BLASTX nr result
ID: Rehmannia26_contig00029043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00029043
(654 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 347 1e-93
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 330 3e-88
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 308 7e-82
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 305 8e-81
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 300 2e-79
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 300 2e-79
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 298 9e-79
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 297 2e-78
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 297 2e-78
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 297 2e-78
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 297 2e-78
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 293 4e-77
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 283 3e-74
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 282 7e-74
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 278 1e-72
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 278 1e-72
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 278 1e-72
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 277 2e-72
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 277 2e-72
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 276 4e-72
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 347 bits (891), Expect = 1e-93
Identities = 159/217 (73%), Positives = 185/217 (85%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
DAKFLSHFW+ LW KLGTKLLFSTTCHPQTDGQTEVVNRTLS LLR +IQKNLK WE+CL
Sbjct: 259 DAKFLSHFWKTLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRAIIQKNLKTWEECL 318
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNR+VHSAT F+PFE+VYGFNPL+PLDL+P+P++E+AS+DG
Sbjct: 319 PHVEFAYNRTVHSATKFSPFEIVYGFNPLTPLDLLPLPIDERASMDGKKKAEFVKQLHER 378
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
+IEK+TE+Y QANKGRKQV+F+PGDWVW+H+RKERFP +R+SKL P GDGPFQV+A
Sbjct: 379 TRQHIEKRTEQYATQANKGRKQVVFQPGDWVWVHMRKERFPAQRRSKLLPRGDGPFQVVA 438
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDSRT 653
+INDNAYK+DLPGEYNV ATFNVSDLSPF+ DSRT
Sbjct: 439 RINDNAYKLDLPGEYNVIATFNVSDLSPFDVGEDSRT 475
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 330 bits (845), Expect = 3e-88
Identities = 156/217 (71%), Positives = 177/217 (81%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLS FW+VLW KLGTKLLFSTTCHPQTDGQ EVVNRTLS LLRT+IQKNLKNWEDCL
Sbjct: 925 DVKFLSCFWKVLWGKLGTKLLFSTTCHPQTDGQIEVVNRTLSTLLRTIIQKNLKNWEDCL 984
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
PF EFAYNRSVHS T+F+PFE+VYGFNPL+PLDL+P+PV E SLD
Sbjct: 985 PFTEFAYNRSVHSTTSFSPFEIVYGFNPLTPLDLLPLPVNEMTSLD-------------- 1030
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
EK+ E+YV +ANKGR+QV+FE GDWVW+H+RKERFPT+R+SKL P GDGPFQV+
Sbjct: 1031 -----EKKNEQYVTKANKGRRQVLFESGDWVWVHMRKERFPTRRQSKLHPRGDGPFQVLE 1085
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDSRT 653
+INDNAYK+DL GEYN+SATF VSDLSPFN DSRT
Sbjct: 1086 RINDNAYKLDLLGEYNISATFKVSDLSPFNVGDDSRT 1122
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 308 bits (790), Expect = 7e-82
Identities = 147/216 (68%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
DAKFLSHFWR LW K+GTKLLFSTTCHPQTDGQTEVVN+TL LLRT+++KNLK+WE CL
Sbjct: 389 DAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNKTLGTLLRTVLKKNLKSWEACL 448
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIP-VEEQASLDGXXXXXXXXXXXX 359
P VEFAYNR+VHS TN +PFE+VYGFNPL+PLDL+P+P + D
Sbjct: 449 PHVEFAYNRTVHSTTNCSPFEIVYGFNPLTPLDLLPMPNITMFKHKDAQAKAEYVKKLHE 508
Query: 360 XXXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVI 539
IEK+ Y +QANK RK+V+ EPGDWVW+HL+KERFP RKSKLQP GDGPFQV+
Sbjct: 509 QVKAQIEKKNASYARQANKSRKKVVLEPGDWVWVHLKKERFPEHRKSKLQPRGDGPFQVL 568
