BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00027267
         (655 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    56   5e-11
ref|XP_006452009.1| hypothetical protein CICLE_v10009143mg [Citr...    46   4e-07
ref|XP_004291318.1| PREDICTED: F-box protein SKIP23-like [Fragar...    48   5e-07
ref|XP_002300674.2| hypothetical protein POPTR_0002s01590g [Popu...    46   4e-06
gb|EMJ20524.1| hypothetical protein PRUPE_ppa019156mg [Prunus pe...    49   4e-06
ref|XP_006419539.1| hypothetical protein CICLE_v10007176mg, part...    43   4e-06

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 56.2 bits (134), Expect(2) = 5e-11
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
 Frame = +2

Query: 362 GNHAIFVSDNFSMSINAPDRFNCKSNCIYFVGKEMERRWPYREVNVDVGVYTVTDGNSEP 541
           G+ A+F+ +N S+S++A D   C  NCIY+    ++  +     + D+G++ + D   EP
Sbjct: 314 GDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEP 373

Query: 542 L-CRGPQF--PLYYSFPLWVMP 598
           L C    F  PL +S PLWV P
Sbjct: 374 LPCYPRNFTSPