BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00027659
         (585 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   273   2e-71
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   192   5e-47
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   191   9e-47
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   191   9e-47
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     188   8e-46
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]           186   4e-45
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   186   5e-45
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     184   1e-44
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   184   1e-44
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...   184   2e-44
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        181   2e-43
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   179   5e-43
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   179   5e-43
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     178   8e-43
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   178   8e-43
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               178   8e-43
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                178   8e-43
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        174   1e-41
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         171   2e-40
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           171   2e-40

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  273 bits (699), Expect = 2e-71
 Identities = 137/194 (70%), Positives = 157/194 (80%), Gaps = 3/194 (1%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G++RHFT+R+TPQQNGV+ERMN+ LVEKVRCMLSNA LGR+ WAEAVTYAQHL+NRLPSS
Sbjct: 557  GIIRHFTIRKTPQQNGVSERMNKILVEKVRCMLSNAELGRKFWAEAVTYAQHLVNRLPSS 616

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            AI GKTPLEVWSGKP TDYDSL VFGS+ ++HV ESKL+PRAK+ALFMG + GVKGYRLW
Sbjct: 617  AIDGKTPLEVWSGKPATDYDSLHVFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLW 676

Query: 371  CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVEVEEMAIIPDKN---DI 541
            CLE+KK + SRDVTFDE AMLK V  E  DS  QQVE   KQVE E   +IP +N   D 
Sbjct: 677  CLEAKKTIISRDVTFDESAMLKKVNPEGADSTPQQVECARKQVEFEPKVVIPTRNTTSDS 736

Query: 542  PVTEDLS*DDEEEV 583
             + E+ S  DEEEV
Sbjct: 737  AMAEEES--DEEEV 748


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
            gi|20087076|gb|AAM10749.1|AC112514_2 Putative
            retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  192 bits (488), Expect = 5e-47
 Identities = 101/187 (54%), Positives = 123/187 (65%), Gaps = 5/187 (2%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+VRH+TV  TPQQNGVAERMNRT++ K RCMLSNAGL +Q WAEAV+ A +LINR PS 
Sbjct: 540  GIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSY 599

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            AI  KTP++VWSG P  +Y  LRVFG + + HV  SKLEPRA + +F+G  SGVKGY+LW
Sbjct: 600  AIDKKTPIKVWSGSP-ANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLW 658

Query: 371  CLESKKILFSRDVTFDEHAML-----KTVTSEKTDSALQQVERTPKQVEVEEMAIIPDKN 535
            C E+KK++ SR+V F E  ML       V  E  + A  QVE         E   +    
Sbjct: 659  CPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINL 718

Query: 536  DIPVTED 556
            D PV ED
Sbjct: 719  DAPVIED 725


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  191 bits (486), Expect = 9e-47
 Identities = 98/183 (53%), Positives = 126/183 (68%), Gaps = 1/183 (0%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+VRH+TV  TPQQNGVAERMNRT++ K RC+LSNAGL +Q WAEAV+ A +LINR PS 
Sbjct: 786  GIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSY 845

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            AI  KTP+EVWSG P  +Y  LRVFG   + HV   KLEPRA + +F+G  SGVKGY+LW
Sbjct: 846  AIDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLW 904

Query: 371  CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVE-VEEMAIIPDKNDIPV 547
            C E+KK++ SR+V F E  ML    S  T+  ++  E+   QVE +      P+K D+ +
Sbjct: 905  CPETKKVVISRNVVFHESVMLHDKPS--TNVPVESQEKASVQVEHLISSGHAPEKEDVAI 962

Query: 548  TED 556
             +D
Sbjct: 963  NQD 965


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
            gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
            Japonica Group]
          Length = 1601

 Score =  191 bits (486), Expect = 9e-47
 Identities = 98/183 (53%), Positives = 126/183 (68%), Gaps = 1/183 (0%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+VRH+TV  TPQQNGVAERMNRT++ K RC+LSNAGL +Q WAEAV+ A +LINR PS 
Sbjct: 579  GIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSY 638