Query: 540 AKINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDS 647
KINDNAYKIDLP EYNVSATFNVSDLS F+A+ S
Sbjct: 569 EKINDNAYKIDLPNEYNVSATFNVSDLSLFDADGGS 604
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 305 bits (781), Expect = 8e-81
Identities = 140/217 (64%), Positives = 174/217 (80%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
DAKFLSHFWR+LW KLGTKLL+ST CHPQTDGQTEVVNRTL+QLLR +I+KNLK+WE+ L
Sbjct: 1056 DAKFLSHFWRILWGKLGTKLLYSTACHPQTDGQTEVVNRTLTQLLRVVIRKNLKSWEESL 1115
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P+VEFAYNR++HS TN +PFEV YGFNPL+PLDL+P+ V ++ +D
Sbjct: 1116 PYVEFAYNRAIHSTTNMSPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKKAQGIREFHSK 1175
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
IEK+ E+Y ++ANKGRK +IF+PGDWVW+H K RFP +RKSKL P GDGPFQV+
Sbjct: 1176 VRAQIEKKNEQYAQKANKGRKAIIFKPGDWVWIHYSKNRFPNQRKSKLMPRGDGPFQVLE 1235
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDSRT 653
+INDNAYK+DL GE++VS+TFNV+DL+PF+ SDS T
Sbjct: 1236 RINDNAYKLDLRGEHSVSSTFNVADLAPFDF-SDSGT 1271
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 300 bits (769), Expect = 2e-79
Identities = 140/217 (64%), Positives = 171/217 (78%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLS+FW+ LW+KLGT+LLFSTTCHPQTDGQTEVVNRTLS LLR LI+KNLK WE+CL
Sbjct: 1336 DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECL 1395
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNR+VHS TN PFEVVYGF PLSP+DL+P+P++E++ ++
Sbjct: 1396 PHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEK 1455
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
IEK+++ Y ANK RK+V FEPGD VW+HLRK+RFP KRKSKL P GDGPF+V++
Sbjct: 1456 TKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLS 1515
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDSRT 653
KINDNAYKI+LP +Y VS+TFNV+DL+PF DS +
Sbjct: 1516 KINDNAYKIELPEDYGVSSTFNVADLTPFFGLEDSES 1552
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 300 bits (769), Expect = 2e-79
Identities = 140/217 (64%), Positives = 171/217 (78%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLS+FW+ LW+KLGT+LLFSTTCHPQTDGQTEVVNRTLS LLR LI+KNLK WE+CL
Sbjct: 304 DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECL 363
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNR+VHS TN PFEVVYGF PLSP+DL+P+P++E++ ++
Sbjct: 364 PHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEK 423
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
IEK+++ Y ANK RK+V FEPGD VW+HLRK+RFP KRKSKL P GDGPF+V++
Sbjct: 424 TKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLS 483
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDSRT 653
KINDNAYKI+LP +Y VS+TFNV+DL+PF DS +
Sbjct: 484 KINDNAYKIELPEDYGVSSTFNVADLTPFFGLEDSES 520
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 298 bits (763), Expect = 9e-79
Identities = 139/217 (64%), Positives = 170/217 (78%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLS+FW+ LW+KLGT+LLFSTTCHPQTDGQTEVVNRTLS LLR LI+KNLK WE+CL
Sbjct: 304 DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECL 363
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNR+VHS TN PFEVVYGF PL+P+DL+P+P++E++ ++
Sbjct: 364 PHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDLLPLPLQERSDMEASKHATYVKKIHEK 423
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
IEK+++ Y ANK RK+V FEPGD VW+HLRK+RFP KRKSKL P GDGPF+V++
Sbjct: 424 TKEAIEKRSKYYAAWANKDRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLS 483
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDSRT 653
KINDNAYKI+LP +Y VS TFNV+DL+PF DS +
Sbjct: 484 KINDNAYKIELPEDYGVSPTFNVADLTPFFGLEDSES 520
>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1096
Score = 297 bits (761), Expect = 2e-78
Identities = 139/217 (64%), Positives = 170/217 (78%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
