BLASTX nr result
ID: Rehmannia26_contig00029127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00029127
(492 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625... 111 9e-23
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 108 6e-22
ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616... 100 4e-20
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616... 101 1e-19
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 94 1e-17
ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A... 94 2e-17
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm... 89 5e-16
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 87 2e-15
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355... 82 6e-14
gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao] 82 7e-14
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ... 82 1e-13
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ... 82 1e-13
gb|ABA99647.1| hypothetical protein LOC_Os12g38160 [Oryza sativa... 80 3e-13
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 79 5e-13
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 79 5e-13
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A... 78 1e-12
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ... 77 3e-12
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ... 75 5e-12
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 76 5e-12
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ... 76 5e-12
>ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]
Length = 412
Score = 111 bits (278), Expect = 9e-23
Identities = 62/160 (38%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
VP KVKN +WRA HN LPT L+S+ V V +C VCN ET+ H CSFAK CW+
Sbjct: 178 VPNKVKNFIWRAAHNVLPTALNLISKRVDVPAMCSVCNAYEETVLHSLVACSFAKSCWTS 237
Query: 311 LSF-FVQSSAPLSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQIM 135
S FV + +FL L V++ S + M+ W +W RN VWN S QI+
Sbjct: 238 SSVGFVGYCS--NFLDWLAHVFTRCSKDECNTAMMICWRIWVNRNNKVWNNTTSSVCQIL 295
Query: 134 NQGSILLSQWEVAR--AADMGDWQVSKMDGAIRWKKIEAG 21
N L QW+ A+ D+ D + GA+ W++ + G
Sbjct: 296 NSAGQFLYQWQAAKQQVFDVNDDTHRLVHGALCWEQPKFG 335
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 108 bits (271), Expect = 6e-22
Identities = 59/160 (36%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCW-- 318
VP+KVK+ +WRA+ + LPT E LL + V+V C C+ SE++ H+ C FA+ CW
Sbjct: 131 VPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHILLQCPFARTCWMT 190
Query: 317 SLLSFFVQSSAPLSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQI 138
S + FF S L +L L ++ S+E + M+ WSLW+ RN++VW K Q+
Sbjct: 191 SSIGFFGDGSNLLLWLEAL---FNRYSLEQTQLAVMICWSLWQNRNDMVWRGKTSGVQQL 247
Query: 137 MNQGSILLSQWEVARAADMGDWQVSKM-DGAIRWKKIEAG 21
+N L QW++ R Q S + GAI W+ AG
Sbjct: 248 LNSAGHFLFQWQLVRKQQFLFSQPSPIGHGAICWEPPVAG 287
>ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]
Length = 977
Score = 100 bits (249), Expect(2) = 4e-20
Identities = 62/160 (38%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
V KVKN VWRA N LPT L+S+ V + C VC ET H C+ AK CW
Sbjct: 807 VAHKVKNFVWRAATNVLPTAVNLISKRVNIPPTCAVCLASDETALHSLVECNVAKACWIS 866
Query: 311 LSF-FVQSSAPLSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQIM 135
S FV SFL L +++ S E M+ W +W RN+ VWN K S +Q++
Sbjct: 867 SSVGFVGHC--YSFLEWLDHIFTRCSKEECHVAMMICWRVWINRNDKVWNNKTGSVNQVL 924
Query: 134 NQGSILLSQWEVARAADM-GDWQVSKM-DGAIRWKKIEAG 21
N LL QW+VA+ D V K+ GAI W++ + G
Sbjct: 925 NSAGQLLYQWQVAKKQQFYADADVHKLVYGAICWERPKFG 964
Score = 23.1 bits (48), Expect(2) = 4e-20
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 37 KKSKQGWVKCNI 2
