BLASTX nr result
ID: Rehmannia26_contig00028970
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00028970
(532 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACB28472.1| polyprotein [Ananas comosus] 152 5e-35
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 151 8e-35
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 150 2e-34
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 149 3e-34
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 149 3e-34
ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610... 148 7e-34
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 148 7e-34
ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827... 148 9e-34
emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera] 145 4e-33
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera] 145 4e-33
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 145 6e-33
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera] 145 7e-33
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera] 144 2e-32
gb|AAX96125.1| retrotransposon protein, putative, unclassified [... 143 2e-32
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 143 3e-32
gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japo... 142 4e-32
dbj|BAG72147.1| hypothetical protein [Lotus japonicus] gi|208609... 141 8e-32
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e... 141 1e-31
gb|AAS07071.1| putative integrase, 3'-partial [Oryza sativa Japo... 140 1e-31
gb|AAP44617.1| putative polyprotein [Oryza sativa Japonica Group... 140 1e-31
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 152 bits (384), Expect = 5e-35
Identities = 68/99 (68%), Positives = 83/99 (83%)
Frame = -2
Query: 531 SKVAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTE 352
S VAQ+FLD+IYKLHG P SIV+DRD IF S FW+ELFK +QV ++L++AYHPQSDGQTE
Sbjct: 820 SSVAQLFLDNIYKLHGMPRSIVSDRDTIFVSQFWQELFKRLQVKVNLSTAYHPQSDGQTE 879
Query: 351 RLNQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTN 235
+N+CLENYLRCM PK+W KWL LAE WYNT+YH++
Sbjct: 880 VVNRCLENYLRCMAGERPKEWAKWLPLAEWWYNTSYHSS 918
>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 151 bits (382), Expect = 8e-35
Identities = 66/97 (68%), Positives = 79/97 (81%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VAQ FLD++YK HG P SIV+DRD +FTS FW+E FKL V L ++SAYHPQSDGQTE +
Sbjct: 1169 VAQAFLDNVYKHHGCPTSIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDGQTEVV 1228
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTN 235
N+CLENYLRCM H P W+KWL LAE+WYNTNYH++
Sbjct: 1229 NRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYHSS 1265
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 150 bits (379), Expect = 2e-34
Identities = 65/99 (65%), Positives = 83/99 (83%)
Frame = -2
Query: 528 KVAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTER 349
+V QVF+D+I+KLHG PI+IVTDRD++FTSTF++E+FK +V L ++AYHPQ+DGQTER
Sbjct: 651 EVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTER 710
Query: 348 LNQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
+NQCLE+YLRCMT P+ W W+ALAE WYNT YHT I
Sbjct: 711 VNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAI 749
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 149 bits (377), Expect = 3e-34
Identities = 60/100 (60%), Positives = 84/100 (84%)
Frame = -2
Query: 531 SKVAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTE 352
+KVA+VFLD++YKLHG P++I++DRD+IFTS+FW++LF++ NL ++S+YHPQSDGQTE
Sbjct: 1237 AKVARVFLDNVYKLHGLPVNIISDRDRIFTSSFWQQLFQITGTNLSMSSSYHPQSDGQTE 1296
Query: 351 RLNQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
RLNQCLE +LRC H P +W WL++AE+WYNT H+ +
Sbjct: 1297 RLNQCLETFLRCYVHTCPSRWSAWLSVAEYWYNTTVHSTL 1336
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 149 bits (377), Expect = 3e-34
Identities = 66/97 (68%), Positives = 78/97 (80%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VA +LD+++KLHG P SIV+DRD +FTS FWRE F L V L LTSAYHPQSDGQTE +
Sbjct: 1198 VAHAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVV 1257
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTN 235
N+CLE YLRCM H P+ W KWLALAE+WYNTNYH++
