BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00027990
         (704 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ...   329   6e-88
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   327   3e-87
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              327   3e-87
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe...   325   9e-87
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...   325   1e-86
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]           323   3e-86
ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   322   1e-85
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]           321   2e-85
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        320   2e-85
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   320   2e-85
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   319   6e-85
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr...   318   8e-85
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   318   8e-85
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   318   1e-84
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   317   2e-84
ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citr...   317   2e-84
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab...   317   3e-84
ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Caps...   316   4e-84
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   314   2e-83
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   312   6e-83

>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score =  329 bits (843), Expect = 6e-88
 Identities = 158/192 (82%), Positives = 171/192 (89%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEGLICAPL+K+LLDDG+TERVILA N GLEA+QEAITEYRVLGP INGCSWIELRP 
Sbjct: 282 KEKEGLICAPLSKILLDDGKTERVILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPL 341

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPTTG+PYKLRRPEGLDVQ
Sbjct: 342 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQ 401

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSVLSKVPLLHLHCRE+VLPN+AKF+ + N+      + P    KPD+LRFVA MP HM
Sbjct: 402 KGSVLSKVPLLHLHCRELVLPNIAKFLPVLNK--NTETLPPALSMKPDLLRFVATMPKHM 459

Query: 541 KISWNLMSSYLV 576
           KISWNLMSSYLV
Sbjct: 460 KISWNLMSSYLV 471


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  327 bits (837), Expect = 3e-87
 Identities = 157/192 (81%), Positives = 172/192 (89%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           KQKEG+I APL+KVLLDDG+TERVILAN SGLEA+QEAITEYRVLGP INGCSWIEL P 
Sbjct: 288 KQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPR 347

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPTTG+PYK+RRPEGLDVQ
Sbjct: 348 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQ 407

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSVLSKVPLLHLHCRE++LPN+AKF+ + +    N +  P+   KPDILRFVA MP+HM
Sbjct: 408 KGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHM 467

Query: 541 KISWNLMSSYLV 576
           KISWNLMSSYLV
Sbjct: 468 KISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  327 bits (837), Expect = 3e-87
 Identities = 157/192 (81%), Positives = 172/192 (89%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           KQKEG+I APL+KVLLDDG+TERVILAN SGLEA+QEAITEYRVLGP INGCSWIEL P 
Sbjct: 290 KQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPR 349

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPTTG+PYK+RRPEGLDVQ
Sbjct: 350 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQ 409

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSVLSKVPLLHLHCRE++LPN+AKF+ + +    N +  P+   KPDILRFVA MP+HM
Sbjct: 410 KGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHM 469

Query: 541 KISWNLMSSYLV 576
           KISWNLMSSYLV
Sbjct: 470 KISWNLMSSYLV 481


>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  325 bits (833), Expect = 9e-87
 Identities = 157/192 (81%), Positives = 173/192 (90%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEGLICAPL+KVLLD+G+TERVILA+ SGLEA+Q+AIT+YRVLGPTINGCSWIELRP 
Sbjct: 282 KEKEGLICAPLSKVLLDNGKTERVILAHQSGLEASQKAITQYRVLGPTINGCSWIELRPL 341

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP VD EPT+G PYKLRRP GLDVQ
Sbjct: 342 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHVDVEPTSGLPYKLRRPAGLDVQ 401

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSVLSKVPLLHLHCRE+VLPN+AKF+ + ++   + H  P   SKPDILRFVA MPSHM
Sbjct: 402 KGSVLSKVPLLHLHCRELVLPNIAKFLLILDQKLDSLH--PAVSSKPDILRFVASMPSHM 459

Query: 541 KISWNLMSSYLV 576
           KISWNLMSSYLV
Sbjct: 460 KISWNLMSSYLV 471


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
           PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like isoform X3
           [Solanum tuberosum]
          Length = 475

 Score =  325 bits (832), Expect = 1e-86
 Identities = 153/192 (79%), Positives = 172/192 (89%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEG+I APLTKVLLDDG TERV+LA  SGLEA+ EA+TEYR+LGP INGCSWIELRPH
Sbjct: 287 KEKEGVISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRPH 346

