BLASTX nr result

ID: Rehmannia26_contig00029887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029887
         (529 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355567.1| PREDICTED: exonuclease 1-like [Solanum tuber...    62   8e-08
ref|XP_006377255.1| hypothetical protein POPTR_0011s03035g [Popu...    57   2e-06

>ref|XP_006355567.1| PREDICTED: exonuclease 1-like [Solanum tuberosum]
          Length = 755

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
 Frame = -2

Query: 471 GIETKPFTILPNSVCKPCISLHKDLDSDREPGKATFVNENGVVRSSYFIKKSREENGKEN 292
           G+++ P   L + +CKPCI+LHK+   D    K     +  +VRSSYF+K +++E+ +++
Sbjct: 460 GLQSVP---LQHPICKPCITLHKEHALDLSENKIRATKKKVIVRSSYFLKNNKKEDIQDD 516

Query: 291 KSDVE------------KNVASKLDDVISNHVYEPI--------------SVLHDKTSRK 190
           KS++             +N    + D ++  V   +              S  +  T +K
Sbjct: 517 KSEINVVANDKSHSSIWENDYDSMPDAMNGAVVAAVKNAISQSSYFQSKPSARNGDTEQK 576

Query: 189 DEKRVAVKSPYFRHNTENANCEG 121
           + KR  ++S YF+ N  N N +G
Sbjct: 577 ENKRAILRSSYFQKNLANDNSQG 599


>ref|XP_006377255.1| hypothetical protein POPTR_0011s03035g [Populus trichocarpa]
           gi|550327463|gb|ERP55052.1| hypothetical protein
           POPTR_0011s03035g [Populus trichocarpa]
          Length = 294

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/115 (26%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
 Frame = -2

Query: 438 NSVCKPCISLHKDLDSDREP----GKATFVNENGVVRSSYFIKKSREENGKENKSDVEKN 271
           +S+  PC +L K+ +++  P    GK    N+  +VRS +F  KS  +NG++NK ++   
Sbjct: 18  HSMRGPCQALLKECNNENAPISVEGKTRTENKRVIVRSRFFKHKSMNKNGQDNKQEM--- 74

Query: 270 VASKLDDVISNHVYEPISVLHDKTSRKDEKRVAVKSPYFRHNTENANCEGEKSKE 106
              ++ D +++  +E  S+L    +R   + + ++S +F+H + N N +G K ++
Sbjct: 75  --IRVKDDVASDTFED-SILEGSENRTGNREITIRSSFFQHKSVNENDQGNKQEK 126


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