BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029495
         (1101 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ25313.1| hypothetical protein PRUPE_ppa015679mg [Prunus pe...   268   2e-69
ref|XP_004247930.1| PREDICTED: uncharacterized protein LOC101262...   267   6e-69
ref|XP_006354470.1| PREDICTED: dentin sialophosphoprotein-like [...   266   1e-68
ref|XP_004297831.1| PREDICTED: uncharacterized protein LOC101296...   265   3e-68
ref|XP_002314482.2| hypothetical protein POPTR_0010s08070g [Popu...   257   7e-66
ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis ly...   235   3e-59
ref|NP_188979.2| RNA recognition motif-containing protein [Arabi...   230   9e-58
ref|XP_006297030.1| hypothetical protein CARUB_v10013033mg [Caps...   222   2e-55
ref|XP_006406035.1| hypothetical protein EUTSA_v10020149mg [Eutr...   218   3e-54
ref|NP_001118682.1| RNA recognition motif-containing protein [Ar...   216   1e-53
ref|XP_006857341.1| hypothetical protein AMTR_s00067p00095130 [A...   189   1e-45
gb|ABF59161.1| unknown protein [Arabidopsis thaliana]                 155   4e-35
gb|EOY06088.1| RNA-binding (RRM/RBD/RNP motifs) family protein [...   137   3e-30
ref|XP_002988242.1| hypothetical protein SELMODRAFT_447288 [Sela...   108   3e-21
ref|XP_002991376.1| hypothetical protein SELMODRAFT_429718 [Sela...   108   5e-21
ref|XP_001778539.1| predicted protein [Physcomitrella patens] gi...   100   1e-18
gb|ADE76534.1| unknown [Picea sitchensis]                              85   6e-14
ref|XP_001769584.1| predicted protein [Physcomitrella patens] gi...    80   1e-12
ref|XP_002978664.1| hypothetical protein SELMODRAFT_418465 [Sela...    76   2e-11
ref|XP_002984597.1| hypothetical protein SELMODRAFT_423782 [Sela...    76   2e-11

>gb|EMJ25313.1| hypothetical protein PRUPE_ppa015679mg [Prunus persica]
          Length = 835

 Score =  268 bits (686), Expect = 2e-69
 Identities = 146/302 (48%), Positives = 203/302 (67%), Gaps = 4/302 (1%)
 Frame = -3

Query: 1099 NNKDQRQLKVTHFPRKGSEENKVVVKFLRSSVPENHILQHFRSCGEILEIEFPNAKEHL- 923
            + +D  ++ +T   ++GS E+KV+V+FL  +V ++ ++     CGEI++I+  +  E   
Sbjct: 513  SKEDLNKIPITFSQKEGSTESKVLVRFLHKNVKDDAVVNALNDCGEIVKIQLLSVSEGSN 572

Query: 922  FKTAYIFFKTREGFDKALKKSGSILNNSVMTVESATSTENV--KIPIPSLIGDHDIPAAL 749
            F+ A++ FKT     +AL+K+  I+ NS + V  ATS E+V  K+ IP++IGD ++P AL
Sbjct: 573  FRDAWVHFKTSNESQRALRKTDLIIGNSEVVVV-ATSLEDVLNKVSIPNVIGDSELPVAL 631

Query: 748  VKNPTRTIKIEHLTLEISSCHIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALA 569
            +KNPTRT+ I+HLT +IS  H++ ALAFC S IS +FLGSS S+A+VEFETE  KE A+A
Sbjct: 632  IKNPTRTVMIKHLTHDISLHHLKGALAFCGSGISSFFLGSSSSVAFVEFETEDAKETAIA 691

Query: 568  KQSINVLGRHLLLLRIDSPRTTVVRISNI-HSLELSNIHSICRSLGGVRLTNLRNLDTLD 392
              SINV G+ L +LRID PRTTVVRISN   ++      +IC S G V+    R  D +D
Sbjct: 692  ACSINVEGKQLSILRIDVPRTTVVRISNFGGTVSKKRFQTICNSHGQVKQRKDRGRDIVD 751

Query: 391  VHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPAPVFPPDVLYALWHQPEERKRLKATAQA 212
            VHF  AEWPNML ILN LNG EV+G R  A PAPVFPP+VL  LW +P+ER  + +  + 
Sbjct: 752  VHFKLAEWPNMLTILNSLNGMEVDGNRWLARPAPVFPPEVLQVLWSRPDERIHVISVLRR 811

Query: 211  LL 206
            LL
Sbjct: 812  LL 813


>ref|XP_004247930.1| PREDICTED: uncharacterized protein LOC101262563 [Solanum
            lycopersicum]
          Length = 851

 Score =  267 bits (682), Expect = 6e-69
 Identities = 136/286 (47%), Positives = 194/286 (67%)
 Frame = -3

Query: 1054 KGSEENKVVVKFLRSSVPENHILQHFRSCGEILEIEFPNAKEHLFKTAYIFFKTREGFDK 875
            K S+ENK+ +KF+     E+ +   F+SCG I ++ FP+ K   +K A+I+F++++G  K
Sbjct: 544  KLSDENKLTIKFVNVKATEDDVRDCFKSCGAITKVVFPSVKSTNYKVAHIYFESKKGRQK 603

Query: 874  ALKKSGSILNNSVMTVESATSTENVKIPIPSLIGDHDIPAALVKNPTRTIKIEHLTLEIS 695
            AL+ S  ++ N V+   +       ++ IP LIG  ++P +LVK+P+RT+ I+ L   +S
Sbjct: 604  ALEWSDVVIKNIVVVEATFPPKGRERMCIPDLIGYPEVPTSLVKHPSRTVMIKELKHNVS 663

