BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00030133
         (567 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   274   1e-71
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   270   2e-70
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   259   4e-67
ref|XP_006432122.1| hypothetical protein CICLE_v10003112mg, part...   255   5e-66
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   253   3e-65
ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|3...   250   2e-64
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...   250   2e-64
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...   248   7e-64
gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indi...   247   2e-63
gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobrom...   246   2e-63
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]       246   2e-63
emb|CBI37515.3| unnamed protein product [Vitis vinifera]              243   2e-62
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   243   2e-62
ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [A...   242   5e-62
ref|XP_004985595.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   241   7e-62
ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachy...   241   9e-62
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   241   9e-62
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...   239   3e-61
tpg|DAA43539.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...   239   5e-61
tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...   239   5e-61

>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  274 bits (700), Expect = 1e-71
 Identities = 127/162 (78%), Positives = 147/162 (90%)
 Frame = +2

Query: 80  MAGGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQ 259
           MAGGGGR +R LNVAEKPSVAKAVSGILSK    GG+RVRDGRSRYN+IFEFNYTI+NQ 
Sbjct: 1   MAGGGGRVIRVLNVAEKPSVAKAVSGILSKN-QPGGMRVRDGRSRYNKIFEFNYTIRNQP 59

Query: 260 VHMSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQ 439
             M FTSVTGHLMEL+F++RYRKWHSCDP+DLY+APV+K+VPEDK +I++TLE EAR CQ
Sbjct: 60  CQMLFTSVTGHLMELEFDERYRKWHSCDPLDLYNAPVRKFVPEDKLDIKRTLEAEARSCQ 119

Query: 440 WLILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           W++LWLDCDREGENIAFEV++VC +AN NLN+WRARFSALID
Sbjct: 120 WIVLWLDCDREGENIAFEVLDVCRQANHNLNVWRARFSALID 161


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score =  270 bits (690), Expect = 2e-70
 Identities = 125/162 (77%), Positives = 145/162 (89%)
 Frame = +2

Query: 80  MAGGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQ 259
           MAGGGGR +R LNVAEKPSVAKAVSGILSK    GG+RVRDGRSRYN+IFEFNYTI+NQ 
Sbjct: 1   MAGGGGRVIRVLNVAEKPSVAKAVSGILSKN-QPGGIRVRDGRSRYNKIFEFNYTIRNQP 59

Query: 260 VHMSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQ 439
             M FTSVTGHLME++F +RYRKWHSCDP+DLY+AP++K+VPEDK +I++TLE EAR CQ
Sbjct: 60  CQMLFTSVTGHLMEIEFHERYRKWHSCDPLDLYNAPIRKFVPEDKLDIKRTLEAEARSCQ 119

Query: 440 WLILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           W+ILWLDCDREGENIAFEV++VC +AN NL +WRARFSALID
Sbjct: 120 WIILWLDCDREGENIAFEVLDVCRQANHNLTVWRARFSALID 161


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  259 bits (661), Expect = 4e-67
 Identities = 121/165 (73%), Positives = 142/165 (86%)
 Frame = +2

Query: 71  TSTMAGGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQ 250
           +ST   GGGRP+  LNVAEKPSVAK+V+GILSK     GLR+R+GRSRYN+I+EFNY+I+
Sbjct: 27  SSTQMAGGGRPINVLNVAEKPSVAKSVAGILSKNQ---GLRIREGRSRYNKIYEFNYSIR 83

Query: 251 NQQVHMSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEAR 430
            Q  HM  TSVTGHLMELDF++RYRKWHSCDP DLYHAPV+K+VPEDK +I+KTLEEEAR
Sbjct: 84  GQPCHMLMTSVTGHLMELDFDERYRKWHSCDPADLYHAPVRKHVPEDKKDIKKTLEEEAR 143

Query: 431 KCQWLILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           +CQWL+LWLDCDREGENIAFEV+EVC   N +L + RARFSALID
Sbjct: 144 RCQWLVLWLDCDREGENIAFEVIEVCRAVNCHLVLRRARFSALID 188


>ref|XP_006432122.1| hypothetical protein CICLE_v10003112mg, partial [Citrus clementina]
           gi|557534244|gb|ESR45362.1| hypothetical protein
           CICLE_v10003112mg, partial [Citrus clementina]
          Length = 794

 Score =  255 bits (652), Expect = 5e-66
 Identities = 119/159 (74%), Positives = 139/159 (87%)
 Frame = +2

Query: 89  GGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHM 268
           GGGRP+  LNVAEKPSVAK+V+GILSK     GLR+R+GRSRYN+I+EFNY+I+ Q  HM
Sbjct: 3   GGGRPINVLNVAEKPSVAKSVAGILSKNQ---GLRIREGRSRYNKIYEFNYSIRGQPCHM 59

Query: 269 SFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLI 448
             TSVTGHLMELDF++RYRKWHSCDP DLYHAPV+K+VPEDK +I+KTLEEEAR+CQWL+
Sbjct: 60  LMTSVTGHLMELDFDERYRKWHSCDPADLYHAPVRKHVPEDKKDIKKTLEEEARRCQWLV 119

Query: 449 LWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           LWLDCDREGENIAFEV+EVC   N +L + RARFSALID
Sbjct: 120 LWLDCDREGENIAFEVIEVCRAVNCHLVLRRARFSALID 158


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score =  253 bits (645), Expect = 3e-65
 Identities = 122/157 (77%), Positives = 136/157 (86%)
 Frame = +2

Query: 95  GRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSF 274
           GR +  LNVAEKPSVAK+V+ ILS+     GLRVRDGRSRYNRIFEFNYTI+ Q  HM F
Sbjct: 3   GRGVTVLNVAEKPSVAKSVANILSRNQ---GLRVRDGRSRYNRIFEFNYTIRGQPCHMLF 59

Query: 275 TSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILW 454
           TSV GHLMEL+FEDRYRKWHSCDP DLYHAPV+K VPEDK +I++TLEEEAR+CQWL+LW
Sbjct: 60  TSVIGHLMELEFEDRYRKWHSCDPADLYHAPVRKSVPEDKKDIKRTLEEEARRCQWLVLW 119

Query: 455 LDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           LDCDREGENIAFEVV+VCT AN +L I RARFSALID
Sbjct: 120 LDCDREGENIAFEVVDVCTAANPHLTIKRARFSALID 156


>ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|355491701|gb|AES72904.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 587

 Score =  250 bits (639), Expect = 2e-64
 Identities = 121/158 (76%), Positives = 134/158 (84%)
 Frame = +2

Query: 92  GGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMS 271
           GGR +  LNVAEKPSVAK+V+ ILS+     GLRVRDGRSRYNRIFEFNYTI+ Q   M 
Sbjct: 2   GGRAITVLNVAEKPSVAKSVASILSRNQ---GLRVRDGRSRYNRIFEFNYTIRGQPCQML 58

Query: 272 FTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLIL 451
           FTSV GHLMELDF+DRYRKWHSCDP DL+ APV K+VPEDK +I++TLEEEAR+CQWLIL
Sbjct: 59  FTSVLGHLMELDFDDRYRKWHSCDPADLFQAPVHKFVPEDKKDIKRTLEEEARRCQWLIL 118

Query: 452 WLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           WLDCDREGENIAFEV+ VCT AN NL I RARFSALID
Sbjct: 119 WLDCDREGENIAFEVINVCTAANPNLTIKRARFSALID 156


>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
           gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
           Japonica Group]
          Length = 928

 Score =  250 bits (638), Expect = 2e-64
 Identities = 114/160 (71%), Positives = 139/160 (86%)
 Frame = +2

Query: 86  GGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVH 265
           GGGG  +R LNVAEKPSVAK+V+ ILS+   SGG+R R+GRSRYNR+FEF+Y+I  +  H
Sbjct: 4   GGGGGAIRVLNVAEKPSVAKSVAEILSRP--SGGMRSREGRSRYNRVFEFDYSIGGRACH 61

Query: 266 MSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWL 445
           M  TSVTGHLMEL+F+DR+R+WHSCDP DL+HAPV+K VP+DK +I++TLEEEARKCQWL
Sbjct: 62  MLVTSVTGHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARKCQWL 121

Query: 446 ILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           +LWLDCDREGENIA+EV+++C  AN  LNIWRARFSALID
Sbjct: 122 VLWLDCDREGENIAYEVIDICAGANSRLNIWRARFSALID 161


>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 923

 Score =  248 bits (633), Expect = 7e-64
 Identities = 113/160 (70%), Positives = 138/160 (86%)
 Frame = +2

