BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00030203
         (650 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617...   179   5e-43
ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625...   174   2e-41
ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616...   159   5e-37
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616...   158   1e-36
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   144   2e-32
ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A...   135   1e-29
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   131   2e-28
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   128   2e-27
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...   124   2e-26
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...   119   6e-25
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   116   5e-24
gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao]   116   7e-24
ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312...   115   1e-23
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...   114   3e-23
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...   114   3e-23
ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein A...   113   6e-23
ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303...   112   9e-23
ref|XP_003621136.1| Pentatricopeptide repeat-containing protein ...   112   9e-23
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...   111   2e-22
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...   109   6e-22

>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
          Length = 440

 Score =  179 bits (455), Expect = 5e-43
 Identities = 83/207 (40%), Positives = 123/207 (59%)
 Frame = +2

Query: 2   WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSIN 181
           WD D++ DIF  RD  LI +IPLS  + +DSW W  + KG YTV+S Y++L   L    +
Sbjct: 61  WDSDILNDIFNERDKNLIWQIPLSNRSNADSWYWMHEAKGVYTVRSSYKMLAPCLDIPSS 120

Query: 182 NFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHI 361
           +    W   W L+VP K K+ +WRA  + LPT  NLL + ++V  +C  C+ S ES  HI
Sbjct: 121 SI---WNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHI 177

Query: 362 FFICPFARLCWSLASVNILVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNACI 541
              CPFAR CW  +S+    DG +N++  L++ ++R+SLE   + VM+ W++W NRN  +
Sbjct: 178 LLQCPFARTCWMTSSIGFFGDG-SNLLLWLEALFNRYSLEQTQLAVMICWSLWQNRNDMV 236

Query: 542 WNGSNKSATMVINSASFFLIQWETAQQ 622
           W G       ++NSA  FL QW+  ++
Sbjct: 237 WRGKTSGVQQLLNSAGHFLFQWQLVRK 263


>ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]
          Length = 412

 Score =  174 bits (441), Expect = 2e-41
 Identities = 86/214 (40%), Positives = 124/214 (57%), Gaps = 2/214 (0%)
 Frame = +2

Query: 2   WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSIN 181
           WD +++ DIF  RD +LILKIPLS+    D W W  D +GCY+V+S Y++L      S+ 
Sbjct: 108 WDYNVVSDIFNSRDKELILKIPLSSRREDDVWYWMADSRGCYSVRSCYKVLNPITPGSLA 167

Query: 182 NFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHI 361
           +    W+  W  KVP K KN +WRA  N LPT  NL+ +R+DV   C +CN   E+ +H 
Sbjct: 168 DV---WRKLWNSKVPNKVKNFIWRAAHNVLPTALNLISKRVDVPAMCSVCNAYEETVLHS 224

Query: 362 FFICPFARLCWSLASVNILVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNACI 541
              C FA+ CW+ +SV   V   +N +  L   ++R S ++ N  +M+ W IW NRN  +
Sbjct: 225 LVACSFAKSCWTSSSVG-FVGYCSNFLDWLAHVFTRCSKDECNTAMMICWRIWVNRNNKV 283

Query: 542 WNGSNKSATMVINSASFFLIQWETAQQ--LDIGD 637
           WN +  S   ++NSA  FL QW+ A+Q   D+ D
Sbjct: 284 WNNTTSSVCQILNSAGQFLYQWQAAKQQVFDVND 317


>ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]
          Length = 977

 Score =  159 bits (403), Expect = 5e-37
 Identities = 81/208 (38%), Positives = 119/208 (57%), Gaps = 1/208 (0%)
 Frame = +2

Query: 2    WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSIN 181
            WD DL+ D+F  RD +LIL+IPLS+    D W W  D  GCY+V+S Y+ L      +  
Sbjct: 737  WDYDLVSDLFNARDKELILQIPLSSCRNDDVWYWLVDSCGCYSVRSCYKYLHS---LTPG 793

Query: 182  NFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHI 361
             F   W+  W L V  K KN VWRA  N LPT  NL+ +R+++  +C +C  S E+A+H 
Sbjct: 794  PFIGVWRKLWNLNVAHKVKNFVWRAATNVLPTAVNLISKRVNIPPTCAVCLASDETALHS 853

