BLASTX nr result

ID: Rehmannia26_contig00029229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029229
         (396 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247308.1| PREDICTED: uncharacterized protein LOC101253...    63   5e-08
gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]                  62   6e-08
ref|XP_004231529.1| PREDICTED: uncharacterized protein LOC101255...    60   3e-07
ref|XP_006355902.1| PREDICTED: uncharacterized protein LOC102590...    56   4e-06

>ref|XP_004247308.1| PREDICTED: uncharacterized protein LOC101253719 [Solanum
           lycopersicum]
          Length = 710

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
 Frame = -3

Query: 271 HDEAWADYVKVDANARLMRFKSWPFYNDWVNIFGKYKATGEYAEDFTEAV--------NN 116
           + +AW D +KVD NA+ M  K WP + DW  IFGK +ATGE+AE   +AV          
Sbjct: 394 YPKAWDDLIKVDPNAKSMNLKKWPLFADWEEIFGKDRATGEFAEGPEDAVEEIERIESQE 453

Query: 115 VLNGMS 98
           + NGMS
Sbjct: 454 ITNGMS 459


>gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]
          Length = 1368

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
 Frame = -3

Query: 394  NMNFIYVLSGWEGSAADCRILRDA-----------ANFTA*AGMTTTK-MIEAHDEAWAD 251
            NM F++VL GWEGS AD R+LRDA              T+  G    K M+ A D  W  
Sbjct: 1170 NMQFVFVLPGWEGSVADSRVLRDALRRRNGLKVPHGTHTSGFGWDDQKNMVVADDPVWES 1229

Query: 250  YVKVDANARLMRFKSWPFYNDWVNIFGKYKATGEYAE 140
            Y++        R KS+PF+N+   I+ + +A G+ A+
Sbjct: 1230 YIQSHKEVAPFRIKSFPFFNELSLIYARDRAIGKDAQ 1266


>ref|XP_004231529.1| PREDICTED: uncharacterized protein LOC101255640 [Solanum
           lycopersicum]
          Length = 188

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
 Frame = -3

Query: 271 HDEAWADYVKVDANARLMRFKSWPFYNDWVNIFGKYKATGEYA---EDFTEAVNNV 113
           + +AW D +KVD NA+ M  K WP + DW  IFGK +ATGE+A   ED  E +  +
Sbjct: 117 YPKAWDDLIKVDPNAKSMNLKKWPLFADWEEIFGKDRATGEFAEGPEDVAEEIERI 172


>ref|XP_006355902.1| PREDICTED: uncharacterized protein LOC102590554 [Solanum tuberosum]
          Length = 370

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 21/49 (42%), Positives = 30/49 (61%)
 Frame = -3

Query: 259 WADYVKVDANARLMRFKSWPFYNDWVNIFGKYKATGEYAEDFTEAVNNV 113
           W D++K+D  A+ M  K WP + DW  IFGK +ATGE+ E   +A   +
Sbjct: 102 WIDFIKIDPQAKKMNTKKWPLFKDWEEIFGKDRATGEFVEGPLDATEEI 150


Top