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            AI  KTP+EVWSG P  +Y  LRVFG   + HV   KLEPRA + +F+G  SGVKGY+LW
Sbjct: 639  AIDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLW 697

Query: 371  CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVE-VEEMAIIPDKNDIPV 547
            C E+KK++ SR+V F E  ML    S  T+  ++  E+   QVE +      P+K D+ +
Sbjct: 698  CPETKKVVISRNVVFHESVMLHDKPS--TNVPVESQEKASVQVEHLISSGHAPEKEDVAI 755

Query: 548  TED 556
             +D
Sbjct: 756  NQD 758


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  188 bits (478), Expect = 8e-46
 Identities = 97/183 (53%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+VRH+TV  TPQQNGVAERMNRT++ K RCMLSNA L +Q WAEAV+ A +LINR PS 
Sbjct: 488  GIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSY 547

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            AI  KTP+EVWSG P  +Y  LRVFG   + HV   KLEPR  + +F+G  SGVKGY+LW
Sbjct: 548  AIDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLW 606

Query: 371  CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVE-VEEMAIIPDKNDIPV 547
            C E+KK++ SR+V F E  ML    S  T+  ++  E+   QVE +      P+K D+ +
Sbjct: 607  CPETKKVVISRNVVFHESIMLHDKPS--TNVPVESQEKVSVQVEHLISSGHAPEKEDVAI 664

Query: 548  TED 556
             +D
Sbjct: 665  NQD 667


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score =  186 bits (472), Expect = 4e-45
 Identities = 96/183 (52%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
 Frame = +2

Query: 11  GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
           G+VRH+TV  TPQQNGVAERMNRT++ K RCMLSNAGL +Q WAEAV+ A +LINR PS 
Sbjct: 400 GIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSY 459

Query: 191 AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
           AI  KTP+EVWS  P   Y  LRVF    + HV   KLEPRA + +F+G  SGVKGY+LW
Sbjct: 460 AIDKKTPIEVWSSSP-AKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLW 518

Query: 371 CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVE-VEEMAIIPDKNDIPV 547
           C E+KK++ +R+V F E  ML    S  T+  ++  E+   QVE +      P+K D+ +
Sbjct: 519 CPETKKVVINRNVVFHESVMLHDKPS--TNVPVESQEKASVQVEHLISSGHAPEKEDVAI 576

Query: 548 TED 556
            +D
Sbjct: 577 NQD 579


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  186 bits (471), Expect = 5e-45
 Identities = 96/187 (51%), Positives = 121/187 (64%), Gaps = 5/187 (2%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+VRH+TV  TPQQNGV ERMNRT++ K RCMLSNAGL R+ WAEA + A +LINR PS 
Sbjct: 518  GIVRHYTVSHTPQQNGVVERMNRTIISKARCMLSNAGLPRRFWAEAASTACYLINRSPSY 577

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            AI  KTP+E+WSG P  +Y  L+VFG   + HV   KLEPRA + +F+G  SGVK Y+LW
Sbjct: 578  AIDKKTPIEMWSGSP-ANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKAYKLW 636

Query: 371  CLESKKILFSRDVTFDEHAMLKTVTS-----EKTDSALQQVERTPKQVEVEEMAIIPDKN 535
            C E++K++ SR+V F+E  ML   +S     +    A  QVE     V V E   I    
Sbjct: 637  CPETQKVVISRNVIFNETVMLNDKSSTNVPVKSQQKASVQVEHLISSVHVPEKENIASNQ 696

Query: 536  DIPVTED 556
            D PV E+
Sbjct: 697  DAPVIEE 703


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  184 bits (468), Expect = 1e-44
 Identities = 95/183 (51%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+V H+T   TPQQN VAERMNRT++ K RCMLSNAGL +Q WAEAV+ A +LINR P  
Sbjct: 551  GIVCHYTAPHTPQQNDVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGY 610