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQ+RVHCAEALGTPIVGDYKYGWFVH +WKQMPRVD EPTTG+PY+L+RPEGLDVQ
Sbjct: 347 TSRKHQIRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQ 406

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSVLSKVPLLHLHCRE+VLPN+AKFIELH+R    +    ++ SKPD+LRFVAPMPS M
Sbjct: 407 KGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKTKKH---SDYSSKPDLLRFVAPMPSPM 463

Query: 541 KISWNLMSSYLV 576
           KISW LMSS L+
Sbjct: 464 KISWKLMSSCLI 475


>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  323 bits (828), Expect = 3e-86
 Identities = 153/192 (79%), Positives = 174/192 (90%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEG+ICAPL+KVLL+DG+TERVILA+ +G +A+QEAITEYRVLGP INGCSW+ELRP 
Sbjct: 260 KEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAITEYRVLGPMINGCSWLELRPL 319

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+V+ EPTTG+PYKLRRPEGLDVQ
Sbjct: 320 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVNIEPTTGKPYKLRRPEGLDVQ 379

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSV+SKVPLLHL CRE+VLPN+AKF+ + +R   N   DP  +SKPD+LRFVA MPSHM
Sbjct: 380 KGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSQNQ--DPALESKPDLLRFVARMPSHM 437

Query: 541 KISWNLMSSYLV 576
           KISWNLMSSYLV
Sbjct: 438 KISWNLMSSYLV 449


>ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Solanum
           lycopersicum]
          Length = 475

 Score =  322 bits (824), Expect = 1e-85
 Identities = 153/192 (79%), Positives = 170/192 (88%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K KEG+I APLTKVLLDDG TERV+LA  SGLEA+ EA+TEYR+LGP INGCSWIELRPH
Sbjct: 287 KVKEGVISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRPH 346

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH +WKQMPRVD EP TG+PY+L+RPEGLDVQ
Sbjct: 347 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVDVEPITGKPYRLKRPEGLDVQ 406

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSVLSKVPLLHLHCRE+VLPN+AKFIELH+R       + ++ SKPD+LRFVAPMPS M
Sbjct: 407 KGSVLSKVPLLHLHCRELVLPNIAKFIELHSR---KTRKNTDYSSKPDLLRFVAPMPSPM 463

Query: 541 KISWNLMSSYLV 576
           KISW LMSS L+
Sbjct: 464 KISWKLMSSCLI 475


>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  321 bits (822), Expect = 2e-85
 Identities = 152/192 (79%), Positives = 173/192 (90%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEG+ICAPL+KVLL+DG+TERVILA+ +G +A+QEAITEYRVLGP INGCSW+ELRP 
Sbjct: 260 KEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAITEYRVLGPMINGCSWLELRPL 319

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGW VH RWKQMP+V+ EPTTG+PYKLRRPEGLDVQ
Sbjct: 320 TSRKHQLRVHCAEALGTPIVGDYKYGWLVHKRWKQMPQVNIEPTTGKPYKLRRPEGLDVQ 379

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSV+SKVPLLHL CRE+VLPN+AKF+ + +R   N   DP  +SKPD+LRFVA MPSHM
Sbjct: 380 KGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSENQ--DPALESKPDLLRFVARMPSHM 437

Query: 541 KISWNLMSSYLV 576
           KISWNLMSSYLV
Sbjct: 438 KISWNLMSSYLV 449


>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  320 bits (821), Expect = 2e-85
 Identities = 154/195 (78%), Positives = 171/195 (87%), Gaps = 3/195 (1%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEGLI APL+KVLLDDG+T+RV+LA  SG EA+Q+AITEY+VLGP INGCSW+ELRP 
Sbjct: 136 KEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPI 195

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+VD EPTTG+PYKLRRPEGLDVQ
Sbjct: 196 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQ 255

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHD---SKPDILRFVAPMP 531
           KGSVLSKVPLLHLHCREMVLPN+AKF+ + N+       +P H     KPD+LRFVA MP
Sbjct: 256 KGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQ----QETEPLHTGIIDKPDLLRFVASMP 311

