BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029757
         (384 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]   140   4e-40
emb|CAN80130.1| hypothetical protein VITISV_001989 [Vitis vinifera]   140   1e-39
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              141   1e-39
emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]   141   5e-39
emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera]   137   1e-38
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]   139   2e-38
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]   137   5e-38
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...   138   8e-38
emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera]   129   6e-36
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594...   132   4e-35
ref|XP_006604981.1| PREDICTED: uncharacterized protein LOC102661...   127   1e-34
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662...   131   1e-34
gb|AAP43914.1| integrase [Gossypium raimondii]                        127   1e-34
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     136   2e-34
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   136   2e-34
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...   136   4e-34
gb|AAP43919.1| integrase [Gossypium hirsutum]                         122   7e-34
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  131   9e-34
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         130   1e-33
gb|AAD17351.1| contains similarity to retrovirus-related polypro...   146   2e-33

>emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]
          Length = 364

 Score =  140 bits (354), Expect(2) = 4e-40
 Identities = 62/83 (74%), Positives = 75/83 (90%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL+GA LNYPTYDKELYALV AL+TWQHYLWPKEF+I+T H+SLK+LKGQ KLN++HA W
Sbjct: 13  KLNGATLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDHESLKHLKGQGKLNRRHAKW 72

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE FPY+++YKQ K N+VAD
Sbjct: 73  VEFIETFPYVIKYKQCKENIVAD 95



 Score = 49.7 bits (117), Expect(2) = 4e-40
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKGAMG 384
           Y L+STL+AK+LGFE+VKELY +D DFA  + A +K A G
Sbjct: 101 YALVSTLNAKLLGFEYVKELYANDNDFASVYGACEKTAFG 140


>emb|CAN80130.1| hypothetical protein VITISV_001989 [Vitis vinifera]
          Length = 340

 Score =  140 bits (354), Expect(2) = 1e-39
 Identities = 61/84 (72%), Positives = 75/84 (89%)
 Frame = +2

Query: 2   NKLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHAC 181
           +KL+G  LNYPTYDKELYALV AL+TW HYLWPKEF+I+T H+SLK+LKGQ KLN++HA 
Sbjct: 14  DKLNGTTLNYPTYDKELYALVRALETWXHYLWPKEFVIHTDHESLKHLKGQGKLNRRHAK 73

Query: 182 WLEFIEMFPYILRYKQGKTNVVAD 253
           W+EFIE FPY+++YKQGK N+VAD
Sbjct: 74  WVEFIETFPYVIKYKQGKENIVAD 97



 Score = 48.5 bits (114), Expect(2) = 1e-39
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKGAMG 384
           Y L+STL+AK+LGFE+VKELY++D DFA  + A +K   G
Sbjct: 103 YALVSTLNAKLLGFEYVKELYVNDDDFASVYGACEKTTFG 142


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  141 bits (356), Expect(2) = 1e-39
 Identities = 64/83 (77%), Positives = 75/83 (90%)
 Frame = +2

Query: 5    KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
            KL GA LNYPTYDKELYALV AL+T QHYLWPKEF+I+T H+SLK+LKGQQKLNK+HA W
Sbjct: 1234 KLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARW 1293

Query: 185  LEFIEMFPYILRYKQGKTNVVAD 253
            +EFIE FPY+++YK+GK NVVAD
Sbjct: 1294 VEFIETFPYVIKYKKGKDNVVAD 1316



 Score = 47.4 bits (111), Expect(2) = 1e-39
 Identities = 21/40 (52%), Positives = 30/40 (75%)
 Frame = +1

Query: 265  YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKGAMG 384
            Y L+S+LDAK+LGFEH+K LY +D DF + + + +K A G
Sbjct: 1322 YVLLSSLDAKLLGFEHIKSLYANDSDFEKIYSSCEKFAFG 1361


>emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]
          Length = 750

 Score =  141 bits (356), Expect(2) = 5e-39
 Identities = 62/83 (74%), Positives = 75/83 (90%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL+GAALNYP YDKELYALV AL+TWQHYLWPKEF+I+  H+SLK+LKGQ KLN++HA W
Sbjct: 354 KLNGAALNYPKYDKELYALVRALETWQHYLWPKEFVIHADHESLKHLKGQGKLNRRHAKW 413

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE FPY+++YKQGK N+VAD
Sbjct: 414 VEFIETFPYVIKYKQGKENIVAD 436



 Score = 45.4 bits (106), Expect(2) = 5e-39
 Identities = 21/39 (53%), Positives = 30/39 (76%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKGAM 381
           Y L+STL+AK+LGFE+V+ELY +D DFA  + A  +G +
Sbjct: 442 YALVSTLNAKLLGFEYVEELYANDDDFANVYGASHEGGL 480


>emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera]
          Length = 337

 Score =  137 bits (344), Expect(2) = 1e-38
 Identities = 60/83 (72%), Positives = 74/83 (89%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           K++GA LNYPTYDKELYALV AL+TWQHYLW KEF+I+T H+SLK+LKGQ KLN++HA W
Sbjct: 12  KVNGATLNYPTYDKELYALVRALETWQHYLWTKEFVIHTDHESLKHLKGQGKLNRRHAKW 71

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE F Y+++YKQGK N+VAD
Sbjct: 72  VEFIETFSYVIKYKQGKENIVAD 94



 Score = 48.9 bits (115), Expect(2) = 1e-38
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKGAMG 384
           Y L+STL+AK+LGFE+VKELY +D DFA  + A +K A G
Sbjct: 100 YALVSTLNAKLLGFEYVKELYANDDDFASVYGACEKVAFG 139


>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
          Length = 1281

 Score =  139 bits (349), Expect(2) = 2e-38
 Identities = 61/83 (73%), Positives = 74/83 (89%)
 Frame = +2

Query: 5    KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
            KL+G  LNYPTYDKELYALV AL+TWQHYLWPKEF+I+T H+SLK+LKGQ KLN++HA W
Sbjct: 761  KLNGTTLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDHESLKHLKGQGKLNRRHAKW 820

Query: 185  LEFIEMFPYILRYKQGKTNVVAD 253
            +EFIE F Y+++YKQGK N+VAD
Sbjct: 821  VEFIETFLYVIKYKQGKENIVAD 843



 Score = 46.2 bits (108), Expect(2) = 2e-38
 Identities = 22/36 (61%), Positives = 29/36 (80%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KK 372
           Y L+STL+AK+LGFE+VKELY +D DFA  + A +K
Sbjct: 849 YALVSTLNAKLLGFEYVKELYANDDDFASVYGACEK 884


>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
          Length = 1115

 Score =  137 bits (346), Expect(2) = 5e-38
 Identities = 60/83 (72%), Positives = 72/83 (86%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL+   LNYPTYDKELYALV AL+TWQHYLWPKEF+I+T H+SLK+LKGQ KLN+ HA W
Sbjct: 689 KLNXTTLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDHESLKHLKGQGKLNRXHAKW 748

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE FPY+++YKQGK N+V D
Sbjct: 749 VEFIETFPYVIKYKQGKENIVVD 771



 Score = 45.8 bits (107), Expect(2) = 5e-38
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKGAMG 384
           Y L+STL+AK+LGFE+VKELY +D DF+  + A +K   G
Sbjct: 777 YALVSTLNAKLLGFEYVKELYANDDDFSSVYGACEKITFG 816


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score =  138 bits (348), Expect(2) = 8e-38
 Identities = 62/83 (74%), Positives = 73/83 (87%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL GA LNYPTYDKELYALV AL+ WQHYLWPK F+I+T H+SLK+LKGQQKLNK+HA W
Sbjct: 743 KLGGATLNYPTYDKELYALVRALQRWQHYLWPKVFVIHTDHESLKHLKGQQKLNKRHARW 802

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE F Y+++YK+GK NVVAD
Sbjct: 803 VEFIETFAYVIKYKKGKDNVVAD 825



 Score = 44.3 bits (103), Expect(2) = 8e-38
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKGAMG 384
           YTL+STL+ K++GFE +KE+Y  D DF E + A +K A G
Sbjct: 831 YTLLSTLNVKLMGFEQIKEVYETDHDFQEVYKACEKFASG 870


>emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera]
          Length = 366

 Score =  129 bits (323), Expect(2) = 6e-36
 Identities = 58/83 (69%), Positives = 69/83 (83%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL+GA LNYPTYDKELYALV AL+TWQHYLW KEF+I+T H SLK+LK Q KLN +H  W
Sbjct: 13  KLNGATLNYPTYDKELYALVRALETWQHYLWSKEFVIHTDHDSLKHLKRQGKLNIRHPKW 72

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE F Y+++YKQGK N+V D
Sbjct: 73  VEFIETFSYVIKYKQGKENIVVD 95



 Score = 47.8 bits (112), Expect(2) = 6e-36
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKGAMG 384
           Y L+STL+AK+LGFE+VKELY +D D A  + A +K A G
Sbjct: 101 YALVSTLNAKLLGFEYVKELYANDDDLASVYGACEKAAFG 140


>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
          Length = 1191

 Score =  132 bits (331), Expect(2) = 4e-35
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +2

