BLASTX nr result

ID: Rehmannia26_contig00029400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029400
         (427 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350296.1| PREDICTED: transcription factor PIF1-like is...    65   9e-09
ref|XP_006350295.1| PREDICTED: transcription factor PIF1-like is...    65   9e-09
ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [V...    60   4e-07
ref|XP_004247109.1| PREDICTED: transcription factor PIF1-like [S...    59   9e-07
gb|EXC24143.1| hypothetical protein L484_015158 [Morus notabilis]      57   3e-06
ref|XP_006364548.1| PREDICTED: transcription factor PIF1-like [S...    57   3e-06

>ref|XP_006350296.1| PREDICTED: transcription factor PIF1-like isoform X2 [Solanum
           tuberosum]
          Length = 553

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 57/164 (34%), Positives = 74/164 (45%), Gaps = 26/164 (15%)
 Frame = +2

Query: 14  PPPEAPVTITVAPPRAVAEIRPPPSQKP--EIFPRLQNFTHFSRLSSKPRIEPVAKPSVT 187
           P P AP+     PP        PPS++   E   R QNF HFSRL  K R+EP       
Sbjct: 153 PSPAAPIGTAPRPPI-------PPSRRSVTENSNRFQNFGHFSRLP-KARLEPGQANLSK 204

Query: 188 ASKESTAADPNVNLTVRHQSRFSHT------VADRRAQVHTESG------TVAAVR---- 319
           + ++S   D NV      +SR SH       V        T +G      T  A+R    
Sbjct: 205 SLRDSAVVDSNVTPITGQESRVSHVPDNVVPVPSGNVGCSTINGSTGTATTSTAIREPTT 264

Query: 320 -CELTLTSSPGASDSNFSASAVQRPPKQK-------AAAEDRKR 427
            C++++TSSPG S ++ SASA    P  K       AAA+DRKR
Sbjct: 265 TCDISMTSSPGGSGNSVSASAEPPAPSHKAAPTATAAAADDRKR 308


>ref|XP_006350295.1| PREDICTED: transcription factor PIF1-like isoform X1 [Solanum
           tuberosum]
          Length = 578

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 57/164 (34%), Positives = 74/164 (45%), Gaps = 26/164 (15%)
 Frame = +2

Query: 14  PPPEAPVTITVAPPRAVAEIRPPPSQKP--EIFPRLQNFTHFSRLSSKPRIEPVAKPSVT 187
           P P AP+     PP        PPS++   E   R QNF HFSRL  K R+EP       
Sbjct: 153 PSPAAPIGTAPRPPI-------PPSRRSVTENSNRFQNFGHFSRLP-KARLEPGQANLSK 204

Query: 188 ASKESTAADPNVNLTVRHQSRFSHT------VADRRAQVHTESG------TVAAVR---- 319
           + ++S   D NV      +SR SH       V        T +G      T  A+R    
Sbjct: 205 SLRDSAVVDSNVTPITGQESRVSHVPDNVVPVPSGNVGCSTINGSTGTATTSTAIREPTT 264

Query: 320 -CELTLTSSPGASDSNFSASAVQRPPKQK-------AAAEDRKR 427
            C++++TSSPG S ++ SASA    P  K       AAA+DRKR
Sbjct: 265 TCDISMTSSPGGSGNSVSASAEPPAPSHKAAPTATAAAADDRKR 308


>ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
          Length = 517

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 54/159 (33%), Positives = 72/159 (45%), Gaps = 19/159 (11%)
 Frame = +2

Query: 8   SSPPPEAPVTITVAPPRAVAEIRP-------PPSQKPEIFPRLQNFTHFSRLSSKPRIEP 166
           +SPPP  P    ++P     E RP       PP+++ E+  ++ NF HF R S+    EP
Sbjct: 119 ASPPPARP---NLSPDVRQPEERPAATKPPIPPARRVELDSKVHNFLHFPRKSTAESGEP 175

Query: 167 VAKPSVTASKESTAADPNVNLTVRHQSRFSHTVADRRAQVHTESGTVAAVR--------- 319
            +  S  A  EST  D +    V  QSR S     +    ++  GT+             
Sbjct: 176 SS--SRPAGMESTVVDSSDTPGVCQQSRTSPAEWCKAELANSGYGTIGGATEAATSAAGE 233

