1e-13
ref|NP_613278.1| 1a protein [Cowpea chlorotic mottle virus] gi|1... 81 2e-13
gb|AEI54612.1| 1a protein [Cowpea chlorotic mottle virus] 81 2e-13
gb|AEI54608.1| 1a protein [Cowpea chlorotic mottle virus] 81 2e-13
gb|AAN37631.1| 1a protein [Cowpea chlorotic mottle virus] 81 2e-13
gb|AAN37635.1| 1a protein [Cowpea chlorotic mottle virus] 81 2e-13
ref|NP_041196.1| replicase [Brome mosaic virus] gi|137251|sp|P03... 80 3e-13
emb|CAA41361.1| 1a protein [Brome mosaic virus] 80 3e-13
gb|ADW09019.1| replication protein 1a [Brome mosaic virus] 80 3e-13
dbj|BAJ41520.1| 1a protein [Brome mosaic virus] 80 3e-13
gb|ABF83485.1| 1a [Brome mosaic virus] 80 3e-13
ref|NP_689392.1| 1a protein [Spring beauty latent virus] gi|2253... 79 5e-13
ref|NP_659000.1| 1a protein [Broad bean mottle virus] gi|401312|... 77 2e-12
ref|NP_620760.1| 1a protein [Tomato aspermy virus] gi|137257|sp|... 76 4e-12
gb|AHA10984.1| 1a protein [Tomato aspermy virus] 76 4e-12
gb|AGN56156.1| 1a protein [Cucumber mosaic virus] 76 4e-12
gb|AGN56146.1| 1a protein [Cucumber mosaic virus] 76 4e-12
gb|AGN56136.1| 1a protein [Cucumber mosaic virus] 76 4e-12
>ref|YP_006576518.1| replication protein 1a [Amazon lily mild mottle virus]
gi|398650492|dbj|BAM34543.1| replication protein 1a
[Amazon lily mild mottle virus]
Length = 945
Score = 143 bits (360), Expect = 3e-32
Identities = 70/76 (92%), Positives = 73/76 (96%)
Frame = -2
Query: 453 HLNMSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGL 274
HL+MSEKIKTVHEAQGISVP+VRLVRLKNTKCDLFSAEAHCLVALTRHTR FEYLRVPGL
Sbjct: 869 HLDMSEKIKTVHEAQGISVPRVRLVRLKNTKCDLFSAEAHCLVALTRHTRCFEYLRVPGL 928
Query: 273 KGDLIEEACKASLSLQ 226
KGDLIEEACK S+ LQ
Sbjct: 929 KGDLIEEACKTSMVLQ 944
>gb|AHJ89005.1| putative replicase [Cassava Ivorian bacilliform virus]
Length = 943
Score = 133 bits (334), Expect = 3e-29
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = -2
Query: 447 NMSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKG 268
+++E IKTVHE QG+SVPKVRLVRLKNTKCDLFSAEAHCLVALTRHT++FEYLRVPGLK
Sbjct: 868 DVNEMIKTVHEGQGLSVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTQKFEYLRVPGLKN 927
Query: 267 DLIEEACKASLSLQV 223
DLIE+ACKAS+SLQ+
Sbjct: 928 DLIEKACKASMSLQL 942
>ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus]
gi|259651322|dbj|BAI40161.1| 1a protein [Melandrium
yellow fleck virus]
Length = 948
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/66 (65%), Positives = 48/66 (72%)
Frame = -2
Query: 444 MSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGD 265
+ IKTVHEAQGISV V LVRLK+TKCDLF E +CLVA+TRH R FEY L GD
Sbjct: 882 IENNIKTVHEAQGISVDNVVLVRLKSTKCDLFKHEEYCLVAMTRHKRSFEYCYNGKLSGD 941
Query: 264 LIEEAC 247
LI +AC
Sbjct: 942 LI-DAC 946
>ref|NP_613278.1| 1a protein [Cowpea chlorotic mottle virus]
gi|137252|sp|P27752.1|ORF1A_CCMV RecName:
Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|331599|gb|AAA46369.1| 1a
protein [Cowpea chlorotic mottle virus]
Length = 958
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = -2
Query: 444 MSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGD 265
+ + IKTVHEAQG+SV LVRLK+TKCDLF E +CLVALTRH FEYL V L GD
Sbjct: 892 IEKHIKTVHEAQGVSVDHAVLVRLKSTKCDLFKTEEYCLVALTRHKITFEYLYVGMLSGD 951
Query: 264 LI 259
LI
Sbjct: 952 LI 953
>gb|AEI54612.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = -2
Query: 444 MSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGD 265
