BLASTX nr result

ID: Rehmannia26_contig00029455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029455
         (315 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006382170.1| hypothetical protein POPTR_0006s29040g [Popu...    60   3e-07
ref|NP_196625.2| putative translation elongation factor 2EF1A / ...    55   7e-06
emb|CAB89379.1| putative protein [Arabidopsis thaliana]                55   7e-06
ref|NP_001190282.1| putative translation elongation factor 2EF1A...    55   7e-06

>ref|XP_006382170.1| hypothetical protein POPTR_0006s29040g [Populus trichocarpa]
           gi|550337325|gb|ERP59967.1| hypothetical protein
           POPTR_0006s29040g [Populus trichocarpa]
          Length = 671

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = -2

Query: 314 APFKFDAPSPDDLVSIGLQSVKLKSKGNASREREMDIPVKSAVAAKGSESSSASVTRGR- 138
           APFKFD PSPDD+VS GL+S K+ SK N    R  +     +   K S+ SSAS+ +G+ 
Sbjct: 81  APFKFDFPSPDDMVSKGLRSSKIGSKANLINSRSQNASAGISETVKSSDKSSASIPKGKQ 140

Query: 137 -RNGVNEND 114
            R GV+E +
Sbjct: 141 GRPGVDEGN 149


>ref|NP_196625.2| putative translation elongation factor 2EF1A / eIF-2-gamma
           [Arabidopsis thaliana] gi|222422871|dbj|BAH19422.1|
           AT5G10630 [Arabidopsis thaliana]
           gi|332004191|gb|AED91574.1| putative translation
           elongation factor 2EF1A / eIF-2-gamma [Arabidopsis
           thaliana]
          Length = 667

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
 Frame = -2

Query: 314 APFKFDAPSPDDLVSIGLQSVKLKSKGN---ASREREMDIPVKSAVAAKGSESSSASVTR 144
           APFKFDAPSPDDLVS GL S K   KG+   + R++E    V+     KG +SS  S +R
Sbjct: 89  APFKFDAPSPDDLVSNGLTSSKTGPKGSGDASMRQKEKQDSVEQKPLKKGGDSSETS-SR 147

Query: 143 GRRNGVNENDSA 108
           GR + +++   A
Sbjct: 148 GRHDKLDDKGGA 159


>emb|CAB89379.1| putative protein [Arabidopsis thaliana]
          Length = 804

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
 Frame = -2

Query: 314 APFKFDAPSPDDLVSIGLQSVKLKSKGN---ASREREMDIPVKSAVAAKGSESSSASVTR 144
           APFKFDAPSPDDLVS GL S K   KG+   + R++E    V+     KG +SS  S +R
Sbjct: 226 APFKFDAPSPDDLVSNGLTSSKTGPKGSGDASMRQKEKQDSVEQKPLKKGGDSSETS-SR 284

Query: 143 GRRNGVNENDSA 108
           GR + +++   A
Sbjct: 285 GRHDKLDDKGGA 296


>ref|NP_001190282.1| putative translation elongation factor 2EF1A / eIF-2-gamma
           [Arabidopsis thaliana] gi|332004192|gb|AED91575.1|
           putative translation elongation factor 2EF1A /
           eIF-2-gamma [Arabidopsis thaliana]
          Length = 668

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
 Frame = -2

Query: 314 APFKFDAPSPDDLVSIGLQSVKLKSKGN---ASREREMDIPVKSAVAAKGSESSSASVTR 144
           APFKFDAPSPDDLVS GL S K   KG+   + R++E    V+     KG +SS  S +R
Sbjct: 90  APFKFDAPSPDDLVSNGLTSSKTGPKGSGDASMRQKEKQDSVEQKPLKKGGDSSETS-SR 148

Query: 143 GRRNGVNENDSA 108
           GR + +++   A
Sbjct: 149 GRHDKLDDKGGA 160


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