Query: 362  FFICPFARLCWSLASVNILVDGHT-NVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNAC 538
               C  A+ CW  +SV  +  GH  + ++ LD  ++R S E+ ++ +M+ W +W NRN  
Sbjct: 854  LVECNVAKACWISSSVGFV--GHCYSFLEWLDHIFTRCSKEECHVAMMICWRVWINRNDK 911

Query: 539  IWNGSNKSATMVINSASFFLIQWETAQQ 622
            +WN    S   V+NSA   L QW+ A++
Sbjct: 912  VWNNKTGSVNQVLNSAGQLLYQWQVAKK 939


>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
          Length = 510

 Score =  158 bits (399), Expect = 1e-36
 Identities = 77/212 (36%), Positives = 118/212 (55%)
 Frame = +2

Query: 2   WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSIN 181
           WD D++ DIF  RD  LI +IPLS+    D+W WS + +G +TV+S Y++L        +
Sbjct: 134 WDLDMLVDIFNDRDQALITQIPLSSRRDDDAWYWSANSRGLFTVRSCYKILAYLSEPPSS 193

Query: 182 NFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHI 361
           N    W+  W LKVP K K+ +W A +N LPT  NL   +++V   CP+CN   E   H 
Sbjct: 194 NV---WQKVWKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVAHC 250

Query: 362 FFICPFARLCWSLASVNILVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNACI 541
              C FA+ CW L+ +   V G  N +  L+  +SR+S +D ++  M  W++W N+NA +
Sbjct: 251 LVNCSFAKSCWLLSPIG-YVGGCENFMDWLEGIFSRYSSDDCDLAAMTCWSLWENKNAKV 309

Query: 542 WNGSNKSATMVINSASFFLIQWETAQQLDIGD 637
           W       + V+N A   L QW++ ++L + D
Sbjct: 310 WKNRKGRLSSVLNLAGQVLFQWKSVRKLQVFD 341


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score =  144 bits (364), Expect = 2e-32
 Identities = 75/209 (35%), Positives = 106/209 (50%)
 Frame = +2

Query: 2   WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSIN 181
           WD D++ D+F  RD +LI  IPL+  N  DSW W  D KG Y VK+ YRLL   LG    
Sbjct: 366 WDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLVKNCYRLLQGDLGRPET 425

Query: 182 NFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHI 361
           +F   W  FW LK+P K +N +W+ C NC+ T  NL  R +D+   C  CN  PE+  H+
Sbjct: 426 SF---WNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHV 482

Query: 362 FFICPFARLCWSLASVNILVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNACI 541
            F C  AR CW L          + +   + + +     +    + +V  ++WN RN  +
Sbjct: 483 LFGCSMARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWV 542

Query: 542 WNGSNKSATMVINSASFFLIQWETAQQLD 628
           WN  + +   VI+ A+  L Q   AQ  D
Sbjct: 543 WNKQSNTTYGVISPANQLLEQRTRAQSAD 571


>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 459

 Score =  135 bits (339), Expect = 1e-29
 Identities = 73/204 (35%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
 Frame = +2

Query: 2   WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSIN 181
           WD DLI   F+ RD  LIL IP S  N  D W W  +  G Y+VKS YRLL   +     
Sbjct: 108 WDVDLISSKFDERDRNLILNIPPSKRNEEDVWYWLANTSGVYSVKSTYRLLLGEVSDVAG 167

Query: 182 NFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHI 361
           +    W+  W L+VP K +N VWRA  N LPT  NL  + + +   C + N   E+ +H+
Sbjct: 168 DM---WRKIWKLEVPAKVRNFVWRAASNVLPTAVNLRSKHVSLNDLCLVGNFDKETVLHL 224

Query: 362 FFICPFARLCWSLASVNI--LVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNA 535
              CPFAR CW  + V    +     + +Q L  N +    E   + VMV W +W NRN 
Sbjct: 225 LVDCPFARSCWIKSKVGFFGIYSSFKDWLQALFRNCTN---EQCWIAVMVCWKLWCNRNN 281

Query: 536 CIWNGSNKSATMVINSASFFLIQW 607
            +W G   +   ++N+A    + W
Sbjct: 282 LVWQGKCDTTKQIVNAAGVGAVAW 305


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  131 bits (329), Expect = 2e-28
 Identities = 69/214 (32%), Positives = 107/214 (50%)
 Frame = +2

