BLASTX nr result

ID: Rehmannia26_contig00030261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00030261
         (476 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32913.3| unnamed protein product [Vitis vinifera]               60   4e-07
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    60   4e-07

>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
 Frame = +2

Query: 2   TLVDLRLNCHARIPMSGVVYLSALKKLQLNFVDYXXXXXXXXXXYGCPVLQVLIIDIVSL 181
           TLV ++L+C   + +   V+L +LK L L  V+Y           GCPVL+ L+I+    
Sbjct: 119 TLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREER 178

Query: 182 DPN-LVCFYIPSPTLIRLMLNSRSYPLNEPDNTTTFRVRIDTPQLRYLQVHDSMSEVVSD 358
           D   +V    PS  ++R+   +  +          ++V +D P L YL + D +S+    
Sbjct: 179 DNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFV 238

Query: 359 GPLTSLIEA--DIVFDCDE----PVEGVVYYSRHSAI-EFVGRLCN 475
             L SL++A  D+  D +E    P  G + Y  H  I E +GR+ N
Sbjct: 239 KDLPSLVKAFIDVEQDSEEFEESPHNGGISY--HGPIYELLGRISN 282


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
 Frame = +2

Query: 2   TLVDLRLNCHARIPMSGVVYLSALKKLQLNFVDYXXXXXXXXXXYGCPVLQVLIIDIVSL 181
           TLV ++L+C   + +   V+L +LK L L  V+Y           GCPVL+ L+I+    
Sbjct: 142 TLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREER 201

Query: 182 DPN-LVCFYIPSPTLIRLMLNSRSYPLNEPDNTTTFRVRIDTPQLRYLQVHDSMSEVVSD 358
           D   +V    PS  ++R+   +  +          ++V +D P L YL + D +S+    
Sbjct: 202 DNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFV 261

Query: 359 GPLTSLIEA--DIVFDCDE----PVEGVVYYSRHSAI-EFVGRLCN 475
             L SL++A  D+  D +E    P  G + Y  H  I E +GR+ N
Sbjct: 262 KDLPSLVKAFIDVEQDSEEFEESPHNGGISY--HGPIYELLGRISN 305


Top