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            AI  KTP+EVWSG P T+Y  LRVFG   + HV   KLEPRA + +F+G  SGVKGY+LW
Sbjct: 611  AIDKKTPIEVWSGSP-TNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYASGVKGYKLW 669

Query: 371  CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVE-VEEMAIIPDKNDIPV 547
            C E+KK++ SR+V F E  +L    S  T+  ++  E+   QVE +      P+K D+ +
Sbjct: 670  CPETKKVVISRNVVFHESVILHDKPS--TNVPVESQEKASVQVEHLISSGHAPEKEDVAI 727

Query: 548  TED 556
             +D
Sbjct: 728  NQD 730


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  184 bits (467), Expect = 1e-44
 Identities = 94/189 (49%), Positives = 131/189 (69%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+ RH TVR TPQQNGVAERMN+TL+E+ RCMLSNAGL R+ WAEAV+ A +LINR P +
Sbjct: 557  GIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHT 616

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
             I  KTP+E+WSGK   DY +L+ FG   ++HV E KLEPRAK+ +F+G   GVKG+R+W
Sbjct: 617  GIQCKTPMEMWSGK-AADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIW 675

Query: 371  CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVEVEEMAIIPDKNDIPVT 550
                K+++ SR+V FDE  +L+T+    T S    ++   KQVE +   +I +++D+   
Sbjct: 676  SPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLD---KQVEFQ---VIQNESDLKEP 729

Query: 551  EDLS*DDEE 577
            E+   +D+E
Sbjct: 730  EE---EDQE 735


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549746|gb|ABA92543.1|
            retrotransposon protein, putative, Ty1-copia subclass,
            expressed [Oryza sativa Japonica Group]
          Length = 1170

 Score =  184 bits (466), Expect = 2e-44
 Identities = 97/187 (51%), Positives = 119/187 (63%), Gaps = 5/187 (2%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+VRH+TV  TPQQNGVAERM RT++ K RCML   GL +Q WAEAV+ A +LINR PS 
Sbjct: 614  GIVRHYTVPHTPQQNGVAERMKRTIISKSRCMLPYVGLPKQFWAEAVSTACYLINRSPSY 673

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            AI  KTP+EVWSG P  +Y  LRVFG + + HV   KLEPRA + +F+G  SGVKGY+LW
Sbjct: 674  AIDKKTPIEVWSGSP-ANYSDLRVFGCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLW 732

Query: 371  CLESKKILFSRDVTFDEHAML-----KTVTSEKTDSALQQVERTPKQVEVEEMAIIPDKN 535
            C E+KK++ SR+V F E  ML       V  E  + A  QVE         E   +    
Sbjct: 733  CPETKKVVISRNVVFHESVMLYDNPSTNVPVESQEKASVQVEHLISSGHALEKEDVAINQ 792

Query: 536  DIPVTED 556
            D PV+ED
Sbjct: 793  DAPVSED 799


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  181 bits (458), Expect = 2e-43
 Identities = 95/183 (51%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+VRH+TV  TPQQNGVAERMNR ++ K RCMLSNAGL +Q WAEAV+ A +LINR PS 
Sbjct: 579  GIVRHYTVPHTPQQNGVAERMNRIIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSY 638

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            A   KTP+EVWSG P  +Y  L+VFG   + HV   KLEPRA + +F+G  S VKGY+LW
Sbjct: 639  A-NKKTPIEVWSGSP-ANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLW 696

Query: 371  CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVE-VEEMAIIPDKNDIPV 547
            C E+KK++ SR+V F E  ML    S  T+  ++  E+   QVE +      P+K D+ +
Sbjct: 697  CPETKKVVISRNVVFHESIMLHDKPS--TNVPVESQEKASVQVEHLINSGHAPEKEDVAI 754

Query: 548  TED 556
             +D
Sbjct: 755  NQD 757


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  179 bits (454), Expect = 5e-43
 Identities = 87/144 (60%), Positives = 109/144 (75%), Gaps = 2/144 (1%)
 Frame = +2