Query: 532 SHMKISWNLMSSYLV 576
           SHMKISWNLMSSYLV
Sbjct: 312 SHMKISWNLMSSYLV 326


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudouridine synthase 3, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 3; AltName:
           Full=RNA-uridine isomerase 3; Flags: Precursor
           gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
           thaliana] gi|56790228|gb|AAW30031.1| At1g78910
           [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
           pseudourine synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  320 bits (821), Expect = 2e-85
 Identities = 154/195 (78%), Positives = 171/195 (87%), Gaps = 3/195 (1%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEGLI APL+KVLLDDG+T+RV+LA  SG EA+Q+AITEY+VLGP INGCSW+ELRP 
Sbjct: 288 KEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPI 347

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+VD EPTTG+PYKLRRPEGLDVQ
Sbjct: 348 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQ 407

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHD---SKPDILRFVAPMP 531
           KGSVLSKVPLLHLHCREMVLPN+AKF+ + N+       +P H     KPD+LRFVA MP
Sbjct: 408 KGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQ----QETEPLHTGIIDKPDLLRFVASMP 463

Query: 532 SHMKISWNLMSSYLV 576
           SHMKISWNLMSSYLV
Sbjct: 464 SHMKISWNLMSSYLV 478


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 468

 Score =  319 bits (817), Expect = 6e-85
 Identities = 154/192 (80%), Positives = 170/192 (88%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEGLI APL+KVLL+DG+TERV+LA +SGLEA+QEA+TEYRVLGP INGCSWIELRP 
Sbjct: 279 KEKEGLIRAPLSKVLLNDGKTERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPL 338

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGW VH RWKQMPRVD EP +G+PYKLRRP GLDVQ
Sbjct: 339 TSRKHQLRVHCAEALGTPIVGDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQ 398

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSVLSKVPLLHLHCRE VLPN+AKF+ + N    N H  P  D+KPD+LRFVA MP+HM
Sbjct: 399 KGSVLSKVPLLHLHCREFVLPNIAKFLAVLNEKSENIH--PALDAKPDLLRFVASMPTHM 456

Query: 541 KISWNLMSSYLV 576
           KISWNLMSSYLV
Sbjct: 457 KISWNLMSSYLV 468


>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
           gi|557086377|gb|ESQ27229.1| hypothetical protein
           EUTSA_v10018480mg [Eutrema salsugineum]
          Length = 478

 Score =  318 bits (816), Expect = 8e-85
 Identities = 152/193 (78%), Positives = 172/193 (89%), Gaps = 1/193 (0%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K KEG+I AP++KVLLDDG+T+RV+LA  SG EA+QEAITEYRVLGP INGCSW+ELRP 
Sbjct: 288 KDKEGVISAPISKVLLDDGKTDRVVLARGSGFEASQEAITEYRVLGPMINGCSWLELRPL 347

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH +WKQMP+VD EPT+G+PYKLRRPEGLD+Q
Sbjct: 348 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHKKWKQMPQVDIEPTSGKPYKLRRPEGLDIQ 407

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIE-LHNRPFGNYHVDPEHDSKPDILRFVAPMPSH 537
           KGSVLSKVPLLHLHCREMVLPN+AKF+  L+N+   + H  P   SKPD+LRFVA MPSH
Sbjct: 408 KGSVLSKVPLLHLHCREMVLPNIAKFLHVLNNQEIDSLH--PGIISKPDLLRFVASMPSH 465

Query: 538 MKISWNLMSSYLV 576
           MKISWN+MSSYLV
Sbjct: 466 MKISWNIMSSYLV 478


>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 469

 Score =  318 bits (816), Expect = 8e-85
 Identities = 155/193 (80%), Positives = 171/193 (88%), Gaps = 1/193 (0%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEGLICAPLTKVLLDDG+TERVILA+ SGLEA+Q A+T+YRVLGPTINGCSWIEL+P 
Sbjct: 280 KEKEGLICAPLTKVLLDDGKTERVILAHQSGLEASQPALTQYRVLGPTINGCSWIELQPL 339

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP +D EP TG  YKLRRP GLDVQ
Sbjct: 340 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHIDIEPATGLQYKLRRPAGLDVQ 399