Query: 694  SCHIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQSINVLGRHLLLLRIDS 515
               IEEALAFC SNI+G + GSS S+AYVEFET  GKE A+AK S+ +LG  L +LRID+
Sbjct: 664  FHDIEEALAFCRSNITGIYFGSSSSVAYVEFETVEGKEIAIAKHSLTMLGETLSILRIDA 723

Query: 514  PRTTVVRISNIHSLELSNIHSICRSLGGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLN 335
            PRTT+VRISNI     + + S C++LG  R    + L  +DVHF  AEWP ML+I+NRLN
Sbjct: 724  PRTTIVRISNIAIPSRAKVISFCKNLGQTRHFFKKALGIMDVHFKLAEWPRMLEIINRLN 783

Query: 334  GFEVEGRRLQAEPAPVFPPDVLYALWHQPEERKRLKATAQALLHKI 197
            G EV+G++L A+PAP++PPDVL  LW QPE RK LK T  ++L K+
Sbjct: 784  GTEVDGQQLVAKPAPIYPPDVLKVLWSQPEGRKHLKTTFNSMLLKV 829


>ref|XP_006354470.1| PREDICTED: dentin sialophosphoprotein-like [Solanum tuberosum]
          Length = 928

 Score =  266 bits (680), Expect = 1e-68
 Identities = 134/284 (47%), Positives = 188/284 (66%)
 Frame = -3

Query: 1048 SEENKVVVKFLRSSVPENHILQHFRSCGEILEIEFPNAKEHLFKTAYIFFKTREGFDKAL 869
            S+ENK+ +KF+     E  +   F+ CG I ++ FP+     +K A+I+F++++G  KAL
Sbjct: 623  SDENKMTIKFVNVKATEQDVCDGFKGCGAITKVVFPSVISTNYKVAHIYFESKKGKQKAL 682

Query: 868  KKSGSILNNSVMTVESATSTENVKIPIPSLIGDHDIPAALVKNPTRTIKIEHLTLEISSC 689
            K S +++ N V+   +       ++ IP LIG  ++P +LVK+P+RT+ I+ L   +S  
Sbjct: 683  KWSDTVIRNVVVVEATFPPKGRERMCIPDLIGHPEVPTSLVKHPSRTVMIKELKHNVSFH 742

Query: 688  HIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQSINVLGRHLLLLRIDSPR 509
             IEE LAFC SNI+G F GSS S+AYVEFET  GKE A+AK S+ +LG  L +LRID+PR
Sbjct: 743  DIEEVLAFCGSNITGIFFGSSSSVAYVEFETVEGKEIAIAKHSLIMLGETLSILRIDAPR 802

Query: 508  TTVVRISNIHSLELSNIHSICRSLGGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLNGF 329
            TT+VRISNI     + + S C+ LG  R    +    +DVHF  AEWP ML+I+NRLNG 
Sbjct: 803  TTIVRISNIPVTSRAKVISFCKKLGQTRYFFTKAFGVMDVHFKFAEWPRMLEIINRLNGI 862

Query: 328  EVEGRRLQAEPAPVFPPDVLYALWHQPEERKRLKATAQALLHKI 197
            EV+G++L A+PAP++PPDVL  LW QPE RK LK T  +LL K+
Sbjct: 863  EVDGQQLVAKPAPIYPPDVLKVLWSQPEGRKHLKTTFNSLLQKV 906


>ref|XP_004297831.1| PREDICTED: uncharacterized protein LOC101296092 [Fragaria vesca
            subsp. vesca]
          Length = 736

 Score =  265 bits (676), Expect = 3e-68
 Identities = 155/321 (48%), Positives = 209/321 (65%), Gaps = 11/321 (3%)
 Frame = -3

Query: 1087 QRQLKV--THFPRKGSEENKVVVKFLRSSVPENHILQHFRSCGEILEIEF-PNAKEHLFK 917
            Q  L++  T   +K S E+KV+V+FL   V E+ I + F  CG I  I+  P  +  +F+
Sbjct: 410  QEDLRIPGTSCQKKVSTESKVMVRFLHKFVQESSIYKAFDDCGCITRIQLLPLIEGSIFR 469

Query: 916  TAYIFFKTREGFDKALKKSGSILNNSVMTVESATSTENV--KIPIPSLIGDHDIPAALVK 743
              Y+ FKT EG  KAL+KSG +     + V+ A S E+V  KI IP+LIGD ++P  LVK
Sbjct: 470  AGYVHFKTAEGSHKALRKSGIVSEGHTVVVD-ANSLEDVPNKIAIPNLIGDPEVPLMLVK 528

Query: 742  NPTRTIKIEHLTLEISSCHIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQ 563
            +PTRT+ I+ LT +IS   ++EALAFC S IS  FLGSS S+AYVEFETE  KERA+A  
Sbjct: 529  SPTRTVMIKQLTHDISLHQLKEALAFCGSGISSVFLGSSSSVAYVEFETEDAKERAIAAY 588

Query: 562  SINVLGRHLLLLRIDSPRTTVVRISNI------HSLELSNIHSICRSLGGVRLTNLRNLD 401
            SINV  + LL+LRID PRTTV+R++++      ++  LS+I S+C S GGV    LRN+ 
Sbjct: 589  SINVQEKQLLILRIDVPRTTVIRMTSVDDALFSNTKVLSDIVSVCSSSGGVGKVKLRNMG 648

Query: 400  TLDVHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPAPVFPPDVLYALWHQPEERKRLKAT 221
             LDV+F    WP ML ILNRLNG EV G R+ A+PA VFPP VL  LW +P+ER  +K  
Sbjct: 649  MLDVYFNLDHWPKMLSILNRLNGMEVHGHRVIAQPATVFPPAVLQVLWSKPDERIHVK-- 706