Query: 5    KYGLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLP 184
            K G+VRH TVR TPQQNGVAERMN+TLV++ RCM  +AGL ++ WAEAV  A +L+NR P
Sbjct: 676  KEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSP 735

Query: 185  SSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYR 364
            S+AI  KTP EVWSGKP ++Y  L++FG   + HV + KLEPRA + +F+G  +GVKGYR
Sbjct: 736  STAIDFKTPQEVWSGKP-SNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYR 794

Query: 365  LWCLESK--KILFSRDVTFDEHAM 430
            LWC E +  K + SRDVTFDE AM
Sbjct: 795  LWCTEDRTPKFIISRDVTFDESAM 818


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  179 bits (454), Expect = 5e-43
 Identities = 87/144 (60%), Positives = 109/144 (75%), Gaps = 2/144 (1%)
 Frame = +2

Query: 5    KYGLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLP 184
            K G+VRH TVR TPQQNGVAERMN+TLV++ RCM  +AGL ++ WAEAV  A +L+NR P
Sbjct: 889  KEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSP 948

Query: 185  SSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYR 364
            S+AI  KTP EVWSGKP ++Y  L++FG   + HV + KLEPRA + +F+G  +GVKGYR
Sbjct: 949  STAIDFKTPQEVWSGKP-SNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYR 1007

Query: 365  LWCLESK--KILFSRDVTFDEHAM 430
            LWC E +  K + SRDVTFDE AM
Sbjct: 1008 LWCTEDRTPKFIISRDVTFDESAM 1031


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  178 bits (452), Expect = 8e-43
 Identities = 94/187 (50%), Positives = 115/187 (61%), Gaps = 5/187 (2%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+V H+TV  TPQQNGVAERMN  ++ K RCMLSNA L +Q WAEAV+   +LINR PS 
Sbjct: 614  GIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSY 673

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            A   KTP+EVWSG P  +Y  LRVFG   + HV   KLEPRA + +F+G  SGVKGY+LW
Sbjct: 674  ATDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLW 732

Query: 371  CLESKKILFSRDVTFDEHAML-----KTVTSEKTDSALQQVERTPKQVEVEEMAIIPDKN 535
            C E+KK++ SR+V F E  +L       V  E  + A  QVE         E   +    
Sbjct: 733  CPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQ 792

Query: 536  DIPVTED 556
            D PV ED
Sbjct: 793  DAPVIED 799


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  178 bits (452), Expect = 8e-43
 Identities = 94/187 (50%), Positives = 115/187 (61%), Gaps = 5/187 (2%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G+V H+TV  TPQQNGVAERMN  ++ K RCMLSNA L +Q WAEAV+   +LINR PS 
Sbjct: 614  GIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSY 673

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            A   KTP+EVWSG P  +Y  LRVFG   + HV   KLEPRA + +F+G  SGVKGY+LW
Sbjct: 674  ATDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLW 732

Query: 371  CLESKKILFSRDVTFDEHAML-----KTVTSEKTDSALQQVERTPKQVEVEEMAIIPDKN 535
            C E+KK++ SR+V F E  +L       V  E  + A  QVE         E   +    
Sbjct: 733  CPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQ 792

Query: 536  DIPVTED 556
            D PV ED
Sbjct: 793  DAPVIED 799


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  178 bits (452), Expect = 8e-43
 Identities = 88/165 (53%), Positives = 115/165 (69%)
 Frame = +2

Query: 11  GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
           G++RH+TV  TPQQNGVAERMNRT++ K RCMLSNAGL +Q WAEAV+ A +LINR P  
Sbjct: 396 GIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGY 455

Query: 191 AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
           AI  KTP++VWSG P  +Y  L+VFG   + HV   KLEPR  + +F+G  SGVKGY+LW
Sbjct: 456 AIDKKTPIKVWSGSP-ANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLW 514

