BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00029215
         (496 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   254   1e-65
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...   184   8e-45
gb|EXB89104.1| hypothetical protein L484_016664 [Morus notabilis]     162   6e-38
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   157   2e-36
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   144   9e-33
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]   140   2e-31
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     139   3e-31
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              139   4e-31
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              139   4e-31
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        139   5e-31
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               138   7e-31
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                138   7e-31
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              138   9e-31
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   137   1e-30
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]   137   2e-30
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     135   4e-30
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              135   4e-30
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   135   4e-30
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]   135   6e-30
gb|AFB73912.1| polyprotein [Citrus sinensis]                          134   1e-29

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  254 bits (648), Expect = 1e-65
 Identities = 120/164 (73%), Positives = 141/164 (85%), Gaps = 3/164 (1%)
 Frame = +3

Query: 12  KDECAFCHEKGHWKKDCPKLKNKGKAPQDACVAEGES--EDEFSLVVSPLISRS-DEWIL 182
           KDECAFCHEKGHWKKDCPKL+ K K  QDA VAE +S  E + SL+VS   S   DEWIL
Sbjct: 168 KDECAFCHEKGHWKKDCPKLQKKEKVLQDANVAECKSDVESDISLIVSLSASLYLDEWIL 227

Query: 183 DSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYV 362
           DSGCTYHM P+++WFF F+E++GGVVYMGNDN CKT GIGSI+L+NHDGSTR+L DVRYV
Sbjct: 228 DSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYV 287

Query: 363 PNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMKGIRRNN 494
           P LKKNLISLGALESKGL+VT+RDG+LKATSG+LV++KG+ +NN
Sbjct: 288 PKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGVMKNN 331


>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score =  184 bits (468), Expect = 8e-45
 Identities = 85/118 (72%), Positives = 98/118 (83%), Gaps = 3/118 (2%)
 Frame = +3

Query: 12  KDECAFCHEKGHWKKDCPKLKNKGKAPQDACVAEGES--EDEFSLVVS-PLISRSDEWIL 182
           KDECAFCHEKGHWKKDCPKL+ K K PQDA VAE +S  E + SL+VS    S  DEWIL
Sbjct: 207 KDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECKSDVESDISLIVSLSASSYPDEWIL 266

Query: 183 DSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVR 356
           DSGCTYHM P+++WFF F+E++GGVVYMGNDN CKT GIGSI+L+NHDGSTR+L DVR
Sbjct: 267 DSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTAGIGSIKLRNHDGSTRILRDVR 324


>gb|EXB89104.1| hypothetical protein L484_016664 [Morus notabilis]
          Length = 718

 Score =  162 bits (409), Expect = 6e-38
 Identities = 86/156 (55%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
 Frame = +3

Query: 3   KLDKDE-CAFCHEKGHWKKDCPKLKNKGKAPQDACVAEGESEDEFSLVVSPLISRSDEWI 179
           K+  DE CA  +    WKKD  + K+   A  +      + E EF L+ +   S+ DEWI
Sbjct: 27  KITFDEVCAALYNNEIWKKDQKEHKSTSAAKYE------DDESEFVLISTLSKSQYDEWI 80

Query: 180 LDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRY 359
           +DSGCTYHM   KEWFFNFEE+N GVV +G ++A ++TGIGSI LK HDGST+VLTDVRY
Sbjct: 81  MDSGCTYHMCSNKEWFFNFEELNEGVVNIGTNDALQSTGIGSIHLKCHDGSTKVLTDVRY 140

Query: 360 VPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLV 467
           VP+LKKN I LG L SKG  VT+RDG+LK  S +LV
Sbjct: 141 VPHLKKNHIFLGVLGSKGFTVTMRDGILKVVSSTLV 176


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/161 (46%), Positives = 105/161 (65%), Gaps = 3/161 (1%)
 Frame = +3

Query: 15  DECAFCHEKGHWKKDCPKLKNKG-KAPQDACVAEGE--SEDEFSLVVSPLISRSDEWILD 185
           D C +C EKGHWK DCPK K +  K    A VAE +  SE++ +LV       SD W+LD
Sbjct: 223 DVCNYCKEKGHWKFDCPKKKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVWVLD 282

Query: 186 SGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVP 365
           SG +YH+ P +EWF  +E+++GG + M N + CK  G GSI+++ HDGS   L +VR+VP
Sbjct: 283 SGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVP 342

Query: 366 NLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMKGIRR 488
            + KNLISL  L+SKG   + +DGVL+   GS +++KG+ R
Sbjct: 343 LMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMR 383


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  144 bits (364), Expect = 9e-33
 Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 13/170 (7%)
 Frame = +3