Query: 2   WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSIN 181
           WD++++ D+F  RD  LI  I LS +  +D   W  D KG ++VK  YR+          
Sbjct: 119 WDQEILNDLFSERDKNLINSIVLSPTVGTDQLFWFKDPKGKFSVKDVYRVQQPDFSVLYP 178

Query: 182 NFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHI 361
           +    W+  W L +  K K  +WRA  N LP R+NL+ R++    SCP C + PE+ MHI
Sbjct: 179 SNVVVWRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHI 238

Query: 362 FFICPFARLCWSLASVNILVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNACI 541
             +C      W   ++   +   +N+++   S +  F        V++ W++W N N  +
Sbjct: 239 LVLCDVTTQSWKYVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFVVLWWSLWTNMNDVV 298

Query: 542 WNGSNKSATMVINSASFFLIQWETAQQLDIGDWH 643
           WNG   S   V + AS FL QW  A++L   D+H
Sbjct: 299 WNGKKLSWRAVASRASSFLFQWGKARKLT--DYH 330


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  128 bits (321), Expect = 2e-27
 Identities = 73/212 (34%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
 Frame = +2

Query: 2    WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLL-----CEGL 166
            W ED IRD F  RD  LIL IPL  S+  D   WS D +G YT +SGY  L        L
Sbjct: 438  WREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTAL 497

Query: 167  GSSINNFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPE 346
             +S  +  F W   W +  PPK  N  WRA  NCLPTR  L  R +D  + CP+C +  E
Sbjct: 498  VASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELE 557

Query: 347  SAMHIFFICPFARLCWSLASVNILVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNN 526
            + +H    C  AR  W  + + +L     + V  L + ++          + V W +W  
Sbjct: 558  TTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWR 617

Query: 527  RNACIWNGSNKSATMVINSASFFLIQWETAQQ 622
            RN  +WNG    +  V+N     L  W  A +
Sbjct: 618  RNDVVWNGRIWHSQQVVNGCFTMLESWFHANE 649


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score =  124 bits (311), Expect = 2e-26
 Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
 Frame = +2

Query: 53  ILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSINNFTFD----WKGFWALK 220
           IL  PL +   +DS +W  +K GCY+VKS YR+  E +   +NN        W G W LK
Sbjct: 7   ILNTPLYSQVQTDSLLWKVEKNGCYSVKSAYRVCVEDV---VNNAHLRKPGYWSGIWRLK 63

Query: 221 VPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHIFFICPFARLCWSL 400
           VPP+ K  VWR C  C PTR  L+ R ++   +C  C +  E   HIFF C  A   W+ 
Sbjct: 64  VPPRVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNT 123

Query: 401 ASVNILV----DGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNACIWNGSNKSAT 568
           A+V  L+        N    + +   + S      +V +MW+IW +RN  +W   ++S+ 
Sbjct: 124 ANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLWQQVSESSV 183

Query: 569 MVINSASFFLIQWETA 616
            ++  A   L  W  A
Sbjct: 184 TILERAKHLLEGWRKA 199


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score =  119 bits (299), Expect = 6e-25
 Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 7/213 (3%)
 Frame = +2

Query: 2   WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGL---GS 172
           W++ ++  IF  +D   IL IPL     SD+ IW     G YTVKS YR+  + L    S
Sbjct: 49  WNQQIVTSIFNPQDAAAILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRICSDLLHPHDS 108

Query: 173 SINNFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESA 352
           + NN +  W   W L +P + +  +WR   NCLPTR NL  R I    SC +  N  E  
Sbjct: 109 AHNNSS--WMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFENFAECH 166

Query: 353 MHIFFICPFARLCWSLASVNI----LVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIW 520
            H+FF+C  A  CW    +++    L+    N    L     R   + +    M++W++W
Sbjct: 167 THLFFVCAKAMDCWKNIGLHVVLSELLPLANNFTTLLFDFMHRLCSQQQQAAGMLLWSLW 226

Query: 521 NNRNACIWNGSNKSATMVINSASFFLIQWETAQ 619
            +RN  +W+ ++ +  + I+ A   L +W   Q
Sbjct: 227 KSRNIKLWDSTDTTTAITISRAKDTLHEWSCMQ 259


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  116 bits (291), Expect = 5e-24
 Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 2/193 (1%)
 Frame = +2

Query: 2    WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSIN 181
            W+ +LI   F  RD Q IL IPLS     D   W+  K G Y+VK+ Y L   G G +++
Sbjct: 977  WNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAYML---GKGGNLD 1033