+ + IKTVHEAQG+SV LVRLK+TKCDLF E +CLVALTRH FEYL V L GD
Sbjct: 893 IEKHIKTVHEAQGVSVDHAVLVRLKSTKCDLFKTEEYCLVALTRHKVTFEYLYVGMLSGD 952
Query: 264 LI 259
LI
Sbjct: 953 LI 954
>gb|AEI54608.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = -2
Query: 444 MSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGD 265
+ + IKTVHEAQG+SV LVRLK+TKCDLF E +CLVALTRH FEYL V L GD
Sbjct: 893 IEKHIKTVHEAQGVSVDHAVLVRLKSTKCDLFKTEEYCLVALTRHKITFEYLYVGMLSGD 952
Query: 264 LI 259
LI
Sbjct: 953 LI 954
>gb|AAN37631.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = -2
Query: 444 MSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGD 265
+ + IKTVHEAQG+SV LVRLK+TKCDLF E +CLVALTRH FEYL V L GD
Sbjct: 893 IEKHIKTVHEAQGVSVDHAVLVRLKSTKCDLFKTEEYCLVALTRHKVTFEYLYVGMLSGD 952
Query: 264 LI 259
LI
Sbjct: 953 LI 954
>gb|AAN37635.1| 1a protein [Cowpea chlorotic mottle virus]
Length = 959
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = -2
Query: 444 MSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGD 265
+ + IKTVHEAQG+SV LVRLK+TKCDLF E +CLVALTRH FEYL V L GD
Sbjct: 893 IEKHIKTVHEAQGVSVDHAVLVRLKSTKCDLFKTEEYCLVALTRHKITFEYLYVGMLSGD 952
Query: 264 LI 259
LI
Sbjct: 953 LI 954
>ref|NP_041196.1| replicase [Brome mosaic virus] gi|137251|sp|P03588.1|ORF1A_BMV
RecName: Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|58729|emb|CAA26228.1| unnamed
protein product [Brome mosaic virus]
Length = 961
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/63 (66%), Positives = 45/63 (71%)
Frame = -2
Query: 432 IKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGDLIEE 253
IKTVHEAQGISV V LVRLK+TKCDLF E +CLVALTRH + FEY L GDLI
Sbjct: 899 IKTVHEAQGISVDNVTLVRLKSTKCDLFKHEEYCLVALTRHKKSFEYCFNGELAGDLIFN 958
Query: 252 ACK 244
K
Sbjct: 959 CVK 961
>emb|CAA41361.1| 1a protein [Brome mosaic virus]
Length = 961
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/63 (66%), Positives = 45/63 (71%)
Frame = -2
Query: 432 IKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGDLIEE 253
IKTVHEAQGISV V LVRLK+TKCDLF E +CLVALTRH + FEY L GDLI
Sbjct: 899 IKTVHEAQGISVDNVTLVRLKSTKCDLFKHEEYCLVALTRHKKSFEYCFNGELAGDLIFN 958
Query: 252 ACK 244
K
Sbjct: 959 CVK 961
>gb|ADW09019.1| replication protein 1a [Brome mosaic virus]
Length = 961
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/63 (66%), Positives = 45/63 (71%)
Frame = -2
Query: 432 IKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGDLIEE 253
IKTVHEAQGISV V LVRLK+TKCDLF E +CLVALTRH + FEY L GDLI
Sbjct: 899 IKTVHEAQGISVDNVTLVRLKSTKCDLFKHEEYCLVALTRHKKSFEYCFNGELAGDLIFN 958
Query: 252 ACK 244
K
Sbjct: 959 CVK 961
>dbj|BAJ41520.1| 1a protein [Brome mosaic virus]
Length = 961
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/63 (66%), Positives = 45/63 (71%)
Frame = -2
Query: 432 IKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGDLIEE 253
IKTVHEAQGISV V LVRLK+TKCDLF E +CLVALTRH + FEY L GDLI
Sbjct: 899 IKTVHEAQGISVDNVTLVRLKSTKCDLFKHEEYCLVALTRHKKSFEYCFNGELAGDLIFN 958
Query: 252 ACK 244
K
Sbjct: 959 CVK 961
>gb|ABF83485.1| 1a [Brome mosaic virus]
Length = 961
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/63 (66%), Positives = 45/63 (71%)
Frame = -2
Query: 432 IKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGDLIEE 253
IKTVHEAQGISV V LVRLK+TKCDLF E +CLVALTRH + FEY L GDLI
Sbjct: 899 IKTVHEAQGISVDNVALVRLKSTKCDLFKHEEYCLVALTRHKKSFEYCFNGELAGDLIFN 958
