BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029891
         (459 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14
ref|XP_006381622.1| pentatricopeptide repeat-containing family p...    80   2e-13
ref|XP_002326124.1| predicted protein [Populus trichocarpa]            80   2e-13
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi...    79   8e-13
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr...    78   1e-12
gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, put...    77   3e-12
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...    76   4e-12
gb|EPS73770.1| hypothetical protein M569_00985 [Genlisea aurea]        76   5e-12
gb|EMJ06024.1| hypothetical protein PRUPE_ppa004064mg [Prunus pe...    76   5e-12
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...    75   9e-12
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]                       74   2e-11
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ...    74   3e-11
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar...    74   3e-11
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps...    73   5e-11
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]      72   6e-11
gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]      72   8e-11
ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_006396122.1| hypothetical protein EUTSA_v10002477mg [Eutr...    72   8e-11
ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10

>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Solanum tuberosum]
           gi|565370447|ref|XP_006351832.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Solanum tuberosum]
          Length = 550

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 40/78 (51%), Positives = 57/78 (73%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  EA+ I+ KMLS+GCVPD+IT++CL SCL KAGM +EAY++    S   +  LS
Sbjct: 473 CMKGRMLEAMAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKVRLTPSKDLNPDLS 532

Query: 277 SSERTTQFSPNMNTPVAI 224
           SS+++  F  +++ PVA+
Sbjct: 533 SSKQSVPFRTSLDIPVAV 550


>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Solanum lycopersicum]
          Length = 550

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  EA+ I+ KMLS+GCVPD+ITI+CL SCL KAGM +EAY++    S   +  LS
Sbjct: 473 CMKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVKEAYKVRLIPSKDLNPDLS 532

Query: 277 SSERTTQFSPNMNTPVAI 224
            S+    F  +++ PVA+
Sbjct: 533 PSKLFIPFRTSLDIPVAV 550


>ref|XP_006381622.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550336330|gb|ERP59419.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 511

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/78 (50%), Positives = 50/78 (64%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           C+KGR FEAI I+ +ML+  C PDNIT+N L+SCL KAGM  EAY I + A    +  LS
Sbjct: 434 CVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNLGLS 493

Query: 277 SSERTTQFSPNMNTPVAI 224
           S E+      N + PVA+
Sbjct: 494 SFEKAIPLRTNTDIPVAV 511


>ref|XP_002326124.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/78 (50%), Positives = 50/78 (64%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           C+KGR FEAI I+ +ML+  C PDNIT+N L+SCL KAGM  EAY I + A    +  LS
Sbjct: 435 CVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNLGLS 494

Query: 277 SSERTTQFSPNMNTPVAI 224
           S E+      N + PVA+
Sbjct: 495 SFEKAIPLRTNTDIPVAV 512


>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Citrus sinensis]
           gi|568841566|ref|XP_006474729.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Citrus sinensis]
          Length = 595

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/77 (49%), Positives = 49/77 (63%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  EAI I+ KML++GC PD+IT+N L+SCL K GM  EA+ I Q AS   +  L 
Sbjct: 518 CMKGRMVEAISIFNKMLTIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDLNLQLP 577

Query: 277 SSERTTQFSPNMNTPVA 227
           S ++      N + PVA
Sbjct: 578 SWKKAVPLRTNTDIPVA 594


>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
           gi|557556032|gb|ESR66046.1| hypothetical protein
           CICLE_v10007804mg [Citrus clementina]
          Length = 595

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/77 (49%), Positives = 48/77 (62%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  EAI I+ KML +GC PD+IT+N L+SCL K GM  EA+ I Q AS   +  L 
Sbjct: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577

Query: 277 SSERTTQFSPNMNTPVA 227
           S ++      N + PVA
Sbjct: 578 SWKKAVPLRTNTDIPVA 594


>gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 592

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/77 (50%), Positives = 47/77 (61%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR FEAI I+ KMLS+GC PD++T+N L+SCL KAGM  EA  I + AS       S
Sbjct: 515 CMKGRMFEAISIFNKMLSVGCTPDDVTVNSLISCLLKAGMPSEASRITKMASEDMKLGSS 574

Query: 277 SSERTTQFSPNMNTPVA 227
             E  +    N   PVA
Sbjct: 575 LLENNSPLRINRGVPVA 591


>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/77 (50%), Positives = 47/77 (61%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  EAI I+ +ML  GC PD+IT+  L+SCL KAGM  EAY I Q AS   +  L 
Sbjct: 494 CMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDFNLGLK 553

Query: 277 SSERTTQFSPNMNTPVA 227
           S +R      N + PVA
Sbjct: 554 SLKRNVPLRTNTDIPVA 570


>gb|EPS73770.1| hypothetical protein M569_00985 [Genlisea aurea]
          Length = 301

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/50 (72%), Positives = 42/50 (84%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQN 308
           CMKGR  EAI IY+KM+ +GC PD+IT +CLVSCLRKAGMAREA  IE+N
Sbjct: 247 CMKGRMVEAIRIYEKMVYVGCRPDDITWSCLVSCLRKAGMAREANRIERN 296


>gb|EMJ06024.1| hypothetical protein PRUPE_ppa004064mg [Prunus persica]
          Length = 532