Query: 182  NFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHI 361
            +F   W   W+L V PK ++ +WRAC + LP R  L  R +     CP C    E+  H+
Sbjct: 1034 DFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHL 1093

Query: 362  FFICPFARLCWSLASVNILVDGHTNVVQCLDS--NWSRFSLEDKNMVVMVMWAIWNNRNA 535
            F+ CP +   W      IL+ G  +   C D+   WS+   +       ++W +W  RN 
Sbjct: 1094 FYRCPMSLKLWEELGSYILLPGIEDEAMC-DTLVRWSQMDAKVVQKGCYILWNVWVERNR 1152

Query: 536  CIWNGSNKSATMV 574
             ++  +++ AT+V
Sbjct: 1153 RVFEHTSQPATVV 1165


>gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao]
          Length = 290

 Score =  116 bits (290), Expect = 7e-24
 Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
 Frame = +2

Query: 32  EFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGLGSSINNFT------- 190
           E  + Q IL IPLS     D  +W   K G YTVKSGY+ L    GS+++N T       
Sbjct: 2   ELLNTQQILSIPLSIRQIPDCQVWFDTKNGSYTVKSGYKFL----GSTLDNVTNTSSSVQ 57

Query: 191 --FDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHIF 364
             + WK  W   VP K    +W+   + LPTRS L+ R +++ L CPLC    E+A H  
Sbjct: 58  GNWLWKKLWHCAVPRKTMLFMWKVIHDILPTRSELIKRGVNIELMCPLCEIEVETAFHCL 117

Query: 365 FICPFARLCWSLASVNI--LVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNAC 538
             C F+RL W         + + H +++  L   +   + ++    + ++WAIW  RN  
Sbjct: 118 CNCQFSRLVWLTTKCGFRDISNFHDSIIDWLQGVFEVLNKDETEEFICLLWAIWKTRNVV 177

Query: 539 IWNGSNKSATMVINSASFFLIQWETAQQ 622
           ++N S  +  +V+      + Q+  A +
Sbjct: 178 VFNQSRSTPMVVVEIGLDLIHQFRRASR 205


>ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312896 [Fragaria vesca
            subsp. vesca]
          Length = 2277

 Score =  115 bits (288), Expect = 1e-23
 Identities = 67/199 (33%), Positives = 99/199 (49%), Gaps = 8/199 (4%)
 Frame = +2

Query: 5    DEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRL----LCEGLGS 172
            D  L+  +F    V  I  +P+S+ + SD WIW+ D+KG + VKS Y +    + E    
Sbjct: 1046 DVVLLSHLFPAHIVHKIQALPISSRSNSDKWIWAPDRKGLFMVKSAYHIARTRVLEDHVM 1105

Query: 173  SINNFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESA 352
            ++N     W   W   VP K K  VW+   N LP+RS L  R ID+   CP C+   ES 
Sbjct: 1106 ALNPSAQLWNKIWNAPVPGKVKICVWKVASNILPSRSRLSQRGIDIDTQCPFCDEEVESP 1165

Query: 353  MHIFFICPFARLCWSLASVNILVDGHTNVVQCLDSNWSRFSLEDK----NMVVMVMWAIW 520
            +H    CP A     L  V I +   TN +     +W   SLE+       ++M++W++W
Sbjct: 1166 IHALRDCPHAAAFIQLVDVPIQL-ADTNAL-----DWLVSSLENSPSTFATLMMIIWSVW 1219

Query: 521  NNRNACIWNGSNKSATMVI 577
             N+N  +WN + K AT V+
Sbjct: 1220 RNQNDHVWNNNAKQATEVV 1238


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score =  114 bits (284), Expect = 3e-23
 Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 5/205 (2%)
 Frame = +2

Query: 17  IRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGL-GSSINNFTF 193
           I  +F       I+  PL +    D  IW  +  G Y+V+S Y L  E L  +S      
Sbjct: 107 IGTVFSHDIASAIINTPLFSKVQHDRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPG 166

Query: 194 DWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHIFFIC 373
            W   W LKVPPK KN +WR C   LPTR+ L D+ +    +C  C+ + E   H+F +C
Sbjct: 167 YWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVC 226