Sbjct: 1258 NRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSS 1294
>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
Length = 1274
Score = 148 bits (374), Expect = 7e-34
Identities = 65/95 (68%), Positives = 80/95 (84%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VAQ+FLD++YKLHG P SIV+DRDK+FTSTFW+ LF L+ VNL +++AYHPQ+DGQTE +
Sbjct: 1021 VAQLFLDNVYKLHGLPNSIVSDRDKVFTSTFWQSLFSLLNVNLLMSTAYHPQTDGQTEVV 1080
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYH 241
N+CLE YLRCM PK+W KWL LAE WYNT+YH
Sbjct: 1081 NKCLEQYLRCMVGDRPKEWVKWLPLAEWWYNTSYH 1115
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 148 bits (374), Expect = 7e-34
Identities = 64/96 (66%), Positives = 79/96 (82%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VAQ F+D+I+KLHG PI+IV+DRD+IFTS W+ELFK M+V L ++AYHPQ+DGQTER+
Sbjct: 1033 VAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERV 1092
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHT 238
NQC+E+YLRCM PKKW WL LAE WYNT +HT
Sbjct: 1093 NQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHT 1128
>ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827899 [Brachypodium
distachyon]
Length = 1665
Score = 148 bits (373), Expect = 9e-34
Identities = 60/96 (62%), Positives = 80/96 (83%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VAQ+FLD++Y+LHG P I++DRDK+F S+FW++LFKL L+L+S+YHPQ+DGQTERL
Sbjct: 1341 VAQLFLDNVYRLHGLPKIIISDRDKVFISSFWQQLFKLADTTLNLSSSYHPQTDGQTERL 1400
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHT 238
NQCLE YLRC+ H P +W +WL AE+WYNTN+H+
Sbjct: 1401 NQCLETYLRCLVHAKPNRWARWLPQAEYWYNTNFHS 1436
>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
Length = 672
Score = 145 bits (367), Expect = 4e-33
Identities = 63/98 (64%), Positives = 79/98 (80%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VAQVFLDS+YKLHG P SI DRD IFTS FW+E FKL V+L L++AYHPQ+DGQTE +
Sbjct: 299 VAQVFLDSVYKLHGLPYSITCDRDPIFTSVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVV 358
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
N+C+E YLRCM NP +W W++LAE WYNT+YH+++
Sbjct: 359 NRCIETYLRCMAGDNPGQWANWISLAEFWYNTSYHSSL 396
>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
Length = 1371
Score = 145 bits (367), Expect = 4e-33
Identities = 63/98 (64%), Positives = 79/98 (80%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VAQVFLDS+YKLHG P SI DRD IFTS FW+E FKL V+L L++AYHPQ+DGQTE +
Sbjct: 1161 VAQVFLDSVYKLHGLPYSITCDRDPIFTSVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVV 1220
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
N+C+E YLRCM NP +W W++LAE WYNT+YH+++
Sbjct: 1221 NRCIETYLRCMAGDNPGQWANWISLAEFWYNTSYHSSL 1258
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 145 bits (366), Expect = 6e-33
Identities = 62/99 (62%), Positives = 82/99 (82%)
Frame = -2
Query: 528 KVAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTER 349
+V Q+F+D+I+KLHG P+ IVTDRD++FTS F++E+FK +V L ++A+HPQ+DGQTER
Sbjct: 1307 QVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTER 1366
Query: 348 LNQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
+NQCLE+YLR MT P+KW WLALAE WYNT YHT+I
Sbjct: 1367 VNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSI 1405
>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 145 bits (365), Expect = 7e-33
Identities = 63/98 (64%), Positives = 79/98 (80%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VAQVFLDS+YKLHG P SI DRD IFTS FW+E FKL V+L L++AYHPQ+DGQTE +
Sbjct: 1136 VAQVFLDSVYKLHGLPHSITCDRDPIFTSVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVV 1195
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
N+C+E YLRCM NP +W W++LAE WYNT+YH+++
Sbjct: 1196 NRCIETYLRCMVGDNPGQWANWISLAEFWYNTSYHSSL 1233
>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
Length = 1378
Score = 144 bits (362), Expect = 2e-32
Identities = 62/98 (63%), Positives = 79/98 (80%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VAQVFLDS+YKLHG P SI DRD IFT+ FW+E FKL V+L L++AYHPQ+DGQTE +
Sbjct: 1105 VAQVFLDSVYKLHGLPHSITCDRDPIFTNVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVV 1164
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
N+C+E YLRCM NP +W W++LAE WYNT+YH+++
