BLASTX nr result
ID: Rehmannia26_contig00027773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00027773
(962 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein A... 47 1e-08
gb|EMJ22599.1| hypothetical protein PRUPE_ppa021131mg, partial [... 42 2e-07
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 42 3e-07
gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indi... 42 3e-07
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo... 42 3e-07
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 41 5e-07
gb|EEC81735.1| hypothetical protein OsI_25376 [Oryza sativa Indi... 42 5e-07
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 42 8e-07
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 42 8e-07
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi... 42 1e-06
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 42 2e-06
gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group] 42 2e-06
gb|EMJ25696.1| hypothetical protein PRUPE_ppa023013mg, partial [... 44 2e-06
ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group] g... 41 3e-06
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 42 8e-06
>ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 813
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKLPITFLIDLNMK 5
R+ K + W GK +S AGK ILI+ AQA+P MSCF LP +F L+ K
Sbjct: 272 RLSKKLEGWQGKLLSGAGKGILIRVVAQALPSYSMSCFLLPKSFYAALHQK 322
Score = 39.3 bits (90), Expect(2) = 1e-08
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS---VLRRIKEGLYQKI 139
I+ S TPV ++ I L V V+ EKYLGLP GKS IKE L +K+
Sbjct: 222 IVFSKGTPVSLQSSIAGELGVGVVVKHEKYLGLPTYVGKSKTETFAFIKERLSKKL 277
>gb|EMJ22599.1| hypothetical protein PRUPE_ppa021131mg, partial [Prunus persica]
Length = 215
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKLPITFLIDLNMKI 2
R+ K W GK +S+A KA+LI++ A +IP M KLP+TF + N I
Sbjct: 152 RLRKKLNGWKGKLLSKAVKALLIKALAHSIPNYAMGALKLPVTFCAEFNSMI 203
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLG-LPLCFG---KSVLRRIKEGLYQKIN 136
I SPNTPV +R E+ S L + V EKYLG L + G K IKE L +K+N
Sbjct: 101 IAFSPNTPVHLRNEVCSILKIPVVEFHEKYLGLLTVIIGRKKKDCFNIIKERLRKKLN 158
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 41.6 bits (96), Expect(2) = 3e-07
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS---VLRRIKEGLYQKI 139
+M SPNT + +M+ LN+ + EKYLGLP+ G+S + +KE ++Q+I
Sbjct: 950 VMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRI 1005
Score = 40.4 bits (93), Expect(2) = 3e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKL 38
RI + Q W K +S+AGK ILI++ AQAIP M CF+L
Sbjct: 1000 RIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFEL 1039
>gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indica Group]
Length = 724
Score = 42.0 bits (97), Expect(2) = 3e-07
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = -3
Query: 303 F*IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGK---SVLRRIKEGLYQKI 139
F IM S NT E R E+M TL ++K E+YLGLP+ G+ V +K+ ++++I
Sbjct: 236 FAIMFSSNTGSEKRREVMQTLQINKQTMNERYLGLPVFVGRDKTKVFAYLKDRIWKRI 293
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKLPIT 29
RI + Q W K +S+AGK ILI++ AQAIP M+CF + T
Sbjct: 288 RIWKRIQGWKEKMLSRAGKEILIKAVAQAIPTFAMACFDITKT 330
>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
Length = 662
Score = 42.0 bits (97), Expect(2) = 3e-07
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = -3
Query: 303 F*IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGK---SVLRRIKEGLYQKI 139
F IM S NT E R E+M TL ++K E+YLGLP+ G+ V +K+ ++++I
Sbjct: 406 FAIMFSSNTGSEKRREVMQTLQINKQTMNERYLGLPVFVGRDKTKVFAYLKDRIWKRI 463
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKLPIT 29
RI + Q W K +S+AGK ILI++ AQAIP M+CF + T
Sbjct: 458 RIWKRIQGWKEKMLSRAGKEILIKAVAQAIPTFAMACFDITKT 500
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 40.8 bits (94), Expect(2) = 5e-07
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS---VLRRIKEGLYQKI 139
+M SPNT + +M+ LN+ + E+YLGLP+ G+S + +KE ++Q+I
Sbjct: 977 VMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRI 1032
Score = 40.4 bits (93), Expect(2) = 5e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKL 38
RI + Q W K +S+AGK ILI++ AQAIP M CF+L
Sbjct: 1027 RIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFEL 1066
>gb|EEC81735.1| hypothetical protein OsI_25376 [Oryza sativa Indica Group]
Length = 235
Score = 42.4 bits (98), Expect(2) = 5e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKLPITF 26
RI + Q W K +S+AGK ILI++ AQAIPI M+CF + F
Sbjct: 188 RIWKRIQGWKEKMLSRAGKEILIKAVAQAIPIFAMACFDITKNF 231
