BLASTX nr result
ID: Rehmannia26_contig00030259
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00030259
(1070 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 78 5e-12
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 77 9e-12
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 76 3e-11
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 75 3e-11
gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus pe... 75 4e-11
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 75 6e-11
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 75 6e-11
ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303... 74 1e-10
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 74 1e-10
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 73 2e-10
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ... 73 2e-10
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A... 72 3e-10
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 71 6e-10
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ... 71 6e-10
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 71 6e-10
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 71 8e-10
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia... 70 1e-09
ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutr... 70 1e-09
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 70 1e-09
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo... 70 1e-09
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 78.2 bits (191), Expect = 5e-12
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Frame = +3
Query: 102 KIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCDRAKLVWKLAPL 281
KIK F+WK + + +L +GV ++ C C E ETL I F C A+ VW L P+
Sbjct: 783 KIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQVWALTPM 842
Query: 282 SWDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTYILWWLWKSRNLWVFRGVWKSEVE 461
F F N + + +S + +S +I+W LWK+RN +F G+ +
Sbjct: 843 QSPNHGFGDSIFTNVNHVIGNCHNTELSPHLRYVSPWIIWILWKNRNKRLFEGIGSVSLS 902
Query: 462 IVSGALE---EWQEMHD 503
IV ALE EW + H+
Sbjct: 903 IVGKALEDCKEWLKAHE 919
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 77.4 bits (189), Expect = 9e-12
Identities = 72/291 (24%), Positives = 115/291 (39%), Gaps = 5/291 (1%)
Frame = +3
Query: 60 AAMWKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFF 239
+++W +L + K+KHF+W+ +LP L +K V++ C C E++ I
Sbjct: 120 SSIWNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHILL 179
Query: 240 NCDRAKLVWKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTYILWWLWKSR 419
C A+ W + + + G + N W +A SL + QL+ I W LW++R
Sbjct: 180 QCPFARTCWMTSSIGFFG---DGSNLLLW----LEALFNRYSLEQTQLAVMICWSLWQNR 232
Query: 420 NLWVFRGVWKSEVEIVSGA---LEEWQEMHDCQHSFFSPGMDSAAAAGEYLFSDTAVEGL 590
N V+RG ++++ A L +WQ + Q F P A + + V G
Sbjct: 233 NDMVWRGKTSGVQQLLNSAGHFLFQWQLVRKQQFLFSQPSPIGHGA----ICWEPPVAGR 288
Query: 591 LSCAVSSTKIXXXXXXXXXXXXXXNLKILAWCSCRDFVG--SPMVATLLAVRHAMVKAVH 764
L C V + C G S A L VR A+
Sbjct: 289 LKCNVDVALFAFRGYIGFGNVIRDSNCAFMAARCCSIPGRFSARDAEALGVREALSWIKQ 348
Query: 765 LKWTKIKIQLDVKEIAHKLNKGLAFDCVSMTIAEDTFLLKNLFDFCSFSFV 917
L+ + + I++D + + L L+ I ED L N SFSFV
Sbjct: 349 LQLSNVTIEMDCLTVYNALVNNLSGPSSFSLIIEDCRALSNSIRDVSFSFV 399
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 75.9 bits (185), Expect = 3e-11
Identities = 44/159 (27%), Positives = 71/159 (44%)
Frame = +3
Query: 33 ESSGAKTDVAAMWKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEH 212
+ + K V +++ L KI+ F+WK H +P + +L +G+ D C C
Sbjct: 1030 QEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTE 1089
Query: 213 EETLEPIFFNCDRAKLVWKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTY 392
ET+ I F C A+ VW + LS G F + N + + + + +S +
Sbjct: 1090 NETINHILFECPLARQVWAITHLSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPW 1149
Query: 393 ILWWLWKSRNLWVFRGVWKSEVEIVSGALEEWQEMHDCQ 509
ILW+LWK+RN +F G +V A E + E Q
Sbjct: 1150 ILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQ 1188
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 75.5 bits (184), Expect = 3e-11
Identities = 77/300 (25%), Positives = 122/300 (40%), Gaps = 6/300 (2%)
Frame = +3
Query: 84 KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCDRAKLV 263
K+ K+KHF+WK LP L+R+ ++ + C CG+ E +L + C AK V
Sbjct: 976 KIHTSPKVKHFLWKAMKGALPVGEALSRRNIEAEVTCKRCGQTESSLH-LMLLCPYAKKV 1034
Query: 264 WKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*VS-----LNRIQLSTYILWWLWKSRNLW 428
W+LAP+ ++ + + K+ V+ L L ++LW LWK+RN
Sbjct: 1035 WELAPVLFNPSEATHSSVA----LLLVDAKRMVALPPTGLGSAPLYPWLLWHLWKARNRL 1090
Query: 429 VFRGVWKSEVEIVSGALEEWQEMHDCQHSFFSPGMDSAAAAGEYLFSDTAVEGLLSCAVS 608
+F SE +V A+ + + + Q P S S T + SC V
Sbjct: 1091 IFDNHSCSEEGLVLKAILDARAWMEAQLLIHHPSPISDYP------SPTPNLKVTSCFVD 1144
Query: 609 ST-KIXXXXXXXXXXXXXXNLKILAWCSCRDFVGSPMVATLLAVRHAMVKAVHLKWTKIK 785
+ +KI S FVGS ++A LAV A+V A+ ++
Sbjct: 1145 AAWTTSGYCGMGWFLQDPYKVKIKENQSSSSFVGSALMAETLAVHLALVDALSTGVRQLN 1204
Query: 786 IQLDVKEIAHKLNKGLAFDCVSMTIAEDTFLLKNLFDFCSFSFVCLLESQSSSKLVKFAI 965
+ D KE+ LN G + + D L F F F+ L + + L K A+
Sbjct: 1205 VFSDCKELISLLNSGKSI-VELRGLLHDIRELSVSFTHLCFFFIPRLSNVVADSLAKSAL 1263
>gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus persica]
Length = 378
Score = 75.1 bits (183), Expect = 4e-11
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 69 WKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCD 248
WK L + KI+ FIW+C+ +L + L R+ VD++ C CG + +T +FF C+
Sbjct: 209 WKHIWALQVPPKIQMFIWRCYRNVLAVRENLRRRRVDVEADCLLCGNNGKTEVHLFFRCE 268
Query: 249 RAKLVWKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*VSLNRI-QLSTYILWWLWKSRNL 425
A+L W +P D E +F + W + + + ++ I Q+ + LW +WK RN
Sbjct: 269 IARLFWFASPSHLDVHGVEGEDFLSCWECLLQKFAQVEKMDEILQIVAFGLWRIWKWRNA 328
Query: 426 WVF 434
VF
Sbjct: 329 VVF 331
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 74.7 bits (182), Expect = 6e-11
Identities = 50/152 (32%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +3
Query: 39 SGAKTDVAAMWKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEE 218
S T+ WK K+ + GK+KHFIW+ H IL +V L ++G+DLD +C C E
Sbjct: 274 SNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNE 333
Query: 219 TLEPIFFNCDRAKLVWKLAPLS-WDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTYI 395
+FF C + K VW+ L E+ EK + + V K I L++
Sbjct: 334 DAGHLFFKCKKVKKVWQENNLEILRQELAEKRSGREVMETVFNRPAK-----EILLASIT 388
Query: 396 LWWLWKSRNLWV--FRGVWKSEVEIVSGALEE 485
LW W RN RG SE+ + AL E
Sbjct: 389 LWQWWSERNRVQEGERGRSPSELGFIIAALAE 420
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 74.7 bits (182), Expect = 6e-11
Identities = 50/152 (32%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +3
Query: 39 SGAKTDVAAMWKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEE 218
S T+ WK K+ + GK+KHFIW+ H IL +V L ++G+DLD +C C E
Sbjct: 1167 SNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNE 1226
Query: 219 TLEPIFFNCDRAKLVWKLAPLS-WDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTYI 395
+FF C + K VW+ L E+ EK + + V K I L++
Sbjct: 1227 DAGHLFFKCKKVKKVWQENNLEILRQELAEKRSGREVMETVFNRPAK-----EILLASIT 1281
Query: 396 LWWLWKSRNLWV--FRGVWKSEVEIVSGALEE 485
LW W RN RG SE+ + AL E
Sbjct: 1282 LWQWWSERNRVQEGERGRSPSELGFIIAALAE 1313
>ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303799 [Fragaria vesca
subsp. vesca]
Length = 351
Score = 73.6 bits (179), Expect = 1e-10
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Frame = +3
Query: 3 RKRTLLEDVVESSGAKTDVAAMWKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDL 182
RK +E + SS ++ +WK K+++ K++ W+ ++LP K L +KGVDL
Sbjct: 71 RKVEHMETIASSSSSQGGWGFIWKKVWKVNVPPKVRMHAWRILKEVLPTKWVLKKKGVDL 130
Query: 183 DCKCGFCGEHEETLEPIFFNCDRAKLVWKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*V 362
+C FCG +E IF NC +WK + L+ + W + + +
Sbjct: 131 GVECPFCGGDKEDGLHIFKNCGVVNQLWKCSSLTSTPSTHPAMEIKAWLCDMVEL----M 186
Query: 363 SLNRIQLSTYILWWLWKSRNLWVFRGVWKSEVEI---VSGALEEWQEMH---DC 506
+ ++++ Y LW +W +N V+RG V + V+ ++E+ + H DC
Sbjct: 187 HVKKLEVFLYTLWAIWVEQNNIVWRGGCFVPVNVAGWVNNQVDEYIKYHCRTDC 240
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 73.6 bits (179), Expect = 1e-10
Identities = 38/144 (26%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Frame = +3
Query: 57 VAAMWKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIF 236
V+A+ K+ K KHF W+C L +L + + + C CG EE++ +
Sbjct: 919 VSALQAQVWKIKTTRKFKHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLL 978
Query: 237 FNCDRAKLVWKLAPLSWDGEMFEKCN-FQNWWYFVCKAGKK*VSLNRIQLSTYILWWLWK 413
F C ++ +W L+P+ +F + + F N+ + + + + ++ + +++ +ILW++WK
Sbjct: 979 FLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWK 1038
Query: 414 SRNLWVFRGVWKSEVEIVSGALEE 485
SRN ++F V +S I+ A++E
Sbjct: 1039 SRNRFIFENVIESPQVILDFAIQE 1062
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 73.2 bits (178), Expect = 2e-10
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Frame = +3
Query: 66 MWKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNC 245
+W+ K I K+K F WK H L + ++G+++D C CGE EET E + + C
Sbjct: 1050 LWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGC 1109
Query: 246 DRAKLVWKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTYILWWLWKSRNL 425
D + W ++PL E +F+ W + K L I W +W RN
Sbjct: 1110 DESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHK---DTEWWALFWMICWNIWLGRNK 1166
Query: 426 WVFRGVWKSEVEIVSGALEEWQEM-HDCQHS 515
WVF + E+V A+ E +C H+
Sbjct: 1167 WVFEKKKLAFQEVVERAVRGVMEFEEECAHT 1197
>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|3184275|gb|AAC18922.1| putative reverse transcriptase
[Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
H domain-containing protein [Arabidopsis thaliana]
Length = 365
Score = 72.8 bits (177), Expect = 2e-10
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Frame = +3
Query: 15 LLEDVVESSGAKTDVA-AMWKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCK 191
L E+ ++ T+V A+WK L + KIKHF+W+C L +L + +D D
Sbjct: 19 LEEEAIQPPPGSTEVKQAIWK----LHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPI 74
Query: 192 CGFCGEHEETLEPIFFNCDRAKLVWKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*V--S 365
C C EET+ I FNC + VW+ A + + +F++ + + K S
Sbjct: 75 CQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNS 134