DAKFLSHFWR+LW KLGTKLLFST+CHPQTDGQTEVVNRTL +LR +++ L +WED L
Sbjct: 794 DAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYL 853
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNR+ HS+T TPFEVVYGFNPL+PLDL+P+P + A+LDG
Sbjct: 854 PIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQ 913
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
L IEK+ + + NKGRK VIF+PGD VW+H+RKERFP+KRK+KL P G GP++V+
Sbjct: 914 TRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLE 973
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDSRT 653
+I DNAYK+DLPGE+ VSATFNVSDLS ++A+ DSRT
Sbjct: 974 RIGDNAYKLDLPGEFQVSATFNVSDLSHYDADLDSRT 1010
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 297 bits (761), Expect = 2e-78
Identities = 139/217 (64%), Positives = 170/217 (78%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
DAKFLSHFWR+LW KLGTKLLFST+CHPQTDGQTEVVNRTL +LR +++ L +WED L
Sbjct: 1286 DAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYL 1345
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNR+ HS+T TPFEVVYGFNPL+PLDL+P+P + A+LDG
Sbjct: 1346 PIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQ 1405
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
L IEK+ + + NKGRK VIF+PGD VW+H+RKERFP+KRK+KL P G GP++V+
Sbjct: 1406 TRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLE 1465
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDSRT 653
+I DNAYK+DLPGE+ VSATFNVSDLS ++A+ DSRT
Sbjct: 1466 RIGDNAYKLDLPGEFQVSATFNVSDLSHYDADLDSRT 1502
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 297 bits (761), Expect = 2e-78
Identities = 139/217 (64%), Positives = 170/217 (78%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
DAKFLSHFWR+LW KLGTKLLFST+CHPQTDGQTEVVNRTL +LR +++ L +WED L
Sbjct: 1286 DAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYL 1345
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNR+ HS+T TPFEVVYGFNPL+PLDL+P+P + A+LDG
Sbjct: 1346 PIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQ 1405
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
L IEK+ + + NKGRK VIF+PGD VW+H+RKERFP+KRK+KL P G GP++V+
Sbjct: 1406 TRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLE 1465
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESDSRT 653
+I DNAYK+DLPGE+ VSATFNVSDLS ++A+ DSRT
Sbjct: 1466 RIGDNAYKLDLPGEFQVSATFNVSDLSHYDADLDSRT 1502
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 297 bits (760), Expect = 2e-78
Identities = 139/213 (65%), Positives = 169/213 (79%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLS+FW+ LWSKLGTKLLFSTTCHPQTDGQTEVVNRTLS LLR LI+KNLK WEDCL
Sbjct: 1524 DTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCL 1583
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYN S+HSA+ F+PF++VYGFNP +PLDL+P+P+ E+ SLDG
Sbjct: 1584 PHVEFAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQ 1643
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
NIE++T++Y K ANK RK+VIF GD VW+HLRKERFP +RKSKL DGPF+V+
Sbjct: 1644 AKKNIEEKTKQYAKHANKSRKEVIFNEGDLVWIHLRKERFPKERKSKLMSRIDGPFKVLK 1703
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAES 641
+IN+NAY +DL G+YNVS +FNV+DL PF A++
Sbjct: 1704 RINNNAYSLDLQGKYNVSNSFNVADLFPFIADN 1736
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 293 bits (749), Expect = 4e-77
Identities = 138/219 (63%), Positives = 169/219 (77%), Gaps = 2/219 (0%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KF+S+FW+ LW+KLGTKLLFSTTCH Q DGQ EVVNRTLS LLR +I+KNLK WEDCL
Sbjct: 935 DVKFMSYFWKTLWAKLGTKLLFSTTCHSQIDGQMEVVNRTLSMLLRMMIKKNLKEWEDCL 994
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNR VHS T +PFEVVYGFNP++PLDL+P+P++E+A+++
Sbjct: 995 PHVEFAYNRVVHSTTQLSPFEVVYGFNPITPLDLLPLPLQERANMEATKRADYVKKMHEK 1054
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
IE+ + Y +ANK RK+++F+PG+ VW+HLRK+RFP KRKSKL P GDGPF+V+
Sbjct: 1055 TKETIERIIQSYAAKANKDRKKMLFQPGELVWVHLRKDRFPEKRKSKLMPHGDGPFRVLE 1114