Query: 86  GGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVH 265
           GGGG  +R LNVAEKPSVAK+V+ ILS+   SGG+R R+GRSRYNR+FEF Y+I  +  H
Sbjct: 4   GGGGGAIRVLNVAEKPSVAKSVAEILSRP--SGGMRSREGRSRYNRVFEFGYSIGGRACH 61

Query: 266 MSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWL 445
           M  TSVTGHLMEL+F+DR+R+WHSCDP DL+HAPV+K VP+DK +I++TLEEEAR CQWL
Sbjct: 62  MLVTSVTGHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARNCQWL 121

Query: 446 ILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           +LWLDCDREGENIA+EV+++C+ AN  LNIWRARFSALID
Sbjct: 122 VLWLDCDREGENIAYEVIDICSGANSRLNIWRARFSALID 161


>gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indica Group]
          Length = 897

 Score =  247 bits (630), Expect = 2e-63
 Identities = 113/160 (70%), Positives = 138/160 (86%)
 Frame = +2

Query: 86  GGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVH 265
           GGGG  +R LNVAEKPSVAK+V+ ILS+   SGG+R R+GRSRYNR+FEF+Y+I  +  H
Sbjct: 4   GGGGGAIRVLNVAEKPSVAKSVAEILSRP--SGGMRSREGRSRYNRVFEFDYSIGGRACH 61

Query: 266 MSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWL 445
           M  TSVTGHLMEL+F+DR+R+WHSCDP DL+HAPV+K VP+DK +I++TLEEEARKCQWL
Sbjct: 62  MLVTSVTGHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARKCQWL 121

Query: 446 ILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           +LWLDCDREGENIA+EV+++C  AN  LNIWRA FSALID
Sbjct: 122 VLWLDCDREGENIAYEVIDICAGANSRLNIWRACFSALID 161


>gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
          Length = 845

 Score =  246 bits (629), Expect = 2e-63
 Identities = 115/154 (74%), Positives = 136/154 (88%)
 Frame = +2

Query: 104 LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 283
           ++ LNVAEKPSVAK+VSGILS+     GLRVRDGRSR+NRIFEFNY+++ Q  HM FTSV
Sbjct: 5   IKVLNVAEKPSVAKSVSGILSRNQ---GLRVRDGRSRFNRIFEFNYSVRGQPCHMLFTSV 61

Query: 284 TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 463
           TGHLMEL+FEDR+RKWHSCDP DLYHAPV+K+VPEDK +I++TLEEEAR+CQWL+LWLDC
Sbjct: 62  TGHLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDC 121

Query: 464 DREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           DREGENIAFEV++VC   N +L I RARFSALI+
Sbjct: 122 DREGENIAFEVIDVCRAVNCHLTIRRARFSALIE 155


>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
          Length = 914

 Score =  246 bits (629), Expect = 2e-63
 Identities = 115/154 (74%), Positives = 136/154 (88%)
 Frame = +2

Query: 104 LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 283
           ++ LNVAEKPSVAK+VSGILS+     GLRVRDGRSR+NRIFEFNY+++ Q  HM FTSV
Sbjct: 5   IKVLNVAEKPSVAKSVSGILSRNQ---GLRVRDGRSRFNRIFEFNYSVRGQPCHMLFTSV 61

Query: 284 TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 463
           TGHLMEL+FEDR+RKWHSCDP DLYHAPV+K+VPEDK +I++TLEEEAR+CQWL+LWLDC
Sbjct: 62  TGHLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDC 121

Query: 464 DREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           DREGENIAFEV++VC   N +L I RARFSALI+
Sbjct: 122 DREGENIAFEVIDVCRAVNCHLTIRRARFSALIE 155


>emb|CBI37515.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  243 bits (621), Expect = 2e-62
 Identities = 112/154 (72%), Positives = 135/154 (87%)
 Frame = +2

Query: 104 LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 283
           ++ LNVAEKPSVAKAV+ ILS+     GLRVR+GRSRYN++FEFNY+I+ Q   M  TSV
Sbjct: 1   MKVLNVAEKPSVAKAVATILSRNQ---GLRVREGRSRYNKLFEFNYSIRGQHCQMVVTSV 57

Query: 284 TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 463
            GHLMEL+FEDR+RKWHSCDP  LYHAPV+K+VPEDK +I++TLEEEARKCQWL+LWLDC
Sbjct: 58  IGHLMELEFEDRFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDC 117

