BLASTX nr result
ID: Rehmannia26_contig00027914
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00027914
(375 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS57236.1| hypothetical protein M569_17584, partial [Genlise... 171 9e-41
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s... 159 3e-37
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s... 154 1e-35
emb|CBI22720.3| unnamed protein product [Vitis vinifera] 137 1e-30
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera] 136 2e-30
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s... 125 8e-27
gb|EOY23206.1| RNA polymerase III subunit RPC82 family protein, ... 119 5e-25
gb|EOY23205.1| RNA polymerase III subunit RPC82 family protein, ... 119 5e-25
emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera] 115 6e-24
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor... 114 1e-23
emb|CBI26210.3| unnamed protein product [Vitis vinifera] 113 2e-23
ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III s... 110 1e-22
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s... 110 1e-22
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr... 110 1e-22
ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citr... 110 1e-22
ref|XP_006421931.1| hypothetical protein CICLE_v10004721mg [Citr... 110 1e-22
ref|XP_003592281.1| DNA-directed RNA polymerase III subunit RPC3... 108 7e-22
ref|XP_003592280.1| DNA-directed RNA polymerase III subunit RPC3... 108 7e-22
ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Popu... 108 9e-22
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei... 108 9e-22
>gb|EPS57236.1| hypothetical protein M569_17584, partial [Genlisea aurea]
Length = 188
Score = 171 bits (433), Expect = 9e-41
Identities = 82/123 (66%), Positives = 105/123 (85%)
Frame = -3
Query: 370 LAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHKL 191
LAQI +STEL+R++V+NCLRVLIHQNCVQAFA+Q EG PR+VTQY+ALF NI+HKL
Sbjct: 16 LAQIIRSTELNRQSVVNCLRVLIHQNCVQAFAIQEEGQ----PRVVTQYLALFENILHKL 71
Query: 190 RAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSDIHVVRESFIRLLN 11
RA KF+QIVS+EL ++CLGIF G++QHGRLS+ + IDR+ Q GSSD+ ++RESF +L+N
Sbjct: 72 RASKFLQIVSDELDQNCLGIFHGMLQHGRLSINQTIDRSGQMEGSSDVVIIRESFNKLVN 131
Query: 10 ARF 2
ARF
Sbjct: 132 ARF 134
>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like
[Solanum tuberosum]
Length = 525
Score = 159 bits (403), Expect = 3e-37
Identities = 78/126 (61%), Positives = 99/126 (78%), Gaps = 2/126 (1%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
TL Q+ STEL+R NV NCL VLIH NCVQAFA+Q+ G FGE P+++TQYMALF+NIIHK
Sbjct: 36 TLYQVVSSTELTRTNVKNCLLVLIHHNCVQAFALQQPGGFGEEPKVITQYMALFDNIIHK 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTA--GSSDIHVVRESFIR 20
LR PKF++IVSEE+GK+C IF+GL+QHGRL+L II+R ++ + G S R+SF
Sbjct: 96 LRFPKFIEIVSEEMGKECEEIFEGLLQHGRLTLTEIIERYKEASKQGDSSADAARDSFNS 155
Query: 19 LLNARF 2
L+NARF
Sbjct: 156 LVNARF 161
>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like
[Solanum lycopersicum]
Length = 525
Score = 154 bits (389), Expect = 1e-35
Identities = 78/126 (61%), Positives = 98/126 (77%), Gaps = 2/126 (1%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
TL Q+ STELSR+NV NCL VLIH NCVQAFA+++ G FGE +I+TQYMALF+NIIHK
Sbjct: 36 TLHQVVSSTELSRKNVKNCLLVLIHHNCVQAFAIRQPGGFGEEAKIITQYMALFDNIIHK 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTA--GSSDIHVVRESFIR 20
LR PKF++IVSEELGK+C I + L+QHGRLSL +II + +Q + G S ++SF R
Sbjct: 96 LRFPKFIEIVSEELGKECEEILEWLLQHGRLSLSQIIVKYKQASKQGDSSADAAQDSFNR 155
Query: 19 LLNARF 2
L+NARF
Sbjct: 156 LVNARF 161
>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
Length = 524
Score = 137 bits (346), Expect = 1e-30
Identities = 69/127 (54%), Positives = 96/127 (75%), Gaps = 3/127 (2%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
TLA + + TEL + V +C+ VLI NCVQAFA+Q+E FGEAPR+VTQYMALF+NI+H+
Sbjct: 36 TLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHR 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDR--NEQTAGSSDIH-VVRESFI 23
+R KF+ IVSEEL K+C I +GL+QHGRL+L++I+DR + Q+ G + +RESF+
Sbjct: 96 MRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFL 155
Query: 22 RLLNARF 2
+L+ A F
Sbjct: 156 KLVRAHF 162
>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
Length = 721
Score = 136 bits (343), Expect = 2e-30
Identities = 67/125 (53%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
TLA + + TEL + V +C+ VLI NCVQAFA+Q+E FGEAPR+VTQYMALF+NI+H+
Sbjct: 36 TLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHR 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSDIH-VVRESFIRL 17
+R KF+ IVSEEL K+C I +GL+QHGRL+L++I+DR + + +RESF++L
Sbjct: 96 MRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQREPVVQDALRESFLKL 155
Query: 16 LNARF 2
+ A F
Sbjct: 156 VRAHF 160
>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
vinifera]
Length = 511
Score = 125 bits (313), Expect = 8e-27
Identities = 64/125 (51%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
TLA + + TEL + V +C+ VLI NCVQAFA+Q+E APR+VTQYMALF+NI+H+
Sbjct: 36 TLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQE-----APRVVTQYMALFHNILHR 90
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSDIH-VVRESFIRL 17
+R KF+ IVSEEL K+C I +GL+QHGRL+L++I+DR + + +RESF++L
Sbjct: 91 MRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQREPVVQDALRESFLKL 150
Query: 16 LNARF 2
+ A F
Sbjct: 151 VRAHF 155
>gb|EOY23206.1| RNA polymerase III subunit RPC82 family protein, putative isoform 2
[Theobroma cacao]
Length = 463
Score = 119 bits (297), Expect = 5e-25
Identities = 60/127 (47%), Positives = 86/127 (67%), Gaps = 3/127 (2%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
TL I + TEL+ V N L VLI NCVQAF +++ G+ G+ ++ +QY+ALFNNIIH+
Sbjct: 36 TLQAIVRFTELTSSQVKNSLLVLIQHNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHR 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSD---IHVVRESFI 23
R PKF+ IVS++L K C+ + + L+ HGRL+LK++ DR + D + VRE+FI
Sbjct: 96 WRFPKFLTIVSQKLDKQCVELIEALLLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFI 155
Query: 22 RLLNARF 2
+LLNA F
Sbjct: 156 KLLNAHF 162
>gb|EOY23205.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
[Theobroma cacao]
Length = 523
Score = 119 bits (297), Expect = 5e-25
Identities = 60/127 (47%), Positives = 86/127 (67%), Gaps = 3/127 (2%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
TL I + TEL+ V N L VLI NCVQAF +++ G+ G+ ++ +QY+ALFNNIIH+
Sbjct: 36 TLQAIVRFTELTSSQVKNSLLVLIQHNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHR 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSD---IHVVRESFI 23
R PKF+ IVS++L K C+ + + L+ HGRL+LK++ DR + D + VRE+FI
Sbjct: 96 WRFPKFLTIVSQKLDKQCVELIEALLLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFI 155
Query: 22 RLLNARF 2
+LLNA F
Sbjct: 156 KLLNAHF 162
>emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]
Length = 549
Score = 115 bits (288), Expect = 6e-24
Identities = 58/126 (46%), Positives = 88/126 (69%), Gaps = 3/126 (2%)
Frame = -3
Query: 370 LAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHKL 191
L I ++T+LS + V L+VLI NCVQAFA++ EG GE P +VTQYM LF+NI+H++
Sbjct: 37 LDDIVRTTKLSPQQVKTYLKVLIQHNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRM 96
Query: 190 RAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDR--NEQTAGSSDIH-VVRESFIR 20
R PK + IVS+EL K+C +F+ ++HG L+L++I+DR + Q G+ + +R SF +
Sbjct: 97 RFPKLLAIVSKELDKECEKLFEAFLKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTK 156
Query: 19 LLNARF 2
L+NA +
Sbjct: 157 LVNAHY 162
>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
Length = 564
Score = 114 bits (285), Expect = 1e-23