Query: 374 PFARLCWSL----ASVNILVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNACI 541
            F    W L    + +   V         +     RF+LE ++ + + MW++W  RN  +
Sbjct: 227 TFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLE-QSQIFVTMWSLWKRRNLKV 285

Query: 542 WNGSNKSATMVINSASFFLIQWETA 616
           W   N+S  M ++ A   + +W+ A
Sbjct: 286 WENKNESCAMTVDRARVMMEEWQLA 310


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score =  114 bits (284), Expect = 3e-23
 Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 5/205 (2%)
 Frame = +2

Query: 17  IRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCEGL-GSSINNFTF 193
           I  +F       I+  PL +    D  IW  +  G Y+V+S Y L  E L  +S      
Sbjct: 200 IGTVFSHDIASAIINTPLFSKVQHDRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPG 259

Query: 194 DWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPESAMHIFFIC 373
            W   W LKVPPK KN +WR C   LPTR+ L D+ +    +C  C+ + E   H+F +C
Sbjct: 260 YWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVC 319

Query: 374 PFARLCWSL----ASVNILVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWNNRNACI 541
            F    W L    + +   V         +     RF+LE ++ + + MW++W  RN  +
Sbjct: 320 TFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLE-QSQIFVTMWSLWKRRNLKV 378

Query: 542 WNGSNKSATMVINSASFFLIQWETA 616
           W   N+S  M ++ A   + +W+ A
Sbjct: 379 WENKNESCAMTVDRARVMMEEWQLA 403


>ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 735

 Score =  113 bits (282), Expect = 6e-23
 Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
 Frame = +2

Query: 2   WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRL--LCEGLGSS 175
           W+ ++I D+F   ++ LILKIPLS     D  +W  DKKGCYTVKSGY +  L EGL   
Sbjct: 193 WNVEVIEDLFNPMEIDLILKIPLSLYGGEDRLVWHFDKKGCYTVKSGYYVGRLVEGLEKQ 252

Query: 176 INNFTFD------WKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDV-YLSCPLCN 334
            +           W   W+ +VPPK     WR     LPTR+ L+ ++  +  +SC  C 
Sbjct: 253 ASGSDSRVKRGRLWCKLWSAQVPPKVHMHGWRLAQGTLPTRAALIKKKAQLPDVSCVFCL 312

Query: 335 NSPESAMHIFFICPFARLCWSLASVNILVDGHTNV---VQCLDSNWSRFSLEDKNMVVMV 505
           NS E ++H+F  C   R  W    + I    H +V   V   D      S E     +M 
Sbjct: 313 NSVEDSLHLFKNCNALRAFWKQYMLQIQPYTHPSVSIEVWFWDM-IDMLSGETLGAFLMA 371

Query: 506 MWAIWNNRNACIWNGSNKSATMVINSASFFLIQWETAQQ 622
           +W IW  RN  +W G   +A  +   ++  L +++   Q
Sbjct: 372 LWVIWVERNNMVWRGKYYNAANMFEWSTTLLREYKECHQ 410


>ref|XP_004298091.1| PREDICTED: uncharacterized protein LOC101303799 [Fragaria vesca
           subsp. vesca]
          Length = 351

 Score =  112 bits (280), Expect = 9e-23
 Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
 Frame = +2

Query: 2   WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCE------- 160
           W++ L++D+F   + Q+I KIPLS     D W+W  D+KG Y+V+SGY +  +       
Sbjct: 20  WEQWLLKDLFTDAEAQVIGKIPLSLRGGEDRWMWHFDRKGLYSVRSGYHVARKVEHMETI 79

Query: 161 -GLGSSINNFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNN 337
               SS   + F WK  W + VPPK +   WR     LPT+  L  + +D+ + CP C  
Sbjct: 80  ASSSSSQGGWGFIWKKVWKVNVPPKVRMHAWRILKEVLPTKWVLKKKGVDLGVECPFCGG 139

Query: 338 SPESAMHIFFICPFARLCWSLASVNILVDGH--TNVVQCLDSNWSRFSLEDKNMVVMVMW 511
             E  +HIF  C      W  +S+      H    +   L        ++   + +  +W
Sbjct: 140 DKEDGLHIFKNCGVVNQLWKCSSLTSTPSTHPAMEIKAWLCDMVELMHVKKLEVFLYTLW 199