Score = 38.9 bits (89), Expect(2) = 5e-07
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGK---SVLRRIKEGLYQKI 139
+M SPNT R E+M L +++ E+YLGLP+ G+ V +K+ ++++I
Sbjct: 138 VMFSPNTSNSKRNEVMQALQINRQTMNERYLGLPVYVGRDKMKVFAYLKDRIWKRI 193
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 41.6 bits (96), Expect(2) = 8e-07
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS---VLRRIKEGLYQKI 139
+M SPNT + +M+ LN+ + EKYLGLP+ G+S + +KE ++Q+I
Sbjct: 922 VMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRI 977
Score = 38.9 bits (89), Expect(2) = 8e-07
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKL 38
RI + Q W K +S+AGK ILI++ AQ IP M CF+L
Sbjct: 972 RIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFEL 1011
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 41.6 bits (96), Expect(2) = 8e-07
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS---VLRRIKEGLYQKI 139
+M SPNT + +M+ LN+ + EKYLGLP+ G+S + +KE ++Q+I
Sbjct: 918 VMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRI 973
Score = 38.9 bits (89), Expect(2) = 8e-07
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKL 38
RI + Q W K +S+AGK ILI++ AQ IP M CF+L
Sbjct: 968 RIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFEL 1007
>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
gi|222630794|gb|EEE62926.1| hypothetical protein
OsJ_17731 [Oryza sativa Japonica Group]
Length = 893
Score = 42.4 bits (98), Expect(2) = 1e-06
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKLPITFLIDLN 11
R+ K Q W K +S+AGK ILI++ AQAIP MSCF L T +++
Sbjct: 446 RVWKKIQGWKEKLLSKAGKDILIKAVAQAIPTFAMSCFDLTKTLCDEIS 494
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS---VLRRIKEGLYQKI 139
IM S NT R +M L++S EKYLGLP+ G+S +KE +++KI
Sbjct: 396 IMFSKNTSQADRKMVMEILDISTEARNEKYLGLPVYMGRSRAKTFAYLKERVWKKI 451
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = -2
Query: 154 IVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKLPITFLIDLN 11
I+ K + W +SQAGK +LI++ A AIP M CFK P T +LN
Sbjct: 1381 ILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELN 1428
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS---VLRRIKEGLYQKI 139
I SPNTP EI + + S + + V D YLGLP + +S L IK+ + +K+
Sbjct: 1330 IFFSPNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSKKKALGFIKDSILRKV 1385
>gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1264
Score = 41.6 bits (96), Expect(2) = 2e-06
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = -2
Query: 160 RRIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKLPITFLIDLNMKI 2
R++ + Q W K +S+AGK IL+++ AQAIP MSCF L ++N I
Sbjct: 1118 RKVWLRIQGWQEKLLSKAGKEILVKAVAQAIPTYAMSCFDLTKGLCDEINSMI 1170
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS 178
++ SPNT R E+ S L +++ E+YLGLP+ GKS
Sbjct: 1069 VLFSPNTLQSDRMEVRSALCINQEAKNERYLGLPVSIGKS 1108
>gb|EMJ25696.1| hypothetical protein PRUPE_ppa023013mg, partial [Prunus persica]
Length = 607
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFG---KSVLRRIKEGLYQKIN 136
I SP+TP+++R E+ S L + V EKYLGLP G K IKE L +K+N
Sbjct: 38 IAFSPSTPMQLRNEVGSILAIPIVEFHEKYLGLPTVIGRKKKDCFNGIKERLRKKLN 94
Score = 35.8 bits (81), Expect(2) = 2e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -2
Query: 157 RIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKL 38
R+ K W K +S+AGKA+LI++ AQ+IP M FKL
Sbjct: 88 RLRKKLNGWKKKLLSKAGKALLIKAVAQSIPNYAMGVFKL 127
>ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group]
gi|255676397|dbj|BAH93171.1| Os05g0434000 [Oryza sativa
Japonica Group]
Length = 1478
Score = 40.8 bits (94), Expect(2) = 3e-06
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = -2
Query: 160 RRIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKL 38
R++ + Q W K +S+AGK IL+++ AQAIP MSCF L
Sbjct: 1118 RKVWLRIQGWQEKLLSKAGKEILVKAVAQAIPTYAMSCFDL 1158
Score = 37.7 bits (86), Expect(2) = 3e-06
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS 178
++ SPNT R E+ S L +++ E+YLGLP+ GKS
Sbjct: 1069 VLFSPNTLQSDRMEVRSALCINQEAKNERYLGLPVSIGKS 1108
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 41.6 bits (96), Expect(2) = 8e-06
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -2
Query: 160 RRIVSKNQCWHGKHISQAGKAILIQSGAQAIPICFMSCFKL 38
++I S+ Q W K +S+AGK ILI++ AQ+IP MSCF L
Sbjct: 351 KKIWSRIQGWQEKLLSKAGKEILIKAVAQSIPTYAMSCFDL 391
Score = 35.4 bits (80), Expect(2) = 8e-06
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -3
Query: 297 IMMSPNTPVEIRYEIMSTLNVSKVMDREKYLGLPLCFGKS 178
+M SPNT R + S L+++ EKYLGLP+ GKS
Sbjct: 302 MMFSPNTGQHDRSLMRSNLSITDEASTEKYLGLPVNIGKS 341