Query: 220  AQALLHKIRENTLDTCELASL 158
              ++L ++ +NT    EL++L
Sbjct: 707  --SVLRRLLQNTDLPVELSNL 725


>ref|XP_002314482.2| hypothetical protein POPTR_0010s08070g [Populus trichocarpa]
            gi|550329344|gb|EEF00653.2| hypothetical protein
            POPTR_0010s08070g [Populus trichocarpa]
          Length = 696

 Score =  257 bits (656), Expect = 7e-66
 Identities = 148/322 (45%), Positives = 206/322 (63%), Gaps = 1/322 (0%)
 Frame = -3

Query: 1099 NNKDQRQLKVTHFPRKGSEENKVVVKFLRSSVPENHILQHFRSCGEILEIE-FPNAKEHL 923
            + KD  Q  +T     G  ENK++++FL   V +  I+  FR+CG I +IE   + K   
Sbjct: 380  SEKDSNQTPLTSLA-DGDTENKLLLRFLHKDVGDGDIISCFRNCGPISKIEKVSSVKGSN 438

Query: 922  FKTAYIFFKTREGFDKALKKSGSILNNSVMTVESATSTENVKIPIPSLIGDHDIPAALVK 743
               A++ F+TR+G  KAL+K   ++ NS   +    S    +I IP+LIGD DI  ALVK
Sbjct: 439  LFDAFLHFETRQGLHKALEKPEVLIKNSNAFIHDTAS----RISIPNLIGDIDISVALVK 494

Query: 742  NPTRTIKIEHLTLEISSCHIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQ 563
            +PTRT+KI+ LT +ISS  ++EAL+FC S I+  FLG+S S AYVEFE+E  KERALAK 
Sbjct: 495  HPTRTVKIKQLTDDISSHQLKEALSFCRSGIN-VFLGASSSNAYVEFESEDAKERALAKH 553

Query: 562  SINVLGRHLLLLRIDSPRTTVVRISNIHSLELSNIHSICRSLGGVRLTNLRNLDTLDVHF 383
             + V G+ L + R+D+PRTTVVRI NI+    SN+ +IC+S G +    LR+ +  DV+F
Sbjct: 554  FLQVSGKQLSIFRVDAPRTTVVRILNINPQCRSNVLTICKSFGKLWRMKLRHENIADVYF 613

Query: 382  GPAEWPNMLKILNRLNGFEVEGRRLQAEPAPVFPPDVLYALWHQPEERKRLKATAQALLH 203
               EWPNML ILN LNG E +G R  A+PA +FPP +L ALW+ P+ER+ + ++ Q LL 
Sbjct: 614  KIDEWPNMLNILNSLNGLEADGSRWVAQPASIFPPIILQALWNHPDERRHVISSMQCLLK 673

Query: 202  KIRENTLDTCELASLQHVFEDY 137
            K+ E+ +DT EL +L   F  Y
Sbjct: 674  KL-EHPMDTAELNNLAARFCGY 694


>ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329267|gb|EFH59686.1| nucleic acid binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 785

 Score =  235 bits (599), Expect = 3e-59
 Identities = 131/298 (43%), Positives = 189/298 (63%), Gaps = 4/298 (1%)
 Frame = -3

Query: 1039 NKVVVKFLRSSVPENHILQHFRSCGEILEI-EFPNAKEHLFKTAYIFFKTREGFDKALKK 863
            NKV+++FL+ S  + HI++ F   G +L + E P+ +  ++K A + F+T     KAL+K
Sbjct: 484  NKVLLRFLQESCQKKHIVEVFSQFGAVLHVQEIPSFEGCIYKDALLTFETNTAVKKALEK 543

Query: 862  SGSILNNSVMTVESATSTENV--KIPIPSLIGDHDIPAALVKNPTRTIKIEHLTLEISSC 689
                + N+   VE ATS E++  +I IP LIGD D+P ALVK P+RT+KI  LT + SS 
Sbjct: 544  GRVTVMNNNAVVE-ATSQEDMVERICIPDLIGDPDVPVALVKEPSRTVKIHPLTHDFSSN 602

Query: 688  HIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQSINVLGRHLLLLRIDSPR 509
             I+EAL FC SNIS + LGSS + A+VEFETE GKERALA+ SI++    L + RID PR
Sbjct: 603  QIKEALKFCRSNISKFILGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPR 662

Query: 508  TTVVRISNIHSLELSNIHSICRSLGGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLNGF 329
            TTV RISN+    + ++ ++C   G ++   +R    +DV F  +EWPNML ILN LNG 
Sbjct: 663  TTVARISNLSKSAMKDVRALCVPYGQIKQVYIRGNGVVDVLFDVSEWPNMLNILNSLNGM 722

Query: 328  EVEGRRLQAEPA-PVFPPDVLYALWHQPEERKRLKATAQALLHKIRENTLDTCELASL 158
             ++G++L   PA  V PP++L  LW  P+E++ +K+  Q L+ +I E  LD     +L
Sbjct: 723  GIDGKKLVVRPATTVIPPEILRVLWKDPQEKRYVKSVIQNLVREI-EQPLDATRCHTL 779


>ref|NP_188979.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|11994322|dbj|BAB02281.1| unnamed protein product
            [Arabidopsis thaliana] gi|332643236|gb|AEE76757.1| RNA
            recognition motif-containing protein [Arabidopsis
            thaliana]
          Length = 811

 Score =  230 bits (586), Expect = 9e-58
 Identities = 133/299 (44%), Positives = 186/299 (62%), Gaps = 5/299 (1%)
 Frame = -3