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  EAI  +KKML++GC PDNIT++ L+SCL KAGM  EA+ I++ A    +  +S
Sbjct: 455 CMKGRMSEAISNFKKMLAIGCAPDNITVDSLISCLMKAGMPNEAHHIKKIACEDLNLGMS 514

Query: 277 SSERTTQFSPNMNTPVAI 224
            S R      N    VA+
Sbjct: 515 PSRRADHLRANAKITVAV 532


>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/78 (48%), Positives = 51/78 (65%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  EA+ I+KKML++GC PDNITI+ LV+CL KAG   EA+ I Q AS   +   S
Sbjct: 455 CMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASEDLNLSFS 514

Query: 277 SSERTTQFSPNMNTPVAI 224
           S  +T  F   + T +++
Sbjct: 515 SLRKT--FPMRVKTDISV 530


>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/66 (51%), Positives = 46/66 (69%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR FEA+ I+ KM+++GC PD IT++ L+SCL KAGMA+EAY + Q A  G  + + 
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVV 522

Query: 277 SSERTT 260
             E  T
Sbjct: 523 PPETKT 528


>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331650|gb|EFH62069.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 536

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 32/54 (59%), Positives = 42/54 (77%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNG 296
           CMKGR FEA+ I+ KM+++GC PD IT++ L+SCL KAGMA+EAY + Q A  G
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAHKG 516


>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|42570711|ref|NP_973429.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
           [Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330250896|gb|AEC05990.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|330250897|gb|AEC05991.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 32/54 (59%), Positives = 42/54 (77%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNG 296
           CMKGR FEA+ I+ KM+++GC PD IT++ L+SCL KAGMA+EAY + Q A  G
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG 516


>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
           gi|565479514|ref|XP_006297397.1| hypothetical protein
           CARUB_v10013421mg [Capsella rubella]
           gi|482566105|gb|EOA30294.1| hypothetical protein
           CARUB_v10013421mg [Capsella rubella]
           gi|482566106|gb|EOA30295.1| hypothetical protein
           CARUB_v10013421mg [Capsella rubella]
          Length = 535

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 32/51 (62%), Positives = 40/51 (78%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNA 305
           CMKGR FEA+ I+ KM+++GC PD IT+N L+SCL KAGMA EAY + Q A
Sbjct: 464 CMKGRMFEAVSIFHKMVAIGCSPDKITVNSLLSCLLKAGMAEEAYHLNQIA 514


>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
          Length = 570

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 31/61 (50%), Positives = 44/61 (72%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  +AIG++ KML++GC PD IT++CL+SCL KAGM  EA+ I++      +  +S
Sbjct: 494 CMKGRMVDAIGVFYKMLAVGCAPDKITVHCLMSCLLKAGMPNEAFHIKETVMKSLNVGMS 553

Query: 277 S 275
           S
Sbjct: 554 S 554


>gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]
          Length = 732

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTH---S 287
           CMKGR  EAIG++ KM ++GC P++ T NCL+SCL KAGM  EA+ I+++A    +    
Sbjct: 656 CMKGRMLEAIGVFNKMKAVGCAPESRTANCLISCLLKAGMPNEAFSIKKSAIEDLNLGTV 715

Query: 286 CLSSSERTTQFSPNMNTPVAI 224
           CL    R+   S N   P+A+
Sbjct: 716 CL----RSDHLSTNAGIPMAV 732


>ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Glycine max]
           gi|571448762|ref|XP_006577947.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Glycine max]
           gi|571448764|ref|XP_006577948.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X3 [Glycine max]
           gi|571448766|ref|XP_006577949.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X4 [Glycine max]
          Length = 510

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/78 (46%), Positives = 52/78 (66%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  EAIGI+ KML++GC PD IT+N L SCL KAGM  EA  +++  +      ++
Sbjct: 433 CMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKKVLAQNLTLGIT 492

Query: 277 SSERTTQFSPNMNTPVAI 224
           SS+++   + N + PVA+
Sbjct: 493 SSKKSYHETTNESIPVAV 510


>ref|XP_006396122.1| hypothetical protein EUTSA_v10002477mg [Eutrema salsugineum]
           gi|557096393|gb|ESQ36901.1| hypothetical protein
           EUTSA_v10002477mg [Eutrema salsugineum]
          Length = 535

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/64 (53%), Positives = 46/64 (71%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIEQNASNGTHSCLS 278
           CMKGR  EAI I+ KM+++GC PD IT++ L SCL KAGMA+EAY++ Q A  G  + ++
Sbjct: 462 CMKGRMCEAISIFHKMVAIGCSPDKITVSSLSSCLLKAGMAKEAYQLNQFAVKGQSNDVA 521

Query: 277 SSER 266
             ER
Sbjct: 522 PLER 525


>ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Glycine max]
          Length = 581

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
 Frame = -3

Query: 457 CMKGRTFEAIGIYKKMLSMGCVPDNITINCLVSCLRKAGMAREAYEIE----QNASNGTH 290
           CMKGR  EAIG + KML++GC PD IT+N L SCL KAGM  EA  ++    QN + GT 
Sbjct: 434 CMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLAQNLTLGTT 493

Query: 289 SCLSSSERTTQFSP 248
           S   S   TT   P
Sbjct: 494 SSKKSYHETTYVFP 507