Query: 512 AIWNNRNACIWNG 550
           AIW  +N  +W G
Sbjct: 200 AIWVEQNNIVWRG 212


>ref|XP_003621136.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355496151|gb|AES77354.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 821

 Score =  112 bits (280), Expect = 9e-23
 Identities = 68/207 (32%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
 Frame = +2

Query: 20   RDIFEFRDVQLILK-----IPLS---ASNCSDS-----WIWSGDKKGCYTVKSGYRLLCE 160
            RD+ + +++  ++K     +P S   A+  SDS     +IW  +K G Y+V+S YRL  E
Sbjct: 475  RDVDKLKELDQMIKKLRSVLPPSRGHATGISDSKVIINFIWKAEKNGKYSVRSVYRLCVE 534

Query: 161  GL-GSSINNFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNN 337
             +  +S      +W   W LKVPPK KN VWR C  CLPTR  L D+ ++   +C  C++
Sbjct: 535  EIIDTSYLRRPGEWSAIWKLKVPPKVKNLVWRMCRGCLPTRIRLQDKGVNCPTNCESCDS 594

Query: 338  SPESAMHIFFICPFARLCWSLASVNILVDGHTNVVQCLDSNWSRFSLEDKNMVVMVMWAI 517
            + E    + F+CPFA                   VQ L        +E K  +  V W++
Sbjct: 595  ANEDMADVMFVCPFA-------------------VQLL----RMLLVELKQQLATVFWSL 631

Query: 518  WNNRNACIWNGSNKSATMVINSASFFL 598
            W  RN  IW   N+S  MV++ A   L
Sbjct: 632  WKRRNLLIWENKNESCAMVVDRARVLL 658


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 1152

 Score =  111 bits (277), Expect = 2e-22
 Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 12/223 (5%)
 Frame = +2

Query: 2    WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRL--LCEGLGSS 175
            W+E L+ ++F   + ++ILKIPLS +   D  +W  D KGCY VKSGY +  L +GL   
Sbjct: 730  WNEWLLEELFTPMESEIILKIPLSLNGGEDRLVWHFDNKGCYNVKSGYFVGRLLDGLNRK 789

Query: 176  INNFTFD------WKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDV-YLSCPLCN 334
             +    D      W   W  +VPPK +   WR     LP+R+ L+ +++ +  ++C  C+
Sbjct: 790  ASGSDSDVQWSRLWCKLWRTQVPPKVRMHAWRLVKGTLPSRAALVKKQVQLPDVNCVFCS 849

Query: 335  NSPESAMHIFFICPFARLCWSLASVNILVDGHTNV---VQCLDSNWSRFSLEDKNMVVMV 505
             + E ++H+F  C   +  W    V I    H ++   V   D      S E     +M 
Sbjct: 850  TNVEDSLHLFKNCEALQPFWQQGMVQIHPRTHPSISVEVWFWDM-VEMLSGEKLEGFLMA 908

Query: 506  MWAIWNNRNACIWNGSNKSATMVINSASFFLIQWETAQQLDIG 634
            +W IW  RN  +W G   + T +++ +S  L++++   Q  +G
Sbjct: 909  LWVIWVERNNMVWRGQFYNITNMMDWSSSLLLEYKHCHQRSVG 951


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score =  109 bits (273), Expect = 6e-22
 Identities = 68/212 (32%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
 Frame = +2

Query: 2    WDEDLIRDIFEFRDVQLILKIPLSASNCSDSWIWSGDKKGCYTVKSGYRLLCE----GLG 169
            W +D+IR  F   D   ILKIPL      D  +W  DKKG Y+VKSGY+L  +       
Sbjct: 381  WRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPNRP 440

Query: 170  SSINNFTFDWKGFWALKVPPKAKNTVWRACINCLPTRSNLLDRRIDVYLSCPLCNNSPES 349
            SS       W   W L++P K K  +WRA  + LPT  NL  RRI     C  C +  E+
Sbjct: 441  SSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRET 500

Query: 350  AMHIFFICPFARLCWSLASVNILVDG--HTNVVQCLDSNWSRFSLEDKNMVVMVMWAIWN 523
              H  F C  +R  W L +    V      +V+  L +   R S  +  ++V V W+IW+
Sbjct: 501  IFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWH 560

Query: 524  NRNACIWNGSNKSATMVINSASFFLIQWETAQ 619
            +RN  I+    +   + +  A   +  ++  Q
Sbjct: 561  SRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQ 592