Query: 21  CAFCHEKGHWKKDCPKLKNK----------GKAPQD---ACVAEGESEDEFSLVVSPLIS 161
           C +C   GH   DC KL+NK          GK  +    A   + + + E  +  +  + 
Sbjct: 178 CKYCKRGGHDISDCWKLQNKEKHKGNYKPKGKQEEQGKAAVATDNKPDAELLVAYAGCVQ 237

Query: 162 RSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRV 341
            SDEW+LD+GCTYHM P ++WF  +E + GG V MG++  CK  G+G+I++K  DG  R 
Sbjct: 238 TSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRT 297

Query: 342 LTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMKGIRRN 491
           L+DVR++P+LK+NLISL  L+ KG   +  DG+LK T GSLVVMK   +N
Sbjct: 298 LSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKN 347


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score =  140 bits (353), Expect = 2e-31
 Identities = 70/166 (42%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
 Frame = +3

Query: 3   KLDKDECAFCHEKGHWKKDCPKLK--------NKGKAPQDACVAEGESEDEFSLVVSPLI 158
           K  K +C  CH++GH+KKDCP ++        N+G A     + +G   D   ++    +
Sbjct: 222 KTKKFKCFICHKEGHFKKDCPDMRQNTXKKTMNEGDATM---ILDGY--DNAGVLNVAEV 276

Query: 159 SRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTR 338
               EWILDSGC++HM P+K WF +F+E NGG V +GN+  CK  G G++++K++DG  R
Sbjct: 277 DSGKEWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTGTVKIKHYDGIER 336

Query: 339 VLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
           VL D+RY+P LK NLISLG L+  G         L+   GSL VMK
Sbjct: 337 VLEDIRYIPELKMNLISLGMLDKLGYTFKSEPNSLRVARGSLTVMK 382


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  139 bits (351), Expect = 3e-31
 Identities = 69/165 (41%), Positives = 98/165 (59%), Gaps = 13/165 (7%)
 Frame = +3

Query: 21  CAFCHEKGHWKKDCPKLKNKGKAPQD-------------ACVAEGESEDEFSLVVSPLIS 161
           C +C   GH   +C KL++K K  +              A V + +S+ E  +  +    
Sbjct: 145 CKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQ 204

Query: 162 RSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRV 341
            SD+WILD+ CTYHM P ++WF  +E + GG V MG+D  C+  GIG++++K  DG  R 
Sbjct: 205 TSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 264

Query: 342 LTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
           L DVR++PNLK++LISL  L+ KG   +  DG+LK T GSLVVMK
Sbjct: 265 LLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMK 309


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  139 bits (350), Expect = 4e-31
 Identities = 69/163 (42%), Positives = 102/163 (62%), Gaps = 10/163 (6%)
 Frame = +3

Query: 18  ECAFCHEKGHWKKDCPKLKNKGKAPQDACVAEG---ESEDEFSLVVSPLISRS------- 167
           +C  C  KGH KK+C  +K  G+   +A  ++G    + D+  ++ S   + S       
Sbjct: 229 KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLN 288

Query: 168 DEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLT 347
           D WI+DSG T+HM+P ++WFF++E I+ G VYMGND+A +  G+G+IRLK HDG+ R + 
Sbjct: 289 DVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348

Query: 348 DVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
            VR+V  LKKNL+S+G L+  G  +    G+LK   G+LVVMK
Sbjct: 349 GVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMK 391


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  139 bits (350), Expect = 4e-31
 Identities = 69/163 (42%), Positives = 102/163 (62%), Gaps = 10/163 (6%)
 Frame = +3

Query: 18  ECAFCHEKGHWKKDCPKLKNKGKAPQDACVAEG---ESEDEFSLVVSPLISRS------- 167
           +C  C  KGH KK+C  +K  G+   +A  ++G    + D+  ++ S   + S       
Sbjct: 229 KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLN 288

Query: 168 DEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLT 347
           D WI+DSG T+HM+P ++WFF++E I+ G VYMGND+A +  G+G+IRLK HDG+ R + 
Sbjct: 289 DVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348

Query: 348 DVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
            VR+V  LKKNL+S+G L+  G  +    G+LK   G+LVVMK
Sbjct: 349 GVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMK 391


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  139 bits (349), Expect = 5e-31
 Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 13/165 (7%)
 Frame = +3

Query: 21  CAFCHEKGHWKKDCPKLKNK----------GKAPQD---ACVAEGESEDEFSLVVSPLIS 161
           C +C   GH    C KL++K          GK  ++   A V + +S+ E  +  +    
Sbjct: 236 CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQ 295