Query: 1039 NKVVVKFLRSSVPENHILQHFRS-CGEILEI-EFPNAKEHLFKTAYIFFKTREGFDKALK 866
            NKV+++FL  S  + HI++ F S  G +L + E P+ +  ++K A + F+T     KALK
Sbjct: 509  NKVLLRFLPESSMKKHIVKAFSSQFGAVLHVQEIPSIEGCIYKDALLTFETNTAVKKALK 568

Query: 865  KSGSILNNSVMTVESATSTENV--KIPIPSLIGDHDIPAALVKNPTRTIKIEHLTLEISS 692
            K G +   +  TV  ATS E++  +I IP LIGD D+P ALVK P RT+KI  LT + SS
Sbjct: 569  K-GHVTVMNYNTVVEATSQEDMVERICIPDLIGDPDVPVALVKEPARTVKIHPLTHDFSS 627

Query: 691  CHIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQSINVLGRHLLLLRIDSP 512
              I+EAL FC SNIS + LGSS + A+VEFETE GKERALA+ SI++    L + RID P
Sbjct: 628  NQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIP 687

Query: 511  RTTVVRISNIHSLELSNIHSICRSLGGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLNG 332
            RT V RISN+    + ++ ++C   G +R   +R     DV F  +EWPNML ILN +NG
Sbjct: 688  RTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNG 747

Query: 331  FEVEGRRLQAEPA-PVFPPDVLYALWHQPEERKRLKATAQALLHKIRENTLDTCELASL 158
             E++G++L   PA  V PP++L  LW  P E++ +K+  Q L+ +I E  LD     +L
Sbjct: 748  MEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREI-EQPLDATRCHTL 805


>ref|XP_006297030.1| hypothetical protein CARUB_v10013033mg [Capsella rubella]
            gi|482565739|gb|EOA29928.1| hypothetical protein
            CARUB_v10013033mg [Capsella rubella]
          Length = 764

 Score =  222 bits (566), Expect = 2e-55
 Identities = 126/324 (38%), Positives = 191/324 (58%), Gaps = 5/324 (1%)
 Frame = -3

Query: 1090 DQRQLKVTHFPRKGSEE--NKVVVKFLRSSVPENHILQHFRSCGEILEI-EFPNAKEHLF 920
            D + +K + F     E   NKV+++FL+ S  +N I++ F   G +L++ E P+ +  ++
Sbjct: 441  DPKVIKKSLFALSAGEHSPNKVLLRFLQESFNKNDIVEVFSGFGTVLDVQEIPSLEGCIY 500

Query: 919  KTAYIFFKTREGFDKALKKSGSILNNSVMTVESATSTENVK-IPIPSLIGDHDIPAALVK 743
            K A + F+T+     ALKK   ++ N  + VE+A+  + V+ I IP LIGD D+P ALVK
Sbjct: 501  KDALLTFETKTAVKDALKKVSVMVKNYSVCVEAASQKDMVETICIPDLIGDPDVPIALVK 560

Query: 742  NPTRTIKIEHLTLEISSCHIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQ 563
             P RT KI  +T + SS  I+EAL FC SNIS + LGS+ + A+VEFETE GKERALA  
Sbjct: 561  EPARTAKIHPMTHDFSSNQIKEALRFCRSNISKFILGSAGTDAFVEFETEDGKERALAGH 620

Query: 562  SINVLGRHLLLLRIDSPRTTVVRISNIHSLELSNIHSICRSLGGVRLTNLRNLDTLDVHF 383
            S+++    L + RID PRTTV R SN     + ++ ++C   G ++    R     DV F
Sbjct: 621  SVSICNTQLFISRIDIPRTTVARFSNFSGSAMGDVRALCVPYGKIKQVYHRGKGIADVRF 680

Query: 382  GPAEWPNMLKILNRLNGFEVEGRRLQAEPA-PVFPPDVLYALWHQPEERKRLKATAQALL 206
              +EWPNML ILN LNG EV+G +L    A  V PP++L  LW  P+ ++ +K+  + L+
Sbjct: 681  DVSEWPNMLSILNSLNGMEVDGNKLVVRAATAVIPPEILSLLWRDPQGKRYVKSVIRNLV 740

Query: 205  HKIRENTLDTCELASLQHVFEDYI 134
             +I +    T     +Q + + ++
Sbjct: 741  REIEQPIDATSYHTLMQDLLDSFM 764


>ref|XP_006406035.1| hypothetical protein EUTSA_v10020149mg [Eutrema salsugineum]
            gi|557107181|gb|ESQ47488.1| hypothetical protein
            EUTSA_v10020149mg [Eutrema salsugineum]
          Length = 730

 Score =  218 bits (555), Expect = 3e-54
 Identities = 126/297 (42%), Positives = 179/297 (60%), Gaps = 3/297 (1%)
 Frame = -3

Query: 1039 NKVVVKFLRSSVPENHILQHFRSCGEILEI-EFPNAKEHLFKTAYIFFKTREGFDKALKK 863
            NKV ++FL     +  I++ F   G +L+  E P+     +K A + F+T     KALKK
Sbjct: 432  NKVCLRFL-PRFDKEEIVKRFSEFGAVLDFQEIPSFDGCYYKDAVLTFETHSAVKKALKK 490

Query: 862  SGSILNNSVMTVESATSTENV-KIPIPSLIGDHDIPAALVKNPTRTIKIEHLTLEISSCH 686
            +  ++ N  + VE+ +  +NV KI IP LIGD D+P AL+K PTRT+KI  L   ISS  
Sbjct: 491  AVVMVKNYSVIVEATSQEDNVEKICIPDLIGDPDVPIALLKEPTRTVKIHPLAHGISSNQ 550