++ K GWVKCN+
Sbjct: 959 ERPKFGWVKCNV 970
>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
Length = 510
Score = 101 bits (251), Expect = 1e-19
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
VPAKVK+ +W A+ N LPT + L V+V +C +CN E +AH +CSFAK CW L
Sbjct: 204 VPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVAHCLVNCSFAKSCW-L 262
Query: 311 LSFFVQSSAPLSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQIMN 132
LS +F+ L ++S S ++ +M WSLW+ +N VW + S ++N
Sbjct: 263 LSPIGYVGGCENFMDWLEGIFSRYSSDDCDLAAMTCWSLWENKNAKVWKNRKGRLSSVLN 322
Query: 131 QGSILLSQWEVARAADMGD-WQVSKMDGAIRWKK 33
+L QW+ R + D VS GA+ W++
Sbjct: 323 LAGQVLFQWKSVRKLQVFDNNSVSSSHGAVCWQR 356
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 94.4 bits (233), Expect = 1e-17
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
VP KVK +WR+ N LPT+ RL R V + C +C E E H+FF+C+ +++CW
Sbjct: 1425 VPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQ 1484
Query: 311 LSFF--VQSSAP--LSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPS 144
L + VQ A LSF + + R + ++WS+WK+RN+ +W + M+ +
Sbjct: 1485 LGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIWRNEVMTTA 1544
Query: 143 QIMNQGSILLSQWEVA----RAADMGDWQVSKMDGAIRWKKIEAGMG 15
+ ++G LL+ W+ A R D G ++ + +D A + G+G
Sbjct: 1545 AVRDRGLNLLTGWQNAQDIWRKPDEGHFKCN-VDAAFFKESNRVGIG 1590
>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 459
Score = 94.0 bits (232), Expect = 2e-17
Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCW-- 318
VPAKV+N VWRA N LPT L S++V ++ LC V N + ET+ H+ C FA+ CW
Sbjct: 178 VPAKVRNFVWRAASNVLPTAVNLRSKHVSLNDLCLVGNFDKETVLHLLVDCPFARSCWIK 237
Query: 317 SLLSFFVQSSAPLSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQI 138
S + FF S SF L ++ N + E M+ W LW RN +VW K + QI
Sbjct: 238 SKVGFFGIYS---SFKDWLQALFRNCTNEQCWIAVMVCWKLWCNRNNLVWQGKCDTTKQI 294
Query: 137 MNQGSILLSQWEVARAADMGDWQVSKMDGAIRWKKIEAGMG 15
+N + W R W +D + + G+G
Sbjct: 295 VNAAGVGAVAWSPPRVG----WLKCNIDATVFANEGRVGLG 331
>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
gi|223541858|gb|EEF43404.1| conserved hypothetical
protein [Ricinus communis]
Length = 668
Score = 89.4 bits (220), Expect = 5e-16
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
+P KV+NL+W+ N + T L R V + LC CN E ETL HV F CS A++CW L
Sbjct: 436 IPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCSMARECWDL 495
Query: 311 LSFFVQSSAPLSFLSCLHMVWSNGSIENRKD----VSMLLWSLWKKRNEIVWNQKHMSPS 144
L F + S P C + N I+N +D ++++ SLW +RN VWN++ +
Sbjct: 496 LGF--RFSFPTESPICSWI--QNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQSNTTY 551
Query: 143 QIMNQGSILLSQWEVARAAD 84
+++ + LL Q A++AD
Sbjct: 552 GVISPANQLLEQRTRAQSAD 571
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 87.0 bits (214), Expect = 2e-15
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Frame = -2
Query: 482 KVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSLLSF 303
K+K ++WR I LPT+ RLL+R + + C C E ET+ HV F C +A W L +F
Sbjct: 1370 KIKYMLWRTISKALPTRSRLLTRGMDIDPHCPRCPTEEETINHVLFTCPYAASIWGLSNF 1429
Query: 302 -----FVQSSAPLSFLSCLHMVWSNGSI--ENRKDVSMLLWSLWKKRNEIVWNQKHMSPS 144
S +S L +SN ++ E R L+W LWK RN +V+N+ S S
Sbjct: 1430 PWLPGHTFSQDTEENISFLINSFSNNTLNTEQRLAPFWLIWRLWKARNNLVFNKFSESCS 1489
Query: 143 QIMNQGSILLSQW--EVARAADMGDWQVSKMDGAIRWKK 33
+++ Q +++W V R D S +RWKK
Sbjct: 1490 RVVTQTEAEVNEWLQSVNRREDASVLTRSSHRANVRWKK 1528
>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
Cytochrome P450 [Medicago truncatula]
Length = 687
Score = 82.4 bits (202), Expect = 6e-14
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