Query: 464 DREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           DREGENIAFEV+EVC + NR++++WRARFSALID
Sbjct: 118 DREGENIAFEVLEVCAQVNRHIDVWRARFSALID 151


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  243 bits (621), Expect = 2e-62
 Identities = 112/154 (72%), Positives = 135/154 (87%)
 Frame = +2

Query: 104 LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 283
           ++ LNVAEKPSVAKAV+ ILS+     GLRVR+GRSRYN++FEFNY+I+ Q   M  TSV
Sbjct: 1   MKVLNVAEKPSVAKAVATILSRNQ---GLRVREGRSRYNKLFEFNYSIRGQHCQMVVTSV 57

Query: 284 TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 463
            GHLMEL+FEDR+RKWHSCDP  LYHAPV+K+VPEDK +I++TLEEEARKCQWL+LWLDC
Sbjct: 58  IGHLMELEFEDRFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDC 117

Query: 464 DREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           DREGENIAFEV+EVC + NR++++WRARFSALID
Sbjct: 118 DREGENIAFEVLEVCAQVNRHIDVWRARFSALID 151


>ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
           gi|548834342|gb|ERM96738.1| hypothetical protein
           AMTR_s00202p00033660 [Amborella trichopoda]
          Length = 988

 Score =  242 bits (617), Expect = 5e-62
 Identities = 112/154 (72%), Positives = 135/154 (87%)
 Frame = +2

Query: 104 LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 283
           +R LNVAEKPSVAKAV+GILS+    G LRVR+GRSRYN+++EF + I+ Q+ HM FTSV
Sbjct: 81  IRVLNVAEKPSVAKAVAGILSQ----GRLRVREGRSRYNKVYEFEHAIRGQRCHMLFTSV 136

Query: 284 TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 463
           TGHLME+ F +RY+KWHSCDP DL+ AP++K+VP+DK +I++TLEEEAR CQWL+LWLDC
Sbjct: 137 TGHLMEIVFHERYKKWHSCDPADLFSAPIQKHVPQDKLDIKRTLEEEARTCQWLVLWLDC 196

Query: 464 DREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           DREGENIAFEVVEVCT ANRNL+IWRA FSALID
Sbjct: 197 DREGENIAFEVVEVCTTANRNLDIWRAHFSALID 230


>ref|XP_004985595.1| PREDICTED: DNA topoisomerase 3-alpha-like [Setaria italica]
          Length = 917

 Score =  241 bits (616), Expect = 7e-62
 Identities = 113/160 (70%), Positives = 134/160 (83%)
 Frame = +2

Query: 86  GGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVH 265
           GGGG  +R LNVAEKPSVAKAV+ ILS+    G ++ R GRS YNR+FEFNY I  +   
Sbjct: 4   GGGGGAIRVLNVAEKPSVAKAVAEILSR----GSMQSRAGRSPYNRVFEFNYAINGRACR 59

Query: 266 MSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWL 445
           M  TSVTGHLMEL+F+DR+R+WHSCDP DL+HAPV+K VP+DK  I++TLEEEAR+CQWL
Sbjct: 60  MLVTSVTGHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQAIKQTLEEEARRCQWL 119

Query: 446 ILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           +LWLDCDREGENIA+EV+EVCT AN +LNIWRARFSALID
Sbjct: 120 VLWLDCDREGENIAYEVIEVCTGANSHLNIWRARFSALID 159


>ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachypodium distachyon]
          Length = 924

 Score =  241 bits (615), Expect = 9e-62
 Identities = 114/161 (70%), Positives = 134/161 (83%)
 Frame = +2

Query: 83  AGGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQV 262
           +GGGG  +R LNVAEKPSVAK+V+ ILS+      ++ R GRSRYNRIFEFNY I  Q  
Sbjct: 4   SGGGGGAIRVLNVAEKPSVAKSVAEILSRR----AMQSRPGRSRYNRIFEFNYAIGGQAC 59

Query: 263 HMSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQW 442
           HM  TSVTGHLMELDF+DRYR+W+SCDPV+L+HAPV+K VP+DK +I++TLEEEAR CQW
Sbjct: 60  HMLVTSVTGHLMELDFDDRYRRWYSCDPVELFHAPVRKAVPQDKLDIKRTLEEEARTCQW 119