Query: 685  IEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQSINVLGRHLLLLRIDSPRT 506
            I+EAL FC S+IS + LGSS + A+VEFETE GKERALA+ SI++  + L + RID PRT
Sbjct: 551  IKEALRFCRSDISKFILGSSKTAAFVEFETEDGKERALAEHSISIFNKQLFISRIDIPRT 610

Query: 505  TVVRISNIHSLELSNIHSICRSLGGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLNGFE 326
            TV RIS+     +S+I  +C   G ++    R     DVHF  +EWPNM  ILN +NG E
Sbjct: 611  TVARISHFSKPCMSDIRKLCAPYGKIKQLLFRGDGIADVHFDVSEWPNMHTILNSMNGME 670

Query: 325  VEGRRLQAEPA-PVFPPDVLYALWHQPEERKRLKATAQALLHKIRENTLDTCELASL 158
            ++G +    PA  V P ++L  LW  P+ ++ +K   Q L+ +I E  LD   +A++
Sbjct: 671  IDGMKWVVRPATTVIPHEILKVLWEDPQGKRYVKGLIQNLVREI-EQPLDAAPIAAM 726


>ref|NP_001118682.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|332643237|gb|AEE76758.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
          Length = 771

 Score =  216 bits (551), Expect = 1e-53
 Identities = 123/274 (44%), Positives = 170/274 (62%), Gaps = 4/274 (1%)
 Frame = -3

Query: 967  GEILEI-EFPNAKEHLFKTAYIFFKTREGFDKALKKSGSILNNSVMTVESATSTENV--K 797
            G +L + E P+ +  ++K A + F+T     KALKK G +   +  TV  ATS E++  +
Sbjct: 494  GAVLHVQEIPSIEGCIYKDALLTFETNTAVKKALKK-GHVTVMNYNTVVEATSQEDMVER 552

Query: 796  IPIPSLIGDHDIPAALVKNPTRTIKIEHLTLEISSCHIEEALAFCESNISGYFLGSSHSI 617
            I IP LIGD D+P ALVK P RT+KI  LT + SS  I+EAL FC SNIS + LGSS + 
Sbjct: 553  ICIPDLIGDPDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTD 612

Query: 616  AYVEFETEIGKERALAKQSINVLGRHLLLLRIDSPRTTVVRISNIHSLELSNIHSICRSL 437
            A+VEFETE GKERALA+ SI++    L + RID PRT V RISN+    + ++ ++C   
Sbjct: 613  AFVEFETEDGKERALAEHSISICNTQLFISRIDIPRTIVARISNLSKSAMRDVRALCVPY 672

Query: 436  GGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPA-PVFPPDVLYAL 260
            G +R   +R     DV F  +EWPNML ILN +NG E++G++L   PA  V PP++L  L
Sbjct: 673  GQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNGMEIDGKKLVVRPATTVIPPEILRVL 732

Query: 259  WHQPEERKRLKATAQALLHKIRENTLDTCELASL 158
            W  P E++ +K+  Q L+ +I E  LD     +L
Sbjct: 733  WKDPREKRYVKSVIQNLVREI-EQPLDATRCHTL 765


>ref|XP_006857341.1| hypothetical protein AMTR_s00067p00095130 [Amborella trichopoda]
            gi|548861434|gb|ERN18808.1| hypothetical protein
            AMTR_s00067p00095130 [Amborella trichopoda]
          Length = 773

 Score =  189 bits (481), Expect = 1e-45
 Identities = 122/307 (39%), Positives = 174/307 (56%), Gaps = 5/307 (1%)
 Frame = -3

Query: 1063 FPRKGSEENKVVVKFLRSSVPENHILQHFRSCGEILEI-EFPNAKEHL-FKTAYIFFKTR 890
            F ++   +N + VKFL  S  +  I + F  CGEI E+   P+ K    F  AY+ F   
Sbjct: 460  FSKRPIGQNTLFVKFLPKSATDVDIRKAFGGCGEIEELCIIPSLKATARFNNAYVSFLRG 519

Query: 889  EGFDKALKKSGSILNNSVMTVESATSTENVK--IPIPSLIGDHDIPAALVKNPTRTIKIE 716
            EG  +AL+KS  ++N + + VE+ +    +   + I +LIGD D P  L++NP RTI + 
Sbjct: 520  EGLQRALEKSNLVINGADVVVEADSPLLKITNMVSISNLIGDPDAPLPLLENPVRTIMVR 579

Query: 715  HLTLEISSCHIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQSINVLGRHL 536
             L + I S  +  +L+   S IS + +GSS SI Y+EFETE  KE+ALA  +I++ G+ +
Sbjct: 580  GLPVGIGSHQLSFSLSNFGS-ISRFIMGSSLSIGYIEFETEDAKEKALAASTISLSGKQI 638

Query: 535  LLLRIDSPRTTVVRISNI-HSLELSNIHSICRSLGGVRLTNLRNLDTLDVHFGPAEWPNM 359
             +LRID+PRT+VVRISNI    +   I S C + G V     R+ DT+DVHF  +E  NM
Sbjct: 639  QILRIDAPRTSVVRISNIGRETKQIKILSTCETYGAVNRVVSRDGDTVDVHFMLSELGNM 698

Query: 358  LKILNRLNGFEVEGRRLQAEPAPVFPPDVLYALWHQPEERKRLKATAQALLHKIRENTLD 179
            L+ILN LNG  V   +  A PA VFPP +L +LW   E R+ +    Q L  K    +  
Sbjct: 699  LQILNHLNGMVVNQCQWWARPATVFPPQILQSLWKSTEGRQYVLTVVQNLCRKTCPGSTV 758