Query: 5    KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
            K SGA LNY TYDKELYALV AL TWQHYLWP+EF++ T H+SLKYLK Q KL+++HA W
Sbjct: 753  KPSGATLNYLTYDKELYALVRALATWQHYLWPREFVVKTDHESLKYLKSQGKLSRRHAKW 812

Query: 185  LEFIEMFPYILRYKQGKTNVVAD 253
            +EFIE FPY++ YKQGK NVVAD
Sbjct: 813  VEFIETFPYVIAYKQGKENVVAD 835



 Score = 42.0 bits (97), Expect(2) = 4e-35
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKG 375
           Y LISTL +K+LGF+ +K LY +D DF E F   K G
Sbjct: 841 YVLISTLTSKLLGFDQIKFLYANDSDFGEIFAECKLG 877


>ref|XP_006604981.1| PREDICTED: uncharacterized protein LOC102661110 [Glycine max]
          Length = 766

 Score =  127 bits (320), Expect(2) = 1e-34
 Identities = 56/83 (67%), Positives = 72/83 (86%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL+G AL+Y TYDKEL+AL+ AL+TWQHYL PKEF+I++ H+SLKYLKGQ KLNK+HA W
Sbjct: 487 KLNGVALSYSTYDKELHALIRALQTWQHYLLPKEFVIHSDHESLKYLKGQGKLNKRHAKW 546

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EF+E FPY++R+K+GK NV  D
Sbjct: 547 VEFLEKFPYVIRHKKGKNNVFTD 569



 Score = 44.3 bits (103), Expect(2) = 1e-34
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAE 351
           Y L+STL+ K LGFE++KELY HD DF++
Sbjct: 575 YALLSTLETKFLGFEYIKELYDHDADFSD 603


>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
          Length = 612

 Score =  131 bits (329), Expect(2) = 1e-34
 Identities = 59/83 (71%), Positives = 73/83 (87%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL  AALNY TYDK+LYALV AL+TWQHYL PKEF+I++ H+SLKYLKGQ KLNK+HA W
Sbjct: 205 KLGAAALNYSTYDKKLYALVRALQTWQHYLLPKEFVIHSDHESLKYLKGQGKLNKRHAKW 264

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EF+E FPY++++K+GK NVVAD
Sbjct: 265 VEFLEQFPYVIKHKKGKGNVVAD 287



 Score = 40.8 bits (94), Expect(2) = 1e-34
 Identities = 16/36 (44%), Positives = 27/36 (75%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KK 372
           + L++ L+ K+ G E +K++Y+HD+DFAE F A +K
Sbjct: 293 HALLAMLETKLFGLESLKDMYVHDVDFAEIFAACEK 328


>gb|AAP43914.1| integrase [Gossypium raimondii]
          Length = 340

 Score =  127 bits (320), Expect(2) = 1e-34
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL GA LNY TYDKELYALV AL+ WQHYL  KEF+I+T H+SLK+LKGQ KLNK+HA W
Sbjct: 13  KLGGAHLNYSTYDKELYALVRALEVWQHYLLRKEFVIHTDHESLKHLKGQGKLNKRHARW 72

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE FPY +RYK+GK N+VAD
Sbjct: 73  VEFIESFPYGIRYKKGKDNIVAD 95



 Score = 44.3 bits (103), Expect(2) = 1e-34
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKGA 378
           YTL+STL  K+LGFE++K+LY  D DFA  + A + GA
Sbjct: 101 YTLLSTLHTKLLGFEYLKDLYATDSDFASIYDACEHGA 138


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  136 bits (342), Expect(2) = 2e-34
 Identities = 59/83 (71%), Positives = 73/83 (87%)
 Frame = +2

Query: 5    KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
            KL GA LNY  YDKELYALV AL+TWQHYLWPKEF+I++ H++LKYLKGQ KLN++HA W
Sbjct: 1045 KLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKW 1104

Query: 185  LEFIEMFPYILRYKQGKTNVVAD 253
            +EFIE FPY+++YK+GK N+VAD
Sbjct: 1105 VEFIETFPYVVKYKKGKENIVAD 1127



 Score = 35.4 bits (80), Expect(2) = 2e-34
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +1

Query: 271  LISTLDAKVLGFEHVKELYLHDLDFAESF 357
            L++ L+ KV G E +KELY  DLDF+E +
Sbjct: 1135 LLNQLEVKVTGIESIKELYSADLDFSEPY 1163


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  136 bits (342), Expect(2) = 2e-34
 Identities = 59/83 (71%), Positives = 73/83 (87%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL GA LNY  YDKELYALV AL+TWQHYLWPKEF+I++ H++LKYLKGQ KLN++HA W
Sbjct: 13  KLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKW 72