Query: 320 ---CELTLTSSPGASDSNFSASAVQRPPKQKAAAEDRKR 427
               ELT+TSSP  S S  SASA    P  KA A+DRKR
Sbjct: 234 HTTFELTMTSSPEGSGSGGSASA-GAEPTPKAPADDRKR 271


>ref|XP_004247109.1| PREDICTED: transcription factor PIF1-like [Solanum lycopersicum]
          Length = 557

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 54/169 (31%), Positives = 74/169 (43%), Gaps = 31/169 (18%)
 Frame = +2

Query: 14  PPPEAPVTITVAPPRAVAEIRPPPSQKP--EIFPRLQNFTHFSRLSSKPRIEPVAKPSVT 187
           P P AP+     PP        PPS++   E   R QNF HFSRL  K R+EP       
Sbjct: 153 PSPAAPIGTAPRPPI-------PPSRRTVTENSNRFQNFGHFSRLP-KARLEPGQANLSK 204

Query: 188 ASKESTAADPNVNLTVRHQSRFSHTVADRR----------AQVHTESGTVAA-------- 313
           + ++ST  D NV      +SR +  + D            + V+  +GT  A        
Sbjct: 205 SPRDSTVVDSNVTPITGQESRVT-LIPDNVVAVPGGNVGCSTVNGSTGTATASTAIREPT 263

Query: 314 VRCELTLTSSPGASDSNFSASAVQ-----------RPPKQKAAAEDRKR 427
             C++++TSSPG S ++ SASA               P   AAA+DRKR
Sbjct: 264 TTCDISMTSSPGGSGNSVSASAEPPAPAPAPSHKGAAPTATAAADDRKR 312


>gb|EXC24143.1| hypothetical protein L484_015158 [Morus notabilis]
          Length = 559

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 52/147 (35%), Positives = 63/147 (42%), Gaps = 9/147 (6%)
 Frame = +2

Query: 14  PPPEAPVTITVAPPRAVAEIRPPPSQKPEIFPRLQNFTHFSRLSSKPRIEPVAKPSVTAS 193
           P    P T+  AP      +  PP       P ++NF HFSR  +K  +E  A PS + S
Sbjct: 159 PEIRTPATVAAAP------VPRPPIPPARTEPNVKNFGHFSR-HNKAMVE-AAGPSCSKS 210

Query: 194 KESTAADPNVNLTVRHQSRFSHTVADRRAQVHTESGTVA---------AVRCELTLTSSP 346
              T  D      V   SR        R+   T    +A         A+RCE T+TSSP
Sbjct: 211 AAVTVVDSCETPAVGPSSRVCEI---GRSPGETSYANLASGGGFSGKEAMRCEGTMTSSP 267

Query: 347 GASDSNFSASAVQRPPKQKAAAEDRKR 427
           G S    SASA   PP  K  AEDRKR
Sbjct: 268 GDS----SASAEPPPPPAKLPAEDRKR 290


>ref|XP_006364548.1| PREDICTED: transcription factor PIF1-like [Solanum tuberosum]
          Length = 515

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 57/173 (32%), Positives = 72/173 (41%), Gaps = 31/173 (17%)
 Frame = +2

Query: 2   FCSSPPPEAPVTITVAPPRAVA----EIRPP---PSQKP------EIFPRLQNFTHFSRL 142
           F ++ P  A VT   APP  +     EIRPP   PS +P      E+  RLQNF HFSRL
Sbjct: 101 FLNTTPSCAAVTSAAAPPGEIGTSTVEIRPPLAPPSSRPVRCTEGELPHRLQNFGHFSRL 160

Query: 143 ----------SSKPRIEPVAKPSVTASKESTAADP-----NVNLTVRHQSRFSHTVADRR 277
                     +S  R    A   V +++    A P      V+  V   S  +    +  
Sbjct: 161 PEGAILRNGNTSSSRHSVRASTIVDSNETPVVAGPEYMISRVSDDVPLASAVNVRGVEMT 220

Query: 278 AQVHTESGTVAAVRCELTLTSSPGASDSNFSASAVQRPPKQK---AAAEDRKR 427
           A   T         CELTLT+S   S  + S  +    P  K   AAAEDRKR
Sbjct: 221 AMATTSGDREVTTACELTLTASTSGSGGSVSTRSDLPQPSYKEADAAAEDRKR 273


Top