Query: 178  TCELASL 158
              E+A L
Sbjct: 759  HAEMAGL 765


>gb|ABF59161.1| unknown protein [Arabidopsis thaliana]
          Length = 226

 Score =  155 bits (391), Expect = 4e-35
 Identities = 82/180 (45%), Positives = 113/180 (62%), Gaps = 1/180 (0%)
 Frame = -3

Query: 694 SCHIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKERALAKQSINVLGRHLLLLRIDS 515
           S  I+EAL FC SNIS + LGSS + A+VEFETE GKERALA+ SI++    L + RID 
Sbjct: 42  SNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDI 101

Query: 514 PRTTVVRISNIHSLELSNIHSICRSLGGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLN 335
           PRT V RISN+    + ++ ++C   G +R   +R     DV F  +EWPNML ILN +N
Sbjct: 102 PRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMN 161

Query: 334 GFEVEGRRLQAEPA-PVFPPDVLYALWHQPEERKRLKATAQALLHKIRENTLDTCELASL 158
           G E++G++L   PA  V PP++L  LW  P E++ +K+  Q L+ +I E  LD     +L
Sbjct: 162 GMEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREI-EQPLDATRCHTL 220


>gb|EOY06088.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Theobroma cacao]
          Length = 245

 Score =  137 bits (345), Expect(2) = 3e-30
 Identities = 72/161 (44%), Positives = 111/161 (68%), Gaps = 2/161 (1%)
 Frame = -3

Query: 1057 RKGSEENKVVVKFLRSSVPENHILQHFRSCGEILEIEFPN-AKEHLFKTAYIFFKTREGF 881
            ++GS+EN V+ +FL  ++ ++ IL  F  C  I+ +E  +  K+ +FK   + F+TREG+
Sbjct: 66   KEGSKENMVLDRFLTQNIEKHSILAAFCDCWPIVNVEEVSLTKQSMFKDFVVHFETREGY 125

Query: 880  DKALKKSGSILNNSVMTVESATSTE-NVKIPIPSLIGDHDIPAALVKNPTRTIKIEHLTL 704
               LKK+  ++ N+   VE+++S + +  I IP LIGD D P ALVKNPT+T+K++ L+ 
Sbjct: 126  QNTLKKTDLMVLNAEAFVEASSSEDMDDAISIPDLIGDPDAPVALVKNPTKTVKVKQLSE 185

Query: 703  EISSCHIEEALAFCESNISGYFLGSSHSIAYVEFETEIGKE 581
            +ISS  ++EALAFC+S IS ++LGS+ S+ YVEFETE  KE
Sbjct: 186  DISSQQLKEALAFCQSGISSFYLGSTSSVLYVEFETEDAKE 226



 Score = 22.3 bits (46), Expect(2) = 3e-30
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 584 RKGSCETIHQCFGKAFATAKN 522
           ++G+C T H C  K  A  ++
Sbjct: 225 KEGTCRTFHTCIRKGAANPQD 245


>ref|XP_002988242.1| hypothetical protein SELMODRAFT_447288 [Selaginella moellendorffii]
            gi|300143974|gb|EFJ10661.1| hypothetical protein
            SELMODRAFT_447288 [Selaginella moellendorffii]
          Length = 595

 Score =  108 bits (271), Expect = 3e-21
 Identities = 100/313 (31%), Positives = 142/313 (45%), Gaps = 22/313 (7%)
 Frame = -3

Query: 1096 NKDQRQLKVTHFPRKGSEENKVVVKFLRSSVPENHILQHFRSCGEILEIEFPNAKEHLFK 917
            N  Q  L+    PR G     + +KFL     E+ +   FRSCG+I  I+   ++    K
Sbjct: 254  NPAQPLLRSDLQPRHG-----LYIKFLAPQATESDVKAAFRSCGDIHRIQIVRSRNPGAK 308

Query: 916  TAYIF--FKTREGFDKALKKSGSILNNSVMTVESATSTENVKIPIPSLIGDHDIPAALVK 743
              Y F  F T E  + ALKK   I    V T  S       K        D D  A   K
Sbjct: 309  YIYGFVDFTTEEALNSALKKEIIIRGIKVQTEPSKNGAPKEKQQKQESDSDDDA-AKSNK 367

Query: 742  NPT-----RTIKIEHLTLEISSC-------------HIEEALAFCESNISGYFLGSS--H 623
            N T     +T+    L  E   C              I +AL      ++     SS  +
Sbjct: 368  NKTSLAVTKTMDDLALAPEKRRCTLALESIPHASLPQIIDALGQYGEVVNSQTKHSSGGN 427

Query: 622  SIAYVEFETEIGKERALAKQSINVLGRHLLLLRIDSPRTTVVRISNIHSLELSNIHSICR 443
            + AYVEF++EI K+ ALA   + + G+ L L R+D P TTVVR+SNI +     I S  +
Sbjct: 428  TTAYVEFKSEIEKDTALAASKVILGGKSLKLTRVDIPLTTVVRLSNIPADAREKIASSYK 487

Query: 442  SLGGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPAPVFPPDVLYA 263
            S G V   + R    +D+++  +E  NM KIL++LNG  V  R+L+A PAP+  P  +  
Sbjct: 488  SYGQVDKVDPRMDGVVDIYYSASEIKNMAKILDKLNGLHVSRRKLRAMPAPISYPKTMAE 547

Query: 262  LWHQPEERKRLKA 224
            L   P+  K L++
Sbjct: 548  LAGTPQGLKWLES 560


