BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029837
         (460 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002453541.1| hypothetical protein SORBIDRAFT_04g007670 [S...    65   7e-09
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   5e-08
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    63   5e-08
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    57   3e-06
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    55   1e-05

>ref|XP_002453541.1| hypothetical protein SORBIDRAFT_04g007670 [Sorghum bicolor]
            gi|241933372|gb|EES06517.1| hypothetical protein
            SORBIDRAFT_04g007670 [Sorghum bicolor]
          Length = 982

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
 Frame = +1

Query: 4    CCMCGEAVETLDHLMFSCSRAVLVWKL---SPVCWEETHRHHSPFQQWWIKICSRNGNKM 174
            C +C +  ET DHL+ SC  A  VW         W +T    SPF  WW+    R   ++
Sbjct: 860  CALCDQEAETADHLLLSCVFAREVWDRLLRRAHIWLDTPTGVSPFVDWWLSSRKRLPREL 919

Query: 175  LRERVELSVYILWWLWKTRNLWVFQKVWKSEKEVVEGAVTE 297
             R    L++ + W LWK RN  VF     S  +VV+G + E
Sbjct: 920  RRGFDSLALLVAWSLWKERNRRVFDAAASSVDDVVKGVIAE 960


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
 Frame = +1

Query: 4    CCMCGEAVETLDHLMFSCSRAVLVWKLSPVCWEETHRHHSPFQQWWIKICSRNGNKMLRE 183
            C  CGE  ET +HL++ C  +   W +SP+     +     F+ W   +   + +    E
Sbjct: 1092 CPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKDT---E 1148

Query: 184  RVELSVYILWWLWKTRNLWVFQKVWKSEKEVVEGAVTEWREFQEVVSNDFMV------KK 345
               L   I W +W  RN WVF+K   + +EVVE AV    EF+E  ++   V      + 
Sbjct: 1149 WWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHEN 1208

Query: 346  NPPVRAIGPVCISVSVAFSGENFVGFGGVAVDDKRKVI 459
               V  +G V ++V  A      +G GGV  D +  V+
Sbjct: 1209 GWSVPPVGMVKLNVDAAVFKHVGIGMGGVVRDAEGDVL 1246


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1    ICCMCGEAVETLDHLMFSCSRAVLVWKLSPVCWEE-THRHHSPFQQWWIKICSRNGNKML 177
            +C  CG   E+++HL+F C  +  +W LSP+   E     +S F  +   +       + 
Sbjct: 963  VCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIA 1022

Query: 178  RERVELSVYILWWLWKTRNLWVFQKVWKSEKEVVEGAVTEWREFQEVVSNDFMVKKNPP 354
             + +E+  +ILW++WK+RN ++F+ V +S + +++ A+ E   +++  S +   +  PP
Sbjct: 1023 EDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQEANVWKQANSKEVATEYPPP 1081


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
 Frame = +1

Query: 4    CCMCGEAVETLDHLMFSCSRAVLVWKLSPVCWEETHRHHSPFQQWWIKICSRNGNKMLRE 183
            C  C E +ET++HL+F C  A  VW LS +    T    S F      I +     + R 
Sbjct: 1036 CLFCKEEIETINHLLFQCPFARQVWALSLIQAPATGFGTSIFSNINHVIQNSQNFGIPRH 1095

Query: 184  RVELSVYILWWLWKTRNLWVFQKVWKSEKEVVEGAVTE---WREFQEVVSNDFMV---KK 345
               +S ++LW +WK RN  +FQ    +  E+V  A  E   W   QE  S        K 
Sbjct: 1096 MRTVSPWLLWEIWKNRNKTLFQGTGLTSSEIVAKAYEECNLWINAQEKSSGGVSPSEHKW 1155

Query: 346  NPPVRAIGPVCISVSVAFSGE-NFVGFGGVAVDDKRKVI 459
            NPP    G +  ++ VA+S +    G   V  D   +V+
Sbjct: 1156 NPP--PAGELKCNIGVAWSRQKQLAGVSWVLRDSMGQVL 1192


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 13/165 (7%)
 Frame = +1

Query: 4    CCMCGEAVETLDHLMFSCSRAVLVWKLSPVCWEETHRHHSPFQQWWIKICSRNGNKMLRE 183
            C  C    ET++H++F+C  A  +W LS   W   H      ++    + +   N  L  
Sbjct: 1400 CPRCPTEEETINHVLFTCPYAASIWGLSNFPWLPGHTFSQDTEENISFLINSFSNNTLNT 1459

Query: 184  RVELS-VYILWWLWKTRNLWVFQKVWKSEKEVV---EGAVTEW------REFQEVV---S 324
               L+  +++W LWK RN  VF K  +S   VV   E  V EW      RE   V+   S
Sbjct: 1460 EQRLAPFWLIWRLWKARNNLVFNKFSESCSRVVTQTEAEVNEWLQSVNRREDASVLTRSS 1519

Query: 325  NDFMVKKNPPVRAIGPVCISVSVAFSGENFVGFGGVAVDDKRKVI 459
            +   V+   PV  +  V  +    F+G N    GG  + + + ++
Sbjct: 1520 HRANVRWKKPVFPL--VKCNFDAGFTGNNTQSTGGWIIPETKALL 1562