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE FPY+++YK+GK N+VAD
Sbjct: 73  VEFIETFPYVVKYKKGKENIVAD 95



 Score = 35.4 bits (80), Expect(2) = 2e-34
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +1

Query: 271 LISTLDAKVLGFEHVKELYLHDLDFAESF 357
           L++ L+ KV G E +KELY  DLDF+E +
Sbjct: 103 LLNQLEVKVTGIESIKELYSADLDFSEPY 131


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score =  136 bits (342), Expect(2) = 4e-34
 Identities = 59/83 (71%), Positives = 73/83 (87%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL GA LNY  YDKELYALV AL+TWQHYLWPKEF+I++ H++LKYLKGQ KLN++HA W
Sbjct: 13  KLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKW 72

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE FPY+++YK+GK N+VAD
Sbjct: 73  VEFIETFPYVVKYKKGKENIVAD 95



 Score = 34.3 bits (77), Expect(2) = 4e-34
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +1

Query: 271 LISTLDAKVLGFEHVKELYLHDLDFAESF 357
           L++ L+ KV G E +KELY  DLDF+E +
Sbjct: 103 LLNQLEVKVPGIESIKELYPADLDFSEPY 131


>gb|AAP43919.1| integrase [Gossypium hirsutum]
          Length = 334

 Score =  122 bits (306), Expect(2) = 7e-34
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL+GA LNY TYDKEL ALV AL+ WQHYL P EF+I+T H+SLK+LKGQ KL+K+HA W
Sbjct: 13  KLNGAQLNYSTYDKELLALVRALQVWQHYLLPNEFVIHTDHESLKWLKGQGKLSKRHARW 72

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE FPY+++YK G  NVVAD
Sbjct: 73  VEFIETFPYMIQYKIGNDNVVAD 95



 Score = 47.4 bits (111), Expect(2) = 7e-34
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 265 YTLISTLDAKVLGFEHVKELYLHDLDFAESF 357
           YTLI+TL+AKVLGFEH+KELY  D DF+  +
Sbjct: 101 YTLITTLNAKVLGFEHIKELYDDDTDFSHIY 131


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  131 bits (330), Expect(2) = 9e-34
 Identities = 56/83 (67%), Positives = 73/83 (87%)
 Frame = +2

Query: 5    KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
            KLSG +LNY TYDKELYALV  L+TWQHYLWPKEF+I++ H+SLK++K Q KLN++HA W
Sbjct: 1101 KLSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKW 1160

Query: 185  LEFIEMFPYILRYKQGKTNVVAD 253
            +EFIE FPY++++K+GK NV+AD
Sbjct: 1161 VEFIETFPYVIKHKKGKDNVIAD 1183



 Score = 37.7 bits (86), Expect(2) = 9e-34
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 265  YTLISTLDAKVLGFEHVKELYLHDLDFAE 351
            YT++S LD K+ G E +K+ Y+HD DF +
Sbjct: 1189 YTMLSQLDFKIFGLETIKDQYVHDADFKD 1217


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  130 bits (326), Expect(2) = 1e-33
 Identities = 54/83 (65%), Positives = 73/83 (87%)
 Frame = +2

Query: 5    KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
            KLSG+ LNY TYDKELYALV  L+TWQHYLWPKEF+I++ H+SLK+++ Q KLN++HA W
Sbjct: 1045 KLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKW 1104

Query: 185  LEFIEMFPYILRYKQGKTNVVAD 253
            +EFIE FPY++++K+GK N++AD
Sbjct: 1105 VEFIESFPYVIKHKKGKENIIAD 1127



 Score = 38.5 bits (88), Expect(2) = 1e-33
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +1

Query: 265  YTLISTLDAKVLGFEHVKELYLHDLDFAESFVA*KKG 375
            YTL++ LD K+ G E +K+ Y+HD DF +  +  K G
Sbjct: 1133 YTLLNQLDYKIFGLETIKDQYVHDADFKDVLLHCKDG 1169


>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
           zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
           E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
           putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score =  146 bits (369), Expect = 2e-33
 Identities = 65/83 (78%), Positives = 76/83 (91%)
 Frame = +2

Query: 5   KLSGAALNYPTYDKELYALVWALKTWQHYLWPKEFIIYTYHKSLKYLKGQQKLNKQHACW 184
           KL GA LNYPTYDKELYALV AL+TWQHYLWPKEF+I+T H+SLK+LKGQQKLNK+HA W
Sbjct: 653 KLGGATLNYPTYDKELYALVRALQTWQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARW 712

Query: 185 LEFIEMFPYILRYKQGKTNVVAD 253
           +EFIE FPY+++YK+GK NVVAD
Sbjct: 713 VEFIETFPYVIKYKKGKDNVVAD 735