>ref|XP_002991376.1| hypothetical protein SELMODRAFT_429718 [Selaginella moellendorffii]
            gi|300140769|gb|EFJ07488.1| hypothetical protein
            SELMODRAFT_429718 [Selaginella moellendorffii]
          Length = 595

 Score =  108 bits (269), Expect = 5e-21
 Identities = 96/301 (31%), Positives = 138/301 (45%), Gaps = 22/301 (7%)
 Frame = -3

Query: 1060 PRKGSEENKVVVKFLRSSVPENHILQHFRSCGEILEIEFPNAKEHLFKTAYIF--FKTRE 887
            PR G     + +KFL     E+ +   FRSCG+I  I+   ++    K  Y F  F T E
Sbjct: 266  PRHG-----LYIKFLAPQATESDVKAAFRSCGDIHRIQIVRSRNPGAKYIYGFVDFTTEE 320

Query: 886  GFDKALKKSGSILNNSVMTVESATSTENVKIPIPSLIGDHDIPAALVKNPTRTIKIEHL- 710
              + ALKK   I    V T  S       K        D D  A   KN T     + + 
Sbjct: 321  ALNSALKKEIIIRGIKVQTETSKNGAPKEKQQKQESDSDDDA-AKSNKNKTSLAVTKTMD 379

Query: 709  -----------TLEISSC------HIEEALAFCESNISGYFLGSS--HSIAYVEFETEIG 587
                       TL + S        I +AL      ++     SS  ++ AYVEF++EI 
Sbjct: 380  DLALPPEKRRCTLALESIPHASLPQIIDALGQYGEVVNSQTKHSSGGNTTAYVEFKSEIE 439

Query: 586  KERALAKQSINVLGRHLLLLRIDSPRTTVVRISNIHSLELSNIHSICRSLGGVRLTNLRN 407
            K+ ALA   + + G+ L L R+D P TTVVR+SNI +     I S  +S G V   + R 
Sbjct: 440  KDTALAASKVILGGKSLKLTRVDIPLTTVVRLSNIPADAREKIASSYKSYGQVDKVDPRM 499

Query: 406  LDTLDVHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPAPVFPPDVLYALWHQPEERKRLK 227
               +D+++  +E  NM KIL++LNG  V  R+L+A PAP+  P  +  L   P+  K L+
Sbjct: 500  DGVVDIYYSASEIKNMAKILDKLNGLHVSRRKLRAMPAPISYPKTMAELAGTPQGLKWLE 559

Query: 226  A 224
            +
Sbjct: 560  S 560


>ref|XP_001778539.1| predicted protein [Physcomitrella patens] gi|162670137|gb|EDQ56712.1|
            predicted protein [Physcomitrella patens]
          Length = 666

 Score =  100 bits (249), Expect = 1e-18
 Identities = 87/316 (27%), Positives = 147/316 (46%), Gaps = 31/316 (9%)
 Frame = -3

Query: 1045 EENKVVVKFLRSSVPENHILQHFRSCGEILEIEFPNAKEHLFKT-AYIFFKTREGFDKAL 869
            + + + +++L        + + F  CGEI+  +    + H   T  ++ FKT E   KAL
Sbjct: 303  DRHGLFLRYLSPQATPADLKEAFSDCGEIIRAQAIKPRTHQKYTYGFVDFKTAEALQKAL 362

Query: 868  KKSGSILNNSVMTVESATSTENVKIP-------------IPSLIGDHDIPAALVKNPTRT 728
            +K    +    +  E ++ST   KIP               S + D+   + L  + ++ 
Sbjct: 363  EKDKVYIKGVRIRKEPSSSTP--KIPDRNGNVNPLTVDFAQSRVSDNSPGSFLGPSKSKG 420

Query: 727  IK-------IEHLTLEISSCHIEEALA-FCESNISGYFLGSSHSIAYVEFETEIGKERAL 572
            I+       +E + L I    ++EAL+ + E   S    G    IA VEF+ E  +++AL
Sbjct: 421  IRRTGYSVAVEDVPLHIPLTEVKEALSKYGEIAHSSRKEGHGGYIANVEFKGEDARKKAL 480

Query: 571  AKQSINVLGRHLLLLRIDSPRTTVVRISNIHSLE-LSNIHSICRSLGGVRLTNLRNLDTL 395
            + +S+ + G H  +LR+D  +T+VVR++N   ++    I + C   G V     R    +
Sbjct: 481  SAKSVQLNGMHYSILRVDPIKTSVVRLNNAGFVDNTEQIQATCELHGRVDKVISRCDGIV 540

Query: 394  DVHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPAPVFPPDVLYAL--------WHQPEER 239
            DV+F P+E  NM +IL+RLN  +VEG+  QA+P+    P    +L        W Q E  
Sbjct: 541  DVYFHPSELENMPRILSRLNEVKVEGQVWQAQPSSCMDPSSYLSLMRTRGGQEWLQQESE 600

Query: 238  KRLKATAQALLHKIRE 191
            + L     AL H + E
Sbjct: 601  RMLGRIESALKHLVVE 616


>gb|ADE76534.1| unknown [Picea sitchensis]
          Length = 179

 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
 Frame = -3

Query: 613 YVEFETEIGKERALAKQSINVLGRHLLLLRIDSPRTTVVRISNIHS-LELSNIHSICRSL 437
           Y+EF+T   KERALA + + V G+ L +   D P TT+ RI+N+ S    + +HS+C S 
Sbjct: 5   YIEFKTIEAKERALAARWVFVNGKQLSICWSDFPVTTIARITNLSSETTATTVHSVCMSY 64