Query: 252 ACK 244
K
Sbjct: 959 CVK 961
>ref|NP_689392.1| 1a protein [Spring beauty latent virus] gi|22531640|dbj|BAC10645.1|
1a protein [Spring beauty latent virus]
Length = 958
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = -2
Query: 444 MSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGD 265
+ + IKTVHEAQG+SV V LVRLK+ KCDLF E +CLV LTRH R FEYL L GD
Sbjct: 891 VDKHIKTVHEAQGVSVDHVVLVRLKSVKCDLFKTEEYCLVGLTRHKRTFEYLYNGDLGGD 950
Query: 264 LI 259
LI
Sbjct: 951 LI 952
>ref|NP_659000.1| 1a protein [Broad bean mottle virus] gi|401312|sp|Q00020.1|ORF1A_BBMV
RecName: Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|210663|gb|AAA42740.1| 1a
protein [Broad bean mottle virus]
Length = 966
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = -2
Query: 444 MSEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGD 265
+ ++TVHEAQG +V V LVRLK+TKCDLF +E +CLVALTRH R FEYL L GD
Sbjct: 900 VESNMETVHEAQGKAVDHVVLVRLKSTKCDLFKSEEYCLVALTRHKRTFEYLYNGDLGGD 959
Query: 264 LI 259
LI
Sbjct: 960 LI 961
>ref|NP_620760.1| 1a protein [Tomato aspermy virus] gi|137257|sp|P28931.1|ORF1A_TAV
RecName: Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|222673|dbj|BAA00936.1| ORF
[Tomato aspermy virus]
Length = 993
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/71 (57%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Frame = -2
Query: 450 LNMSE-----KIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLR 286
LNMS +IKT HE+QG+S V LVRLK TKCDLF A +CLVA+TRH + F Y
Sbjct: 918 LNMSNDFIEHRIKTTHESQGVSEDHVTLVRLKTTKCDLFKAFKYCLVAVTRHKKTFRYEH 977
Query: 285 VPGLKGDLIEE 253
V L GDLI E
Sbjct: 978 VGKLDGDLIAE 988
>gb|AHA10984.1| 1a protein [Tomato aspermy virus]
Length = 993
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/71 (57%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Frame = -2
Query: 450 LNMSE-----KIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLR 286
LNMS +IKT HE+QG+S V LVRLK TKCDLF A +CLVA+TRH + F Y
Sbjct: 918 LNMSNDFIEHRIKTTHESQGVSEDHVTLVRLKTTKCDLFKAFKYCLVAVTRHKKTFRYEH 977
Query: 285 VPGLKGDLIEE 253
V L GDLI E
Sbjct: 978 VGKLDGDLIAE 988
>gb|AGN56156.1| 1a protein [Cucumber mosaic virus]
Length = 993
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/63 (61%), Positives = 45/63 (71%)
Frame = -2
Query: 441 SEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGDL 262
+E+IKTVHE+QGIS V LVRLK+TKCDLF ++CLVALTRH F Y L GDL
Sbjct: 926 NERIKTVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGALNGDL 985
Query: 261 IEE 253
I E
Sbjct: 986 IAE 988
>gb|AGN56146.1| 1a protein [Cucumber mosaic virus]
Length = 993
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/63 (61%), Positives = 45/63 (71%)
Frame = -2
Query: 441 SEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGDL 262
+E+IKTVHE+QGIS V LVRLK+TKCDLF ++CLVALTRH F Y L GDL
Sbjct: 926 NERIKTVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGALNGDL 985
Query: 261 IEE 253
I E
Sbjct: 986 IAE 988
>gb|AGN56136.1| 1a protein [Cucumber mosaic virus]
Length = 993
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/63 (61%), Positives = 45/63 (71%)
Frame = -2
Query: 441 SEKIKTVHEAQGISVPKVRLVRLKNTKCDLFSAEAHCLVALTRHTRRFEYLRVPGLKGDL 262
+E+IKTVHE+QGIS V LVRLK+TKCDLF ++CLVALTRH F Y L GDL
Sbjct: 926 NERIKTVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGALNGDL 985
Query: 261 IEE 253
I E
Sbjct: 986 IAE 988