Identities = 62/124 (50%), Positives = 86/124 (69%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
TL Q+ + TEL+ + N L +LI NCVQ F+ ++ GA G + VTQY+ LF+NI+H+
Sbjct: 36 TLQQLIRFTELTPLQIKNSLLILIQHNCVQPFSSEQIGAGGNEVK-VTQYLVLFDNILHR 94
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSDIHVVRESFIRLL 14
LR PKF++IVSEEL K+C I +GL+QHGRL+L++I +R A VRESF +LL
Sbjct: 95 LRFPKFLEIVSEELDKNCGEILEGLLQHGRLTLEQIYERARDNAVQD---AVRESFQKLL 151
Query: 13 NARF 2
N+RF
Sbjct: 152 NSRF 155
>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 113 bits (283), Expect = 2e-23
Identities = 57/126 (45%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Frame = -3
Query: 370 LAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHKL 191
L I ++ +LS + V L+VLI NCVQAFA++ EG GE P +VTQYM LF+NI+H++
Sbjct: 37 LDDIVRTAKLSPQQVKTYLKVLIQHNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRM 96
Query: 190 RAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDR--NEQTAGSSDIH-VVRESFIR 20
R PK + IVS+EL K+C +F+ ++HG L+L++I+DR + Q G+ + +R SF +
Sbjct: 97 RFPKLLAIVSKELDKECEELFEAFLKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTK 156
Query: 19 LLNARF 2
L+NA +
Sbjct: 157 LVNAHY 162
>ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
isoform X3 [Citrus sinensis]
Length = 444
Score = 110 bits (276), Expect = 1e-22
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 3/127 (2%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
T + + TELS E V N L VLI QNCVQAF ++ F + P+ TQY+ LF+NI+H+
Sbjct: 36 TRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHR 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDR---NEQTAGSSDIHVVRESFI 23
+R KF+ I+S+E + C+ + QGL++HGRL+LK++ DR +E+ D+ +RE+ +
Sbjct: 96 VRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLV 155
Query: 22 RLLNARF 2
+L+ A +
Sbjct: 156 KLVTAHY 162
>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
isoform X2 [Citrus sinensis]
Length = 512
Score = 110 bits (276), Expect = 1e-22
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 3/127 (2%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
T + + TELS E V N L VLI QNCVQAF ++ F + P+ TQY+ LF+NI+H+
Sbjct: 36 TRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHR 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDR---NEQTAGSSDIHVVRESFI 23
+R KF+ I+S+E + C+ + QGL++HGRL+LK++ DR +E+ D+ +RE+ +
Sbjct: 96 VRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLV 155
Query: 22 RLLNARF 2
+L+ A +
Sbjct: 156 KLVTAHY 162
>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC3-like isoform X1 [Citrus
sinensis] gi|557523806|gb|ESR35173.1| hypothetical
protein CICLE_v10004721mg [Citrus clementina]
Length = 527
Score = 110 bits (276), Expect = 1e-22
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 3/127 (2%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
T + + TELS E V N L VLI QNCVQAF ++ F + P+ TQY+ LF+NI+H+
Sbjct: 36 TRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHR 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDR---NEQTAGSSDIHVVRESFI 23
+R KF+ I+S+E + C+ + QGL++HGRL+LK++ DR +E+ D+ +RE+ +
Sbjct: 96 VRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLV 155
Query: 22 RLLNARF 2
+L+ A +
Sbjct: 156 KLVTAHY 162
>ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
gi|557523805|gb|ESR35172.1| hypothetical protein
CICLE_v10004721mg [Citrus clementina]
Length = 433
Score = 110 bits (276), Expect = 1e-22
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 3/127 (2%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
T + + TELS E V N L VLI QNCVQAF ++ F + P+ TQY+ LF+NI+H+
Sbjct: 36 TRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHR 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDR---NEQTAGSSDIHVVRESFI 23
+R KF+ I+S+E + C+ + QGL++HGRL+LK++ DR +E+ D+ +RE+ +
Sbjct: 96 VRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLV 155