Query: 436 GGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPAPVFP 281
           G V    +R   ++DVH+   E PNM KIL  LN   + G    A+PAP  P
Sbjct: 65  GNVESLQIRKDGSMDVHYSINELPNMPKILEMLNEIAINGSHWMAQPAPRLP 116


>ref|XP_001769584.1| predicted protein [Physcomitrella patens] gi|162679126|gb|EDQ65577.1|
            predicted protein [Physcomitrella patens]
          Length = 593

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 79/342 (23%), Positives = 143/342 (41%), Gaps = 38/342 (11%)
 Frame = -3

Query: 1045 EENKVVVKFLRSSVPENHILQHFRSCGEILEIEFPNAKEHLFKT-AYIFFKTREGFDKAL 869
            E + + V++L        + + F  CG+I+      A+ ++  T  ++ FKT E   KAL
Sbjct: 251  ERHGIFVRYLSCRATPKDLREAFADCGDIVRAYAIRARPNVKYTYGFVDFKTAEALQKAL 310

Query: 868  KKSGSILNNSVMTVESATSTENVK---------------IPIPSLIGDHDIPAALVKNPT 734
             K+   +  S +T E +T+T +                 +   +  G   +    V  P 
Sbjct: 311  AKTRVYIRGSRVTTEPSTTTPHHLSNKSWDDSQNSSAGGVESTTSQGTEKVTGTYVDAPN 370

Query: 733  --------RTIKIEHLTLEISSCHIEEALA---------FCESNISGYFLGSSHSIAYVE 605
                      + +  + + +    ++ AL+           + NI  Y        A +E
Sbjct: 371  VKAIRGSGYKVAVMGIPMNVPLSEVQSALSKYGEIVLSDMKQENIGTYS-------ANLE 423

Query: 604  FETEIGKERALAKQSINVLGRHLLLLRIDSPRTTVVRISNIH-SLELSNIHSICRSLGGV 428
            F+    ++ AL+ +S+ + G    + R++   T+VVR+SN+     L  I + C   G V
Sbjct: 424  FKAVDSRDDALSAKSVQLNGSQYPIFRVNPVNTSVVRLSNVGVEANLDQIGATCELFGRV 483

Query: 427  RLTNLRNLDTLDVHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPAPVFPPDVLYALWHQP 248
                 R   ++DV+F   E  NM +IL RLN   + GRR  A+P+P        AL    
Sbjct: 484  SEVVARCDFSVDVYFQSTELENMSRILARLNEVTMNGRRWHAQPSPCLGSGSYEALLKTR 543

Query: 247  EERKRLKATAQALLHKI----RENTLDTCELASLQHVFEDYI 134
            E ++ L+  ++ +L K+    +E  +D  +L  L  V   Y+
Sbjct: 544  EGQEWLQLESERMLSKVENALKELVVDVEDLQELVKVNRRYM 585


>ref|XP_002978664.1| hypothetical protein SELMODRAFT_418465 [Selaginella moellendorffii]
            gi|300153473|gb|EFJ20111.1| hypothetical protein
            SELMODRAFT_418465 [Selaginella moellendorffii]
          Length = 766

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
 Frame = -3

Query: 793  PIPSLIGDHDIPAALVKNPTRTIKIEHLTLEISSCHIEEALAFCESNISGYFLGSS-HSI 617
            PIP L GD   P  + K+   ++ +E+L    +   + +ALA      + Y      +S 
Sbjct: 536  PIPPL-GD---PQKMRKD--LSVCVENLPPTTNVTQLRDALAIHGEIYATYLKHRDMNSS 589

Query: 616  AYV-EFETEIGKERALAKQSINVLGRHLLLLRIDSPRTTVVRISNIH-SLELSNIHSICR 443
             YV E+ T+ GKE AL+   +++ G+ + + R D P+TTVVR+SNI  S   S   + C+
Sbjct: 590  TYVFEYLTDEGKESALSAHWVHINGQLVRISRADVPKTTVVRVSNISPSTPDSEFINACK 649

Query: 442  SLGGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPAP 290
            S G V     R     DV + PAE  NM+KIL+RLN   +   R  A+PAP
Sbjct: 650  SCGQVERVESRRDRVRDVFYHPAETRNMIKILDRLNEVTINQSRWHAKPAP 700


>ref|XP_002984597.1| hypothetical protein SELMODRAFT_423782 [Selaginella moellendorffii]
            gi|300147579|gb|EFJ14242.1| hypothetical protein
            SELMODRAFT_423782 [Selaginella moellendorffii]
          Length = 758

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
 Frame = -3

Query: 793  PIPSLIGDHDIPAALVKNPTRTIKIEHLTLEISSCHIEEALAFCESNISGYFLGSS-HSI 617
            PIP L GD   P  + K+   ++ +E+L    +   + +ALA      + Y      +S 
Sbjct: 536  PIPPL-GD---PQKMRKD--LSVCVENLPPTTNVTQLRDALAIHGEIYATYLKHRDMNSS 589

Query: 616  AYV-EFETEIGKERALAKQSINVLGRHLLLLRIDSPRTTVVRISNIH-SLELSNIHSICR 443
             YV E+ T+ GKE AL+   +++ G+ + + R D P+TTVVR+SNI  S   S   + C+
Sbjct: 590  TYVFEYLTDEGKESALSAHWVHINGQLVRISRADVPKTTVVRVSNISPSTPDSEFINACK 649

Query: 442  SLGGVRLTNLRNLDTLDVHFGPAEWPNMLKILNRLNGFEVEGRRLQAEPAP 290
            S G V     R     DV + PAE  NM+KIL+RLN   +   R  A+PAP
Sbjct: 650  SCGQVERVESRRDRVRDVFYHPAETRNMIKILDRLNEVTINQSRWHAKPAP 700