Sbjct: 1165 NRCIETYLRCMAGDNPGQWANWISLAEFWYNTSYHSSL 1202
>gb|AAX96125.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77550700|gb|ABA93497.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1448
Score = 143 bits (361), Expect = 2e-32
Identities = 57/98 (58%), Positives = 78/98 (79%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
VAQ++++ ++KLHG P+++V+D DKIFTS FW +LF+ + L +++AYHPQ+DGQTER+
Sbjct: 1081 VAQLYMEGVFKLHGLPLAVVSDHDKIFTSNFWEQLFQSVSTKLHMSTAYHPQTDGQTERV 1140
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
NQCLE YLRC TH P KW WL LAE+WYNT YH+ +
Sbjct: 1141 NQCLETYLRCFTHSCPSKWSTWLYLAEYWYNTTYHSTL 1178
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 143 bits (360), Expect = 3e-32
Identities = 59/99 (59%), Positives = 83/99 (83%)
Frame = -2
Query: 528 KVAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTER 349
+V ++F+++I++LHG P++I+TDRD+IFTS ++E+FK M+V L +++YHPQ+DGQTER
Sbjct: 1282 QVVELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTER 1341
Query: 348 LNQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
+NQCLE+YLR MT P +WH WLALAE WYNT YHT+I
Sbjct: 1342 VNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSI 1380
>gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japonica Group]
gi|31433481|gb|AAP54986.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1409
Score = 142 bits (359), Expect = 4e-32
Identities = 60/99 (60%), Positives = 82/99 (82%)
Frame = -2
Query: 528 KVAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTER 349
+V +VF+D+I+KLHG P++I+TDRD+IFTS ++E+FK M+V L ++AYHPQ+DGQTER
Sbjct: 1203 QVVEVFMDNIHKLHGMPMAIITDRDRIFTSQLFQEVFKAMKVQLRFSTAYHPQTDGQTER 1262
Query: 348 LNQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
+NQCLE+YLR M P +W+ WLALAE WYNT YHT++
Sbjct: 1263 VNQCLESYLRSMAFQEPHQWYSWLALAEWWYNTTYHTSL 1301
>dbj|BAG72147.1| hypothetical protein [Lotus japonicus] gi|208609053|dbj|BAG72149.1|
hypothetical protein [Lotus japonicus]
Length = 1520
Score = 141 bits (356), Expect = 8e-32
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 528 KVAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTER 349
++A+VF+ + KLHG P SIV+DRD++F STFW E+FKL L +SAYHPQ+DGQTE
Sbjct: 1179 EIAEVFIKEVVKLHGFPTSIVSDRDRVFLSTFWSEMFKLAGTKLKFSSAYHPQTDGQTEV 1238
Query: 348 LNQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNIMT 226
+N+C+E YLRC+T PK+W KWL+ AE WYNTNYH+ I T
Sbjct: 1239 VNRCVETYLRCVTGSKPKQWPKWLSWAEFWYNTNYHSAIKT 1279
>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 335
Score = 141 bits (355), Expect = 1e-31
Identities = 62/98 (63%), Positives = 80/98 (81%)
Frame = -2
Query: 525 VAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTERL 346
V QVF+D+I KLHG PI+IVTDRD+IFTS ++E+FK+++V L L++AYHPQ+D QTER+
Sbjct: 48 VVQVFMDNILKLHGMPITIVTDRDRIFTSHLFQEIFKMLKVTLRLSTAYHPQTDRQTERV 107
Query: 345 NQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
NQCLE YLR MT P++W WL LAE WYNT YHT++
Sbjct: 108 NQCLEAYLRSMTFQEPREWMNWLTLAEWWYNTTYHTSL 145
>gb|AAS07071.1| putative integrase, 3'-partial [Oryza sativa Japonica Group]
Length = 303
Score = 140 bits (354), Expect = 1e-31
Identities = 60/99 (60%), Positives = 85/99 (85%)
Frame = -2
Query: 528 KVAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTER 349
+V +VF+++I+KL+G P++IVTDRD+IFTS F++E+FK M+V+L ++AYHPQ+DGQT+R
Sbjct: 47 QVVEVFMNNIHKLYGMPMAIVTDRDRIFTSQFFQEVFKAMKVHLRFSTAYHPQTDGQTKR 106
Query: 348 LNQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
+NQCLE+YLR MT P+ W+ WLALAE WYNT YHT++
Sbjct: 107 VNQCLESYLRNMTFKEPQHWYSWLALAEWWYNTTYHTSL 145
>gb|AAP44617.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708833|gb|ABF96628.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 627
Score = 140 bits (354), Expect = 1e-31
Identities = 60/99 (60%), Positives = 85/99 (85%)
Frame = -2
Query: 528 KVAQVFLDSIYKLHGHPISIVTDRDKIFTSTFWRELFKLMQVNLDLTSAYHPQSDGQTER 349
+V +VF+++I+KL+G P++IVTDRD+IFTS F++E+FK M+V+L ++AYHPQ+DGQT+R
Sbjct: 47 QVVEVFMNNIHKLYGMPMAIVTDRDRIFTSQFFQEVFKAMKVHLRFSTAYHPQTDGQTKR 106
Query: 348 LNQCLENYLRCMTHMNPKKWHKWLALAEHWYNTNYHTNI 232
+NQCLE+YLR MT P+ W+ WLALAE WYNT YHT++
Sbjct: 107 VNQCLESYLRNMTFKEPQHWYSWLALAEWWYNTTYHTSL 145