Query: 22 RLLNARF 2
+L+ A +
Sbjct: 156 KLVTAHY 162
>ref|XP_006421931.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
gi|557523804|gb|ESR35171.1| hypothetical protein
CICLE_v10004721mg [Citrus clementina]
Length = 322
Score = 110 bits (276), Expect = 1e-22
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 3/127 (2%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHK 194
T + + TELS E V N L VLI QNCVQAF ++ F + P+ TQY+ LF+NI+H+
Sbjct: 36 TRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHR 95
Query: 193 LRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDR---NEQTAGSSDIHVVRESFI 23
+R KF+ I+S+E + C+ + QGL++HGRL+LK++ DR +E+ D+ +RE+ +
Sbjct: 96 VRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLV 155
Query: 22 RLLNARF 2
+L+ A +
Sbjct: 156 KLVTAHY 162
>ref|XP_003592281.1| DNA-directed RNA polymerase III subunit RPC3 [Medicago truncatula]
gi|355481329|gb|AES62532.1| DNA-directed RNA polymerase
III subunit RPC3 [Medicago truncatula]
Length = 505
Score = 108 bits (270), Expect = 7e-22
Identities = 59/125 (47%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVT-QYMALFNNIIH 197
TL +T+ TELS E+V N L VLI NCVQAF E + R+V +Y+ LF+NI+H
Sbjct: 36 TLELVTRYTELSNEHVKNSLLVLIQHNCVQAFT---EAGDEDGSRVVKPKYLVLFDNIVH 92
Query: 196 KLRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSDIHVVRESFIRL 17
+LR PKFM+IVS+EL C+ I +GL++ GRL+LK+++D + + VRES RL
Sbjct: 93 RLRFPKFMEIVSQELDDKCVTILKGLLRDGRLTLKQLVDMGQDKENAMAPDAVRESLCRL 152
Query: 16 LNARF 2
L AR+
Sbjct: 153 LRARY 157
>ref|XP_003592280.1| DNA-directed RNA polymerase III subunit RPC3 [Medicago truncatula]
gi|355481328|gb|AES62531.1| DNA-directed RNA polymerase
III subunit RPC3 [Medicago truncatula]
Length = 468
Score = 108 bits (270), Expect = 7e-22
Identities = 59/125 (47%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Frame = -3
Query: 373 TLAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVT-QYMALFNNIIH 197
TL +T+ TELS E+V N L VLI NCVQAF E + R+V +Y+ LF+NI+H
Sbjct: 36 TLELVTRYTELSNEHVKNSLLVLIQHNCVQAFT---EAGDEDGSRVVKPKYLVLFDNIVH 92
Query: 196 KLRAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSDIHVVRESFIRL 17
+LR PKFM+IVS+EL C+ I +GL++ GRL+LK+++D + + VRES RL
Sbjct: 93 RLRFPKFMEIVSQELDDKCVTILKGLLRDGRLTLKQLVDMGQDKENAMAPDAVRESLCRL 152
Query: 16 LNARF 2
L AR+
Sbjct: 153 LRARY 157
>ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Populus trichocarpa]
gi|550322613|gb|ERP52417.1| hypothetical protein
POPTR_0015s13040g [Populus trichocarpa]
Length = 437
Score = 108 bits (269), Expect = 9e-22
Identities = 52/123 (42%), Positives = 80/123 (65%)
Frame = -3
Query: 370 LAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHKL 191
L +I + TELS V NCL VLI NC+Q F ++ EG FGE ++ + YM LF+N++H++
Sbjct: 37 LREIVRYTELSETLVRNCLLVLIQHNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRV 96
Query: 190 RAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSDIHVVRESFIRLLN 11
R KFM IVS+E K C+ + + L+QHGRLS ++I D + S + ++E+ +L+
Sbjct: 97 RFSKFMAIVSQEFDKLCVDLIETLLQHGRLSSEQIFDGFRDRSSSGGMEALQENMHKLVM 156
Query: 10 ARF 2
AR+
Sbjct: 157 ARY 159
>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
RPC82 family protein [Populus trichocarpa]
Length = 520
Score = 108 bits (269), Expect = 9e-22
Identities = 52/123 (42%), Positives = 80/123 (65%)
Frame = -3
Query: 370 LAQITQSTELSRENVINCLRVLIHQNCVQAFAVQREGAFGEAPRIVTQYMALFNNIIHKL 191
L +I + TELS V NCL VLI NC+Q F ++ EG FGE ++ + YM LF+N++H++
Sbjct: 37 LREIVRYTELSETLVRNCLLVLIQHNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRV 96
Query: 190 RAPKFMQIVSEELGKDCLGIFQGLIQHGRLSLKRIIDRNEQTAGSSDIHVVRESFIRLLN 11
R KFM IVS+E K C+ + + L+QHGRLS ++I D + S + ++E+ +L+
Sbjct: 97 RFSKFMAIVSQEFDKLCVDLIETLLQHGRLSSEQIFDGFRDRSSSGGMEALQENMHKLVM 156
Query: 10 ARF 2
AR+
Sbjct: 157 ARY 159