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGN-YHVDPEHDSKPDILRFVAPMPSH 537
           KGSV+SKVPLLHLHCRE+VLPN+AKF+ L ++   N Y VD    SKPD+LRFVA MP+H
Sbjct: 400 KGSVVSKVPLLHLHCRELVLPNIAKFLCLLDQKLDNRYTVD---SSKPDVLRFVASMPTH 456

Query: 538 MKISWNLMSSYLV 576
           MKISWNLMSSYLV
Sbjct: 457 MKISWNLMSSYLV 469


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
           sinensis]
          Length = 471

 Score =  318 bits (815), Expect = 1e-84
 Identities = 155/195 (79%), Positives = 173/195 (88%), Gaps = 3/195 (1%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           ++K+G+I APL+KVLLDDG+TER+ILA NSGLEA+QEA+TEYRVLGP INGCSWIELRP 
Sbjct: 279 REKQGIIRAPLSKVLLDDGKTERIILAQNSGLEASQEAMTEYRVLGPMINGCSWIELRPL 338

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           T RKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPT+G+PYKLRRP+GLDVQ
Sbjct: 339 TCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQ 398

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSK---PDILRFVAPMP 531
           KGSVLSKVPLLHLHCRE+VLPN+AKFI + N+   N  + P   SK   PD+LRFVA MP
Sbjct: 399 KGSVLSKVPLLHLHCRELVLPNIAKFINVLNQKSDN--LFPTLSSKPDGPDLLRFVASMP 456

Query: 532 SHMKISWNLMSSYLV 576
           SHMKISWNLMSSYLV
Sbjct: 457 SHMKISWNLMSSYLV 471


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
           gi|557538602|gb|ESR49646.1| hypothetical protein
           CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  317 bits (813), Expect = 2e-84
 Identities = 155/195 (79%), Positives = 172/195 (88%), Gaps = 3/195 (1%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+K+G+I APL+KVLLDDG+TER+ILA NSGLEA+QEA+TEYRVLGP INGCSWIELRP 
Sbjct: 279 KEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRPL 338

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           T RKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPT+G+PYKLRRP+GLDVQ
Sbjct: 339 TCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQ 398

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSK---PDILRFVAPMP 531
           KGSVLSKVPLLHLHCRE+VLPN+AKF  + N+   N  + P   SK   PD+LRFVA MP
Sbjct: 399 KGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDN--LFPTLSSKPDGPDLLRFVASMP 456

Query: 532 SHMKISWNLMSSYLV 576
           SHMKISWNLMSSYLV
Sbjct: 457 SHMKISWNLMSSYLV 471


>ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
           gi|557538601|gb|ESR49645.1| hypothetical protein
           CICLE_v10031422mg [Citrus clementina]
          Length = 343

 Score =  317 bits (813), Expect = 2e-84
 Identities = 155/195 (79%), Positives = 172/195 (88%), Gaps = 3/195 (1%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+K+G+I APL+KVLLDDG+TER+ILA NSGLEA+QEA+TEYRVLGP INGCSWIELRP 
Sbjct: 151 KEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRPL 210

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           T RKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPT+G+PYKLRRP+GLDVQ
Sbjct: 211 TCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQ 270

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSK---PDILRFVAPMP 531
           KGSVLSKVPLLHLHCRE+VLPN+AKF  + N+   N  + P   SK   PD+LRFVA MP
Sbjct: 271 KGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDN--LFPTLSSKPDGPDLLRFVASMP 328

Query: 532 SHMKISWNLMSSYLV 576
           SHMKISWNLMSSYLV
Sbjct: 329 SHMKISWNLMSSYLV 343


>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
           lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
           ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  317 bits (811), Expect = 3e-84
 Identities = 155/196 (79%), Positives = 170/196 (86%), Gaps = 4/196 (2%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEGLI APL+KVLLDDG+T+RV+LA  SG EA+QEAITEYRVLGP INGCSW+ELRP 
Sbjct: 287 KEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQEAITEYRVLGPMINGCSWLELRPI 346

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGT IVGDYKYGWFVH RWKQMP+VD EPTTG+PYKLRRPEGLDVQ
Sbjct: 347 TSRKHQLRVHCAEALGTSIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQ 406