Query: 366 LNRIQLSTYILWWLWKSRNLWVFR 437
L+R L +I+W LWKSRN+++F+
Sbjct: 135 LDRF-LPFWIMWRLWKSRNVFLFQ 157
>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 968
Score = 72.4 bits (176), Expect = 3e-10
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Frame = +3
Query: 66 MWKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNC 245
+W L + K+K F+W+ H LPC +L ++ + CG CGE EET+ C
Sbjct: 640 IWSLIWDLLVPNKVKLFLWRACHAFLPCVERLFKRNICSHSGCGRCGEGEETVVHSLCWC 699
Query: 246 DRAKLVWKLAPLSWDG--EMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTYILWWLWKSR 419
AK VWK W G + ++ +F + + V G ++ +L I WWLWK R
Sbjct: 700 RVAKKVWKCT--YWRGVYKSWQISSFADLFGLVAMEG----NIKNTELFALICWWLWKDR 753
Query: 420 NLWVFRGVWKSEVEIVSGALEEWQ 491
N VF G E + EWQ
Sbjct: 754 N-EVFHGKKGLEPRQIVEKCLEWQ 776
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 71.2 bits (173), Expect = 6e-10
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Frame = +3
Query: 69 WKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCD 248
WK KL + GKIKHF+W+ H L + L+ +G+D+D +C CG + E +FF C
Sbjct: 1302 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 1361
Query: 249 RAKLVWKLAPLSWDGEMFE-KCNFQNWWYFV-CKAGKK*VSLNRIQLSTYILWWLWKSRN 422
K VW+ L M E + + +N + C+ + S + LW WK RN
Sbjct: 1362 PVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPENERTS------AIVCLWQWWKERN 1415
Query: 423 LWVFRGVWKSEVEI 464
G+ +S E+
Sbjct: 1416 EVREGGIPRSPAEL 1429
>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1555
Score = 71.2 bits (173), Expect = 6e-10
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 1/279 (0%)
Frame = +3
Query: 84 KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCDRAKLV 263
KL K+K F+WK +P +L + +D+D +C CG + E++ + F+C A+ V
Sbjct: 1253 KLDCAPKVKLFVWKVLKGAVPVGERLLERHIDIDPRCKRCGSN-ESITHLLFHCQFAQRV 1311
Query: 264 WKLAPLSWDGEMFEKCNFQNWWYFVCK-AGKK*VSLNRIQLSTYILWWLWKSRNLWVFRG 440
W LAPL+ + + W + + L +I W +WK+RN +VF G
Sbjct: 1312 WHLAPLATAPDFRGMIDLMADWPALSNLKALPPTGIASGNLVPWIFWNIWKARNRFVFEG 1371
Query: 441 VWKSEVEIVSGALEEWQEMHDCQHSFFSPGMDSAAAAGEYLFSDTAVEGLLSCAVSSTKI 620
V S + +S A+ +E + G L T ++ + S+ KI
Sbjct: 1372 VSASPEDTLSSAIRLAREWSISGKPEKTEGKKHRLIEVPVLSGTTRIQ-TDAAWCSARKI 1430
Query: 621 XXXXXXXXXXXXXXNLKILAWCSCRDFVGSPMVATLLAVRHAMVKAVHLKWTKIKIQLDV 800
+++ +F+ SP++A LA+R M++ L+ ++ + D
Sbjct: 1431 AGIGGIIHLPPRNREIQLK-----MEFIASPLMAEGLALREVMLRCQDLELHNLRFESDS 1485
Query: 801 KEIAHKLNKGLAFDCVSMTIAEDTFLLKNLFDFCSFSFV 917
+ + LN+ ++ + +A+ L + F S +FV
Sbjct: 1486 SLLVNCLNQVVSIAEMHSVVADIIELSRR---FASVAFV 1521
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 71.2 bits (173), Expect = 6e-10
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = +3
Query: 84 KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCDRAKLV 263
+L I KIKHFIW+C L QL + + D C C +ET+ I F C A++V
Sbjct: 1390 RLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVV 1449
Query: 264 WKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQ--LSTYILWWLWKSRNLWVFR 437
W+ A S + N + + + GKK +L + + +I+W LWKSRN ++F+
Sbjct: 1450 WRSANFSGSNRLCFTDNLEENIRLILQ-GKKNQNLPILNGLMPFWIMWRLWKSRNEYLFQ 1508
Query: 438 GVWKSEVEIVSGALEEWQE 494
+ + ++ A +E E
Sbjct: 1509 QLDRFPWKVAQKAEQEATE 1527
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 1333
Score = 70.9 bits (172), Expect = 8e-10
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = +3
Query: 102 KIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCDRAKLVWKLAPL 281
KIK F+W+ LP Q+ R+G+ +D +C CGE E++ + F C A+ VW L+ +
Sbjct: 1056 KIKLFLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGV 1115
Query: 282 SWDGEMFEKCN-FQNWWYFVCKAGKK*VSLNRIQLSTYILWWLWKSRNLWVFRGVWKSEV 458
F+ + F N Y + GK + + ++LW LWK+R+ F G S +
Sbjct: 1116 PTSQFGFQNSSIFANIQYLLELKGKGLIPEQIKKSWPWVLWRLWKNRDKLFFEGTIFSPL 1175
Query: 459 EIVSGALEEWQEMHDCQHSFFSPGMDSAAAAGEYLFS 569
+ + ++ QE F + + ++ AGE + S
Sbjct: 1176 KSIEKIRDDVQEW------FLAQALVASVDAGETVCS 1206
>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
thaliana] gi|7269807|emb|CAB79667.1| putative protein
[Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
putative reverse transcriptase/RNA-dependent DNA
polymerase [Arabidopsis thaliana]
gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 575
Score = 70.5 bits (171), Expect = 1e-09
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Frame = +3
Query: 102 KIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCDRAKLVWKLA-- 275
KI+HF+WKC LP L + + + C C +ET+ + F C A+L W ++
Sbjct: 265 KIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSI 324
Query: 276 PLSWDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTYILWWLWKSRNLWVFRGVWKSE 455
P+ GE + +W F G QL ++LW LWK+RN VFRG +
Sbjct: 325 PIPLGGEWADSIYVNLYWVFNLGNGNPQWE-KASQLVPWLLWRLWKNRNELVFRGREFNA 383
Query: 456 VEIVSGA---LEEWQ 491
E++ A LEEW+
Sbjct: 384 QEVLRRAEDDLEEWR 398
>ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutrema salsugineum]
gi|557106756|gb|ESQ47071.1| hypothetical protein
EUTSA_v10028075mg [Eutrema salsugineum]
Length = 343
Score = 70.1 bits (170), Expect = 1e-09
Identities = 40/148 (27%), Positives = 67/148 (45%)
Frame = +3
Query: 84 KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCDRAKLV 263
KL K+K F+W+ + P V+L R+G+ +D C CG + ET+ + +C A+ V
Sbjct: 66 KLQTVPKVKQFLWRAVVEAFPVGVELVRRGIQVDFACKICG-NPETITHVLRDCQLARKV 124
Query: 264 WKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTYILWWLWKSRNLWVFRGV 443
W LAPL + + + + ++ L +I W LW RN +F
Sbjct: 125 WNLAPLRTQSHLNTVLCLDFLAHILSMVSLPPIEVSTTSLPAWICWNLWTPRNHRIFSDT 184
Query: 444 WKSEVEIVSGALEEWQEMHDCQHSFFSP 527
S EI++ A+ + + + Q S P
Sbjct: 185 TYSAYEIITKAICDARAWQEAQSSLRKP 212
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 70.1 bits (170), Expect = 1e-09
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +3
Query: 69 WKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCD 248
WK KL + GKIKHF+W+ H L + L+ +G+D+D +C CG + E +FF C
Sbjct: 1247 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 1306
Query: 249 RAKLVWKLAPLSWDGEMFE-KCNFQNWWYFV-CKAGKK*VSLNRIQLSTYILWWLWKSRN 422
K VW+ L M E + + +N + C+ + S + LW WK RN
Sbjct: 1307 PVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPENERTS------AIVCLWQWWKERN 1360
>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
Length = 639
Score = 70.1 bits (170), Expect = 1e-09
Identities = 42/132 (31%), Positives = 61/132 (46%)
Frame = +3
Query: 69 WKFT*KLSIKGKIKHFIWKCWHQILPCKVQLNRKGVDLDCKCGFCGEHEETLEPIFFNCD 248
WK KL + GKIKHF+W+ H L + L +G+D+D +C CG + E +FF C
Sbjct: 242 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKCK 301
Query: 249 RAKLVWKLAPLSWDGEMFEKCNFQNWWYFVCKAGKK*VSLNRIQLSTYILWWLWKSRNLW 428
K VW+ L M E+ Q V ++ + R + LW WK RN
Sbjct: 302 PVKKVWQALNLEELRSMLEQ---QTSGKNVLQSIYCRPEIERTS-AIVCLWQWWKERNEV 357
Query: 429 VFRGVWKSEVEI 464
G+ +S E+
Sbjct: 358 REGGIPRSPAEL 369