BLASTX nr result

ID: Rehmannia26_contig00029558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029558
         (515 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77546.1| hypothetical protein VITISV_025214 [Vitis vinifera]    56   4e-06
ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    56   6e-06
emb|CBI18698.3| unnamed protein product [Vitis vinifera]               56   6e-06

>emb|CAN77546.1| hypothetical protein VITISV_025214 [Vitis vinifera]
          Length = 1043

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/128 (34%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
 Frame = -2

Query: 358 GSSNHNIDLRSTQCSKSLSVSSSE---GYWKNEAQMVNGKETRSKSFRSSENDQ------ 206
           G + H+ D    + S  LS S S+      +NE Q+V  KE  S S   S++        
Sbjct: 279 GGARHS-DASKHRSSPLLSRSGSDFLASDSRNEPQVVKXKEVSSVSSTVSDHSSPAPEGH 337

Query: 205 KKCTKMGSTHTSLSEIEGVQVLSQPTSKILKTSVRKFVQHFRVPKQSKSHRVDTWKDSAG 26
                  + HTS +    V  L Q     L+TSVRK  QHFR  KQSK   +      AG
Sbjct: 338 SASVAKSAKHTSPNXHSEVAGLQQNAYNGLRTSVRKVAQHFRASKQSKPQLLGIGXGIAG 397

Query: 25  NYNHKIIF 2
            YNHK++F
Sbjct: 398 KYNHKMLF 405


>ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Vitis
           vinifera]
          Length = 942

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/128 (34%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
 Frame = -2

Query: 358 GSSNHNIDLRSTQCSKSLSVSSSE---GYWKNEAQMVNGKETRSKSFRSSENDQ------ 206
           G + H+ D    + S  LS S S+      +NE Q+V  KE  S S   S++        
Sbjct: 252 GGARHS-DASKHRSSPLLSRSGSDFLASDSRNEPQVVKRKEVSSVSSTVSDHSSPAPEGH 310

Query: 205 KKCTKMGSTHTSLSEIEGVQVLSQPTSKILKTSVRKFVQHFRVPKQSKSHRVDTWKDSAG 26
                  + HTS +    V  L Q     L+TSVRK  QHFR  KQSK   +      AG
Sbjct: 311 SASVAKSAKHTSPNMHSEVAGLQQNAYNGLRTSVRKVAQHFRASKQSKPQLLGIGSGIAG 370

Query: 25  NYNHKIIF 2
            YNHK++F
Sbjct: 371 KYNHKMLF 378


>emb|CBI18698.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/128 (34%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
 Frame = -2

Query: 358 GSSNHNIDLRSTQCSKSLSVSSSE---GYWKNEAQMVNGKETRSKSFRSSENDQ------ 206
           G + H+ D    + S  LS S S+      +NE Q+V  KE  S S   S++        
Sbjct: 213 GGARHS-DASKHRSSPLLSRSGSDFLASDSRNEPQVVKRKEVSSVSSTVSDHSSPAPEGH 271

Query: 205 KKCTKMGSTHTSLSEIEGVQVLSQPTSKILKTSVRKFVQHFRVPKQSKSHRVDTWKDSAG 26
                  + HTS +    V  L Q     L+TSVRK  QHFR  KQSK   +      AG
Sbjct: 272 SASVAKSAKHTSPNMHSEVAGLQQNAYNGLRTSVRKVAQHFRASKQSKPQLLGIGSGIAG 331

Query: 25  NYNHKIIF 2
            YNHK++F
Sbjct: 332 KYNHKMLF 339


Top