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPF--NAESDSRT 653
KI DNAYKIDLPG+Y VS TFNV DLSPF E+DSRT
Sbjct: 1115 KITDNAYKIDLPGDYTVSNTFNVVDLSPFFGTEETDSRT 1153
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 283 bits (724), Expect = 3e-74
Identities = 132/220 (60%), Positives = 163/220 (74%), Gaps = 3/220 (1%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
DAKFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++KN+K WEDCL
Sbjct: 1336 DAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCL 1395
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P +EFAYNRS+HS T PF++VYG P +P+DL+P+P E+ + D
Sbjct: 1396 PHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHET 1455
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
NIE+ RY ++KGRK++ FEPGD VWLHLRKERFP RKSKL P DGPF+V+
Sbjct: 1456 TKENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLE 1515
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPF---NAESDSRT 653
KINDNAY++DLP ++ VS TFN++DL P+ E +SRT
Sbjct: 1516 KINDNAYRLDLPADFGVSPTFNIADLKPYLGEEVELESRT 1555
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 282 bits (721), Expect = 7e-74
Identities = 129/214 (60%), Positives = 159/214 (74%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++KN+K WE+CL
Sbjct: 1333 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1392
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P +EFAYNRS+HS T PF++VYG P +P+DL+P+P E+ + D
Sbjct: 1393 PHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHET 1452
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
NIE+ +Y +KGR+++ FEPGD VWLHLRKERFP RKSKL P DGPF+V+A
Sbjct: 1453 TKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLA 1512
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESD 644
KIN+NAYKIDLP ++ VS TFNV+DL P+ E D
Sbjct: 1513 KINENAYKIDLPADFGVSPTFNVADLKPYLGEED 1546
Score = 114 bits (286), Expect = 2e-23
Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
+++F SHFW+ L +LGT+L FST HPQTDGQTE +N+ L +L + K W+ L
Sbjct: 2155 ESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFGKTWDKSL 2214
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPL--DLVPIPVEEQASLDGXXXXXXXXXXX 356
P+ EF+YN S ++ P+E +YG +PL D V ++ + G
Sbjct: 2215 PYAEFSYNNSYQASIQMAPYEALYGRKCRTPLLWDQV-----GESQVFGTDILREAEAKV 2269
Query: 357 XXXXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRK----ERFPTKRKSKLQPIGDG 524
N++ R A+ R+ + F D+V+L + RF T K KL P G
Sbjct: 2270 RTIWDNLKVAQSRQKSYADNRRRNLEFAVDDFVYLRVTPLRGVHRFQT--KGKLAPRFVG 2327
Query: 525 PFQVIAKINDNAYKIDLPGEY-NVSATFNVSDL 620
PF++IA+ + AY+++LP NV F+VS L
Sbjct: 2328 PFRIIARRGEVAYQLELPASLGNVHDVFHVSQL 2360
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 278 bits (711), Expect = 1e-72
Identities = 127/214 (59%), Positives = 157/214 (73%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
DAKFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNR+LS +LR +++ N+K WE+CL
Sbjct: 1392 DAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEECL 1451
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P +EFAYNRS+HS T PFE+VYGF P +P+DL+PIP E+ + D
Sbjct: 1452 PHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHEL 1511
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
NIE+ RY +KGRK V+F PGD VWLHLRK+RFP RKSKL P GPF+V+
Sbjct: 1512 TKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLE 1571
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESD 644
KINDNAY+++LP ++ VS TFN++DL P+ E D
Sbjct: 1572 KINDNAYRLELPADFGVSPTFNIADLKPYLGEED 1605
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 278 bits (711), Expect = 1e-72
Identities = 128/214 (59%), Positives = 157/214 (73%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
DAKFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNR+LS +LR +++ NLK WE+CL
Sbjct: 1389 DAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECL 1448