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNR----PFGNYHVDPEHDSKPDILRFVAPM 528
           KGSVLSKVPLLHLHCREMVLPN+AKF+ + N+    P     +D     KPD+LRFVA M
Sbjct: 407 KGSVLSKVPLLHLHCREMVLPNIAKFLHVLNQQETEPLRTGIID-----KPDLLRFVASM 461

Query: 529 PSHMKISWNLMSSYLV 576
           PSHMKISWNLMSSYLV
Sbjct: 462 PSHMKISWNLMSSYLV 477


>ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Capsella rubella]
           gi|482569081|gb|EOA33269.1| hypothetical protein
           CARUB_v10022381mg [Capsella rubella]
          Length = 478

 Score =  316 bits (810), Expect = 4e-84
 Identities = 155/196 (79%), Positives = 170/196 (86%), Gaps = 4/196 (2%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEGLI APL+KVLLDDG+T+RV+LA  S  EA+QEAITEYRVLGP INGCSW+ELRP 
Sbjct: 288 KEKEGLISAPLSKVLLDDGKTDRVVLAQGSCFEASQEAITEYRVLGPMINGCSWLELRPI 347

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+VD EPTTG+PYKLRRPEGLDVQ
Sbjct: 348 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQ 407

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNR----PFGNYHVDPEHDSKPDILRFVAPM 528
           KGSVLSKVPLLHLHCREMVLPN+AKF+ + N+    P     +D     KPD+LRFVA M
Sbjct: 408 KGSVLSKVPLLHLHCREMVLPNIAKFLHVLNQQEAEPIRTGIID-----KPDLLRFVASM 462

Query: 529 PSHMKISWNLMSSYLV 576
           PSHMKISWNLMSSYLV
Sbjct: 463 PSHMKISWNLMSSYLV 478


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  314 bits (804), Expect = 2e-83
 Identities = 154/201 (76%), Positives = 171/201 (85%), Gaps = 9/201 (4%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEGLI APL+KVLLDDG+T+RV+LA  SG EA+Q+AITEY+VLGP INGCSW+ELRP 
Sbjct: 295 KEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPI 354

Query: 181 TSRKHQ------LRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRP 342
           TSRKHQ      LRVHCAEALGTPIVGDYKYGWFVH RWKQMP+VD EPTTG+PYKLRRP
Sbjct: 355 TSRKHQPPSKKQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRP 414

Query: 343 EGLDVQKGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHD---SKPDILR 513
           EGLDVQKGSVLSKVPLLHLHCREMVLPN+AKF+ + N+       +P H     KPD+LR
Sbjct: 415 EGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQ----QETEPLHTGIIDKPDLLR 470

Query: 514 FVAPMPSHMKISWNLMSSYLV 576
           FVA MPSHMKISWNLMSSYLV
Sbjct: 471 FVASMPSHMKISWNLMSSYLV 491


>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
           X1 [Cicer arietinum]
          Length = 479

 Score =  312 bits (800), Expect = 6e-83
 Identities = 147/192 (76%), Positives = 169/192 (88%)
 Frame = +1

Query: 1   KQKEGLICAPLTKVLLDDGETERVILANNSGLEAAQEAITEYRVLGPTINGCSWIELRPH 180
           K+KEG+I APL+KVLL+DG+TERVILA+ S +E  QEA+TEYRVLGP INGCSW+ELRP 
Sbjct: 290 KEKEGIIHAPLSKVLLNDGKTERVILAHESSIEPHQEAVTEYRVLGPKINGCSWVELRPL 349

Query: 181 TSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQ 360
           T RKHQLRVHCAEALGTPIVGDYKYGWFVH+RWKQMPRVD EPTTG+PYKLRRPEGLDVQ
Sbjct: 350 TYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQ 409

Query: 361 KGSVLSKVPLLHLHCREMVLPNVAKFIELHNRPFGNYHVDPEHDSKPDILRFVAPMPSHM 540
           KGSVLSKVPLLHLHCRE+ LPN+AKF+ +  +   +  +DP    +PD+LRFVA MP+HM
Sbjct: 410 KGSVLSKVPLLHLHCRELALPNIAKFLNVLEK--SSQQLDPSLSLQPDVLRFVATMPNHM 467

Query: 541 KISWNLMSSYLV 576
           +ISWNLMSSYLV
Sbjct: 468 RISWNLMSSYLV 479