BLASTX nr result

ID: Rehmannia26_contig00029940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029940
         (330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006447106.1| hypothetical protein CICLE_v10015317mg [Citr...    59   9e-07
ref|XP_002532192.1| conserved hypothetical protein [Ricinus comm...    58   1e-06
ref|XP_002298611.2| hypothetical protein POPTR_0001s34060g [Popu...    55   1e-05

>ref|XP_006447106.1| hypothetical protein CICLE_v10015317mg [Citrus clementina]
           gi|568831554|ref|XP_006470027.1| PREDICTED: putative
           UPF0481 protein At3g02645-like isoform X1 [Citrus
           sinensis] gi|568831556|ref|XP_006470028.1| PREDICTED:
           putative UPF0481 protein At3g02645-like isoform X2
           [Citrus sinensis] gi|557549717|gb|ESR60346.1|
           hypothetical protein CICLE_v10015317mg [Citrus
           clementina]
          Length = 429

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +2

Query: 23  SKPESFKIDNPRHLLELAMNALFHKTDQDPNQDSSAQTIQVDPETFLSEAKSASDLEIYG 202
           +KPE F++ N +H+L+L  ++L    ++     +  +   + P        SA  L+  G
Sbjct: 213 TKPEQFEVRNIKHILDLLRHSLVLPLEKGYKCSNRKREWDICP--------SAMTLQESG 264

Query: 203 VEFQAAKSKNLMDIQF-SNGVFTIPPLTIQESTATRFWNFLVF 328
           ++ Q   S +++DI+F SNGV  IPPL IQE+T T F N + F
Sbjct: 265 IKLQRVNSASILDIKFRSNGVLEIPPLLIQETTETLFRNLISF 307


>ref|XP_002532192.1| conserved hypothetical protein [Ricinus communis]
           gi|223528124|gb|EEF30195.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 461

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
 Frame = +2

Query: 2   ALKFFN--ISKP----ESFKIDNPRHLLELAMNALFHKTDQDPNQDSSAQTIQVDPETFL 163
           AL+FF+  + +P    + FK    +HLL+L  +         PN+D+ +         FL
Sbjct: 222 ALEFFDYAVERPAEFLDRFKDKKGKHLLDLFRSTFIPPPQGKPNEDAYSP--------FL 273

Query: 164 SEAKSASDLEIYGVEFQAAKSKNLMDIQFSNGVFTIPPLTIQESTATRFWNFLVF 328
              +SA  L + G++F+  ++ + +DI FS+GV  IPPLT+ + T++   N + F
Sbjct: 274 QLIQSAKKLRLSGIKFKPKRTDSFLDISFSHGVLRIPPLTVDDFTSSFLLNCVAF 328


>ref|XP_002298611.2| hypothetical protein POPTR_0001s34060g [Populus trichocarpa]
           gi|550348812|gb|EEE83416.2| hypothetical protein
           POPTR_0001s34060g [Populus trichocarpa]
          Length = 436

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
 Frame = +2

Query: 2   ALKFF-NI--SKPESFKIDN--PRHLLELAMNALFHKTDQDPNQDSSAQTIQVDPETFLS 166
           AL FF NI  S P S    N  P+HLL+L  N L   + +D            D ET   
Sbjct: 214 ALPFFQNIFSSNPPSIVPSNRGPKHLLDLLRNWLVLSSGKDE-----------DGETGWE 262

Query: 167 EAKSASDLEIYGVEFQAAKSKNLMDIQFSNGVFTIPPLTIQESTATRFWNFLVF 328
              S ++L   G++ +  KS +++DI+F NGV  IPPL IQE+T     N + +
Sbjct: 263 PIPSVTNLVDAGIKLKVGKSSSILDIKFQNGVLEIPPLLIQETTEVIIRNLISY 316


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