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P +EFAYNRS+HS T PFE+VYGF P +P+DL+PIP E+ + D
Sbjct: 1449 PHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHEL 1508
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
NIE+ RY +KGRK V+F PGD VWLHLRK+RFP RKSKL P GPF+V+
Sbjct: 1509 TKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLE 1568
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESD 644
KINDNAY+++LP ++ VS TFN++DL P+ E D
Sbjct: 1569 KINDNAYRLELPXDFGVSPTFNIADLKPYLGEED 1602
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 278 bits (710), Expect = 1e-72
Identities = 128/214 (59%), Positives = 156/214 (72%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++KN+K WE+CL
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1420
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNRS HS T PFE+VYG P +P+DL+P+P E+ + D
Sbjct: 1421 PHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELMLKLHET 1480
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
NIE+ +Y +KG+K V FEPGD VWLHLRK+RFP RKSKL P DGPF+V+
Sbjct: 1481 TKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQ 1540
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESD 644
KINDNAYK++LP ++ VS TFN++DL P+ E D
Sbjct: 1541 KINDNAYKLELPADFGVSPTFNIADLKPYLGEED 1574
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 277 bits (709), Expect = 2e-72
Identities = 128/214 (59%), Positives = 156/214 (72%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRT+S +LR +++KN+K WE+CL
Sbjct: 1257 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEECL 1316
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNRS HS T PFE+VYG P +P+DL+P+P E+ + D
Sbjct: 1317 PHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTLERVNFDAKYRAELMLKLHET 1376
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
NIE+ +Y +KG+K V FEPGD VWLHLRK+RFP RKSKL P DGPFQV+
Sbjct: 1377 TKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLPPRADGPFQVLQ 1436
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESD 644
KINDNAYK++LP ++ VS TFN++DL P+ E D
Sbjct: 1437 KINDNAYKLELPADFGVSPTFNIADLKPYLGEED 1470
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 277 bits (708), Expect = 2e-72
Identities = 126/214 (58%), Positives = 155/214 (72%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLSHFWR LW+KLG KLLFSTTCHPQTDGQTEVVNRTLS +LR +++ N K WE+CL
Sbjct: 1377 DTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECL 1436
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P +EFAYNRS+HS T PFE+VYGF P +P+DL+P+P E+ + D
Sbjct: 1437 PHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHEL 1496
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
NIE+ +Y +KGRK V+F PGD VWLHLRK+RFP RKSKL P DGPF+V+
Sbjct: 1497 TKENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLE 1556
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESD 644
KINDNAYK++LP ++ VS TFN++DL P+ E D
Sbjct: 1557 KINDNAYKLELPADFGVSPTFNIADLKPYLGEED 1590
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 276 bits (706), Expect = 4e-72
Identities = 127/214 (59%), Positives = 155/214 (72%)
Frame = +3
Query: 3 DAKFLSHFWRVLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLIQKNLKNWEDCL 182
D KFLSHFWR LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++KN+K WE+CL
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1420
Query: 183 PFVEFAYNRSVHSATNFTPFEVVYGFNPLSPLDLVPIPVEEQASLDGXXXXXXXXXXXXX 362
P VEFAYNRS HS T PFE+VYG P +P+DL+P+P E+ + D
Sbjct: 1421 PHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYHAELMLKLHET 1480
Query: 363 XXLNIEKQTERYVKQANKGRKQVIFEPGDWVWLHLRKERFPTKRKSKLQPIGDGPFQVIA 542
NIE+ +Y +KG+K V FEPGD VWLHLRK+RFP RKSKL P DGPF+V+
Sbjct: 1481 TKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQ 1540
Query: 543 KINDNAYKIDLPGEYNVSATFNVSDLSPFNAESD 644
KINDN YK++LP ++ VS TFN++DL P+ E D
Sbjct: 1541 KINDNTYKLELPADFGVSPTFNIADLKPYLGEED 1574