Query: 162 RSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRV 341
            SD+WILD+ CTYHM P ++WF  +E + GG V MG+D  C+  GIG++++K  DG  R 
Sbjct: 296 TSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 355

Query: 342 LTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
           L+DVR++PNLK++LISL  L+ KG   +  DG+LK T GSLVVMK
Sbjct: 356 LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMK 400


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  138 bits (348), Expect = 7e-31
 Identities = 69/165 (41%), Positives = 98/165 (59%), Gaps = 13/165 (7%)
 Frame = +3

Query: 21  CAFCHEKGHWKKDCPKLKNKGKAP-------------QDACVAEGESEDEFSLVVSPLIS 161
           C +C   GH    C KL++K K               + A V + +S+ E  +  +    
Sbjct: 53  CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQ 112

Query: 162 RSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRV 341
            SD+WILD+ CTYHM P ++WF  +E + GG V MG+D  C+  GIG++++K  DG  R 
Sbjct: 113 TSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 172

Query: 342 LTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
           L+DVR++PNLK++LISL  L+ KG   +  DG+LK T GSLVVMK
Sbjct: 173 LSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMK 217


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  138 bits (348), Expect = 7e-31
 Identities = 69/165 (41%), Positives = 98/165 (59%), Gaps = 13/165 (7%)
 Frame = +3

Query: 21  CAFCHEKGHWKKDCPKLKNKGKAP-------------QDACVAEGESEDEFSLVVSPLIS 161
           C +C   GH    C KL++K K               + A V + +S+ E  +  +    
Sbjct: 221 CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQ 280

Query: 162 RSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRV 341
            SD+WILD+ CTYHM P ++WF  +E + GG V MG+D  C+  GIG++++K  DG  R 
Sbjct: 281 TSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 340

Query: 342 LTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
           L+DVR++PNLK++LISL  L+ KG   +  DG+LK T GSLVVMK
Sbjct: 341 LSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMK 385


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  138 bits (347), Expect = 9e-31
 Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 10/163 (6%)
 Frame = +3

Query: 18  ECAFCHEKGHWKKDCPKLKNKGKAPQDACVAEG---ESEDEFSLVVSPLISRS------- 167
           +C  C  KGH KK+C  +K  G+   +A  ++G    + D+  ++ S   + S       
Sbjct: 229 KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLN 288

Query: 168 DEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLT 347
           D WI+DSG T+HM+P ++WF+++E I+ G VYMGND+A +  G+G+IRLK HDG+ R + 
Sbjct: 289 DVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348

Query: 348 DVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
            VR+V  LKKNL+S+G L+  G  +    G+LK   G+LVVMK
Sbjct: 349 GVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMK 391


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  137 bits (346), Expect = 1e-30
 Identities = 74/177 (41%), Positives = 107/177 (60%), Gaps = 17/177 (9%)
 Frame = +3

Query: 12  KDECAFCHEKGHWKKDCPKLKNKGKAPQDACVAEGESE-----------------DEFSL 140
           K  C  C ++GH+KK C K   + K+ Q      GES                  DE +L
Sbjct: 218 KRVCWICGKEGHFKKQCYKWIERNKSKQQGS-DNGESSLAKSTEAFNPAMVLLATDE-TL 275

Query: 141 VVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKN 320
           VV+  I+  +EW+LD+GC++HM+P K+WF +F+E++ G V MGND      GIGSI+++N
Sbjct: 276 VVTDSIA--NEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRN 333

Query: 321 HDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMKGIRRN 491
            DGS  +LTDVRY+PN+ +NLISLG LE +G     +DG+LK   G   ++KG +R+
Sbjct: 334 SDGSQVILTDVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGCSTILKGQKRD 390


>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score =  137 bits (344), Expect = 2e-30
 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 8/168 (4%)
 Frame = +3

Query: 12  KDECAFCHEKGHWKKDCP--------KLKNKGKAPQDACVAEGESEDEFSLVVSPLISRS 167
           K +C  CH++GH+KKDC         K  N+G A   A + +G    +   V    +   
Sbjct: 268 KFKCFICHKEGHFKKDCSDKRQNTIKKTVNEGDA---AVILDGYDSAKVLNVAE--MDSG 322

Query: 168 DEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLT 347
            EWILDSGC++HM P+K WF +F+E NGG V +GN+  CK  G   +R+K++DG  RVL 
Sbjct: 323 KEWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTSIVRIKHYDGIERVLE 382

Query: 348 DVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMKGIRRN 491
            VRY+P LK+NLISLG L+  G     +   L+   GSL VMKG  +N
Sbjct: 383 VVRYIPELKRNLISLGMLDKLGYTFKSKPNSLRVARGSLTVMKGTIKN 430


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  135 bits (341), Expect = 4e-30
 Identities = 69/165 (41%), Positives = 100/165 (60%), Gaps = 13/165 (7%)
 Frame = +3

Query: 21  CAFCHEKGHWKKDCPKLKNK----------GKAPQD---ACVAEGESEDEFSLVVSPLIS 161
           C +C   GH   +C KL++K          GK  ++   A V + +S+ E  +  +    
Sbjct: 271 CKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQ 330

Query: 162 RSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRV 341
            SD+WILD+  TYHM P ++WF  +E + GG V MG+D  C+  GIG++++K  DG  R 
Sbjct: 331 TSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRT 390

Query: 342 LTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
           L+DVR++PNLK++LISL  L+ KG   +  DG+LK T GSLVVMK
Sbjct: 391 LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMK 435


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  135 bits (341), Expect = 4e-30
 Identities = 68/163 (41%), Positives = 101/163 (61%), Gaps = 10/163 (6%)
 Frame = +3

Query: 18  ECAFCHEKGHWKKDCPKLKNKGKAPQDACVAEG---ESEDEFSLVVSPLISRS------- 167
           +C  C  KGH KK+C   K  G+   +A  ++G    + D+  ++ S   + S       
Sbjct: 229 KCYGCGMKGHVKKECWNNKKNGEKNSEATTSQGCVASTSDDGEILYSEAATSSEGERQLN 288

Query: 168 DEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLT 347
           D WI+DSG T+HM+P ++WF+++E I+ G VYMGND+A +  G+G+IRLK HDG+ R + 
Sbjct: 289 DVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348

Query: 348 DVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
            VR+V  LKKNL+S+G L+  G  +    G+LK   G+LVVMK
Sbjct: 349 GVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMK 391


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  135 bits (341), Expect = 4e-30
 Identities = 69/165 (41%), Positives = 100/165 (60%), Gaps = 13/165 (7%)
 Frame = +3

Query: 21  CAFCHEKGHWKKDCPKLKNK----------GKAPQD---ACVAEGESEDEFSLVVSPLIS 161
           C +C   GH   +C KL++K          GK  ++   A V + +S+ E  +  +    
Sbjct: 271 CKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQ 330

Query: 162 RSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRV 341
            SD+WILD+  TYHM P ++WF  +E + GG V MG+D  C+  GIG++++K  DG  R 
Sbjct: 331 TSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRT 390

Query: 342 LTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
           L+DVR++PNLK++LISL  L+ KG   +  DG+LK T GSLVVMK
Sbjct: 391 LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMK 435


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score =  135 bits (340), Expect = 6e-30
 Identities = 62/159 (38%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
 Frame = +3

Query: 18  ECAFCHEKGHWKKDCPKLKNKGKAP-QDACVAEGESEDEFSLVVSPLISRSDEWILDSGC 194
           +C  C++ G  ++ CP  + + K   Q +     +  D   ++   L    +EW+LDSGC
Sbjct: 125 KCYHCNKIGQIRRICPDRQQEEKTQAQGSAAIIDDGYDSTEVLTIRLNPNHEEWVLDSGC 184

Query: 195 TYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLK 374
           TYHM P ++WF +++E+NGG + +GN+ +C   GIG++ +  HDG TR L +VR+VP+LK
Sbjct: 185 TYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMAINMHDGKTRTLKEVRHVPDLK 244

Query: 375 KNLISLGALESKGLIVTLRDGVLKATSGSLVVMKGIRRN 491
           +NLISLG L+  G     ++G L  +  ++VVMKG +RN
Sbjct: 245 RNLISLGTLDKSGYNFKAKNGKLTISKXAMVVMKGQKRN 283


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  134 bits (337), Expect = 1e-29
 Identities = 67/164 (40%), Positives = 104/164 (63%), Gaps = 11/164 (6%)
 Frame = +3

Query: 18  ECAFCHEKGHWKKDC--PKLKNKGKAPQDA----CVAEGESEDEFSLVVSPLISR----- 164
           +C  C +KGH KK+C   + + +GK P+ +    CVA    + E     + ++S      
Sbjct: 229 KCYNCGKKGHVKKECWSNQKRREGKEPESSNAQGCVASTSDDGEILYSEATIVSEGRKRL 288

Query: 165 SDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVL 344
           SD W++DSG T+HM+  +EWF  +E I+GG VYMGND+A +  GIG+I++K  DG+ R +
Sbjct: 289 SDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTI 348

Query: 345 TDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVMK 476
            +VR+V  LKKNL+SLG ++S G    + +G++K   G+LV+MK
Sbjct: 349 EEVRHVNGLKKNLLSLGQMDSHGCKTHVENGIMKIVKGALVLMK 392