Query: 371 CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVEV 505
           C E+KK++ SR V F E  ML    S  T+  ++  E+   Q+++
Sbjct: 515 CPETKKVVISRYVVFHESVMLHDKPS--TNIPVESQEKASVQIQI 557


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  178 bits (452), Expect = 8e-43
 Identities = 88/165 (53%), Positives = 115/165 (69%)
 Frame = +2

Query: 11   GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
            G++RH+TV  TPQQNGVAERMNRT++ K RCMLSNAGL +Q WAEAV+ A +LINR P  
Sbjct: 564  GIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGY 623

Query: 191  AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
            AI  KTP++VWSG P  +Y  L+VFG   + HV   KLEPR  + +F+G  SGVKGY+LW
Sbjct: 624  AIDKKTPIKVWSGSP-ANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLW 682

Query: 371  CLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVEV 505
            C E+KK++ SR V F E  ML    S  T+  ++  E+   Q+++
Sbjct: 683  CPETKKVVISRYVVFHESVMLHDKPS--TNIPVESQEKASVQIQI 725


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  174 bits (442), Expect = 1e-41
 Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 4/194 (2%)
 Frame = +2

Query: 5    KYGLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLP 184
            K+G+ RH TVR TPQQNG+AERMNRTLV+K RCML N+ L R  WAEAV  A +L+NR P
Sbjct: 567  KHGIKRHKTVRFTPQQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVNRSP 626

Query: 185  SSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYR 364
            SSAIG KTP E+W+GKP  +Y +LRVFG   + H+ + KLE RA + +F+G   GVKGY+
Sbjct: 627  SSAIGFKTPEELWNGKP-ANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYK 685

Query: 365  LWCLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQ----VERTPKQVEVEEMAIIPDK 532
            +WC +  K + SRDV F E  +LK   S + D+ LQ      +R+  +     + ++ DK
Sbjct: 686  IWCKDQGKCIVSRDVVFHESVLLK--ESAEHDAGLQDNPAANKRSGSETSKVNVELLTDK 743

Query: 533  NDIPVTEDLS*DDE 574
            +     ++ + DDE
Sbjct: 744  SS---EKEAASDDE 754


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  171 bits (432), Expect = 2e-40
 Identities = 89/164 (54%), Positives = 114/164 (69%), Gaps = 2/164 (1%)
 Frame = +2

Query: 11  GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
           G+VRH+T    PQQNGVAERMNRT++ K RCMLSNAGL +Q WA AV+   +LINR PS 
Sbjct: 411 GIVRHYT----PQQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSY 466

Query: 191 AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
           AI  KTP++VWSG P  +Y  LRVFG   + HV   KLEPRA + +F+G +SGVKGY+LW
Sbjct: 467 AIDKKTPIKVWSGFP-ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLW 525

Query: 371 CLESKKILFSRDVTFDEHAML--KTVTSEKTDSALQQVERTPKQ 496
           C E+KK++ SR+V F E  ML  K  T+   +S  +   + PK+
Sbjct: 526 CPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQFPKR 569


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  171 bits (432), Expect = 2e-40
 Identities = 89/164 (54%), Positives = 114/164 (69%), Gaps = 2/164 (1%)
 Frame = +2

Query: 11  GLVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSS 190
           G+VRH+T    PQQNGVAERMNRT++ K RCMLSNAGL +Q WA AV+   +LINR PS 
Sbjct: 411 GIVRHYT----PQQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSY 466

Query: 191 AIGGKTPLEVWSGKPVTDYDSLRVFGSLVFFHVKESKLEPRAKRALFMGITSGVKGYRLW 370
           AI  KTP++VWSG P  +Y  LRVFG   + HV   KLEPRA + +F+G +SGVKGY+LW
Sbjct: 467 AIDKKTPIKVWSGFP-ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLW 525

Query: 371 CLESKKILFSRDVTFDEHAML--KTVTSEKTDSALQQVERTPKQ 496
           C E+KK++ SR+V F E  ML  K  T+   +S  +   + PK+
Sbjct: 526 CPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQFPKR 569