Query: 443 LILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           L+LWLDCDREGENIA+EVVE+C   N  LNIWRARFSALID
Sbjct: 120 LVLWLDCDREGENIAYEVVEICAGVNHCLNIWRARFSALID 160


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223533243|gb|EEF34998.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  241 bits (615), Expect = 9e-62
 Identities = 114/154 (74%), Positives = 132/154 (85%)
 Frame = +2

Query: 104 LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 283
           +  LNVAEKPSVAK+V+ ILS+    G LRVR+G+SRYN+IFEFNY I  Q  HM  TSV
Sbjct: 2   INVLNVAEKPSVAKSVATILSRNQQHG-LRVREGQSRYNKIFEFNYVINGQNCHMLVTSV 60

Query: 284 TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 463
           TGHLMEL+F+DR+RKWHSCDP DLYHAPV+K+VPEDK+ I++TLEEEAR+CQWLILWLDC
Sbjct: 61  TGHLMELEFDDRFRKWHSCDPADLYHAPVRKFVPEDKTNIKRTLEEEARRCQWLILWLDC 120

Query: 464 DREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           DREGENIAFEVV+VC  ANR L + RARFSALID
Sbjct: 121 DREGENIAFEVVDVCRSANRYLTVRRARFSALID 154


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
           gi|222856496|gb|EEE94043.1| hypothetical protein
           POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score =  239 bits (610), Expect = 3e-61
 Identities = 114/154 (74%), Positives = 132/154 (85%)
 Frame = +2

Query: 104 LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 283
           ++ LNVAEKPSVAK+V+ ILS+      LRVRDGRSRYN+IFEFNY+I  QQ HM  TSV
Sbjct: 2   IKVLNVAEKPSVAKSVATILSRNQ----LRVRDGRSRYNKIFEFNYSINGQQCHMLVTSV 57

Query: 284 TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 463
           TGHLME++FEDR+RKWHSCDP DLY APV+KYVPEDK +I++TLEEEAR+C WL+LWLDC
Sbjct: 58  TGHLMEVEFEDRFRKWHSCDPADLYTAPVRKYVPEDKLDIKRTLEEEARRCHWLVLWLDC 117

Query: 464 DREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           DREGENIAFEV+EVC   NRNL I RARFSALI+
Sbjct: 118 DREGENIAFEVMEVCKGVNRNLTIRRARFSALIE 151


>tpg|DAA43539.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 329

 Score =  239 bits (609), Expect = 5e-61
 Identities = 112/162 (69%), Positives = 134/162 (82%)
 Frame = +2

Query: 80  MAGGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQ 259
           M   GG  +R LNVAEKPSVAKAV+ ILS+  +      R GRS+YNRIFEFNY I  + 
Sbjct: 1   MQPDGGGAIRVLNVAEKPSVAKAVAEILSRRSAQS----RAGRSQYNRIFEFNYAINGRA 56

Query: 260 VHMSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQ 439
            HM  TSVTGHLMEL+F+DR+R+WHSCDP +L+HAPV+K VP+DK  I++TLEEEAR+CQ
Sbjct: 57  CHMLVTSVTGHLMELEFDDRFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQ 116

Query: 440 WLILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           WL+LWLDCDREGENIA+EV++VCTRAN +LNIWRARFSALID
Sbjct: 117 WLVLWLDCDREGENIAYEVIDVCTRANSHLNIWRARFSALID 158


>tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 915

 Score =  239 bits (609), Expect = 5e-61
 Identities = 112/162 (69%), Positives = 134/162 (82%)
 Frame = +2

Query: 80  MAGGGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQ 259
           M   GG  +R LNVAEKPSVAKAV+ ILS+  +      R GRS+YNRIFEFNY I  + 
Sbjct: 1   MQPDGGGAIRVLNVAEKPSVAKAVAEILSRRSAQS----RAGRSQYNRIFEFNYAINGRA 56

Query: 260 VHMSFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQ 439
            HM  TSVTGHLMEL+F+DR+R+WHSCDP +L+HAPV+K VP+DK  I++TLEEEAR+CQ
Sbjct: 57  CHMLVTSVTGHLMELEFDDRFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQ 116

Query: 440 WLILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 565
           WL+LWLDCDREGENIA+EV++VCTRAN +LNIWRARFSALID
Sbjct: 117 WLVLWLDCDREGENIAYEVIDVCTRANSHLNIWRARFSALID 158