+P KVKN +WRA N LPT+ RL S+ VQ C VC+ E H+FF CS + W
Sbjct: 374 LPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCSKSMLYWQR 433
Query: 311 LSFFVQSSA----PLSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPS 144
+ + A +SF + + + + + ++ S+ LWS+WK RN VWN +
Sbjct: 434 IGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKVWNNITDTAQ 493
Query: 143 QIMNQGSILLSQWEVARAADMGDWQVSKMDGAIRWKKIEAG 21
I + LL+ W A+ Q ++W K G
Sbjct: 494 DICARAGSLLTSWRNAQNIRHPSPQNPSTPNDLKWVKPSPG 534
>gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao]
Length = 290
Score = 82.0 bits (201), Expect = 7e-14
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCW-- 318
VP K +W+ IH+ LPT+ L+ R V + ++C +C +E ET H +C F++ W
Sbjct: 70 VPRKTMLFMWKVIHDILPTRSELIKRGVNIELMCPLCEIEVETAFHCLCNCQFSRLVWLT 129
Query: 317 SLLSFFVQSSAPLSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQI 138
+ F S+ S + L V+ + + ++ LLW++WK RN +V+NQ +P +
Sbjct: 130 TKCGFRDISNFHDSIIDWLQGVFEVLNKDETEEFICLLWAIWKTRNVVVFNQSRSTPMVV 189
Query: 137 MNQGSILLSQWEVARAA 87
+ G L+ Q+ A A
Sbjct: 190 VEIGLDLIHQFRRASRA 206
>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 519
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
VP K+KN +WR LPT+ +L + VQ C C+ SE + H+F C+F + W L
Sbjct: 176 VPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQL 235
Query: 311 LSFFVQ-SSAPLSFLSCLHMVWS--NGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQ 141
+ + A + F + +++ + + + +WSLWK+RN VW K+ S +
Sbjct: 236 SDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWENKNESCAM 295
Query: 140 IMNQGSILLSQWEVARA 90
+++ +++ +W++A A
Sbjct: 296 TVDRARVMMEEWQLATA 312
>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 612
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
VP K+KN +WR LPT+ +L + VQ C C+ SE + H+F C+F + W L
Sbjct: 269 VPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQL 328
Query: 311 LSFFVQ-SSAPLSFLSCLHMVWS--NGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQ 141
+ + A + F + +++ + + + +WSLWK+RN VW K+ S +
Sbjct: 329 SDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWENKNESCAM 388
Query: 140 IMNQGSILLSQWEVARA 90
+++ +++ +W++A A
Sbjct: 389 TVDRARVMMEEWQLATA 405
>gb|ABA99647.1| hypothetical protein LOC_Os12g38160 [Oryza sativa Japonica Group]
Length = 305
Score = 80.1 bits (196), Expect = 3e-13
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
+P KVK +WR I N LPT L R + CH CN ++T H+FFHCSFA+ W +
Sbjct: 63 IPPKVKTFMWRLIRNALPTANNLHFRIPDILDSCHRCN-SAKTSVHLFFHCSFARLSWMI 121
Query: 311 LSFFV-------QSSAP--LSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQK 159
F + +S P +SF+ + ++ E+ + + LW +WK RN + +K
Sbjct: 122 SDFKLNFQIIDSMNSVPEIISFI-----LAASSKTESFQKFCIFLWFIWKARNGSYFKRK 176
Query: 158 HMSPSQIMNQGSILLSQWEVARAADMGD 75
+ PSQ+ ++ S + A D
Sbjct: 177 NWEPSQVCIAADVMASNYNTLTQAQNQD 204
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
+P KVK +WRA+ N LPT E L R +C C ++ ET++HV C A+K W L
Sbjct: 1141 LPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDL 1200
Query: 311 LSFFVQSSAP--LSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQK 159
VQ S F S + +WS S + + + W +W RN+ ++ K
Sbjct: 1201 APLIVQPSKDHNQDFFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEGK 1253
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
+P KVK +WRA+ N LPT E L R +C C ++ ET++HV C A+K W L
Sbjct: 454 LPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDL 513
Query: 311 LSFFVQSSAP--LSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQK 159
VQ S F S + +WS S + + + W +W RN+ ++ K
Sbjct: 514 APLIVQPSKDHNQDFFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEGK 566
>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 968
Score = 77.8 bits (190), Expect = 1e-12
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
VP KVK +WRA H LP ERL RN+ C C ET+ H C AKK W
Sbjct: 649 VPNKVKLFLWRACHAFLPCVERLFKRNICSHSGCGRCGEGEETVVHSLCWCRVAKKVWKC 708
Query: 311 LSF--FVQSSAPLSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQI 138
+ +S SF +V G+I+N + +++ W LWK RNE+ +K + P QI
Sbjct: 709 TYWRGVYKSWQISSFADLFGLVAMEGNIKNTELFALICWWLWKDRNEVFHGKKGLEPRQI 768
Query: 137 MNQ 129
+ +
Sbjct: 769 VEK 771
>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 393
Score = 76.6 bits (187), Expect = 3e-12
Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 20/177 (11%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
VP +VK LVWR PT+ RL+SR V C C E H+FFHC A W+
Sbjct: 64 VPPRVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNT 123
Query: 311 LSFFVQSSAPLSFL----SCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPS 144
+ + + LS + + S + + ++WS+WK RN +W Q S
Sbjct: 124 ANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLWQQVSESSV 183
Query: 143 QIMNQGSILLSQWEVA----------------RAADMGDWQVSKMDGAIRWKKIEAG 21
I+ + LL W A R G IRW+K ++G
Sbjct: 184 TILERAKHLLEGWRKANHKQGLLGQVHSPTNSRPQTHDSQNTDNRYGNIRWRKPKSG 240
>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|3184275|gb|AAC18922.1| putative reverse transcriptase
[Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
H domain-containing protein [Arabidopsis thaliana]
Length = 365
Score = 75.1 bits (183), Expect(2) = 5e-12
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
V K+K+ +WR + L T RL SRN+ +C C +E ET+ H+ F+C + + W
Sbjct: 42 VAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQSVWRS 101
Query: 311 LSFFV--QSSAPLSFLSCLHMVWSNGSIENRKDVS-----MLLWSLWKKRNEIVWNQKHM 153
+ + Q P SF L+ + + + ++W LWK RN ++ QK
Sbjct: 102 ANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIMWRLWKSRNVFLFQQKCQ 161
Query: 152 SPSQIMNQGSILLSQW 105
SP +G ++W
Sbjct: 162 SPDYEARKGIQDATEW 177
Score = 21.2 bits (43), Expect(2) = 5e-12
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 25 QGWVKCN 5
+GWVKCN
Sbjct: 211 EGWVKCN 217
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 75.9 bits (185), Expect = 5e-12
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
+P K++ VWRA N LP+ E L R + C +C M E + H C AKK W L
Sbjct: 817 LPKKIRIFVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRL 876
Query: 311 LSFF--VQSSAPLSFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPSQI 138
F+ +Q++ LS LH V S + +++LW+ W RN+ ++ K +P +
Sbjct: 877 SLFYIDIQAAPGQDILSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFKGKRENPQSV 936
Query: 137 MNQGSILLSQWE-VARAADMGDWQVSKMDGAIRWKKIEAG 21
+ + ++ ++ V +AD+ + K+ + W + G
Sbjct: 937 VAKAEAVMEAYKRVQPSADVSHGKQQKV-AQLGWNPPQEG 975
>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 355
Score = 75.9 bits (185), Expect = 5e-12
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Frame = -2
Query: 491 VPAKVKNLVWRAIHNTLPTKERLLSRNVQVSVLCHVCNMESETLAHVFFHCSFAKKCWSL 312
+P +V+ +WR HN LPT+ L +R +Q C + +E H+FF C+ A CW
Sbjct: 123 IPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFENFAECHTHLFFVCAKAMDCWKN 182
Query: 311 LSFFVQSSAPL----SFLSCLHMVWSNGSIENRKDVSMLLWSLWKKRNEIVWNQKHMSPS 144
+ V S L +F + L + ++ MLLWSLWK RN +W+ + +
Sbjct: 183 IGLHVVLSELLPLANNFTTLLFDFMHRLCSQQQQAAGMLLWSLWKSRNIKLWDSTDTTTA 242
Query: 143 QIMNQGSILLSQWEVARAADMGDWQVSKMDGAIRWKKIEAGM 18
+++ L +W ++A Q + I W K GM
Sbjct: 243 ITISRAKDTLHEWSCMQSAKT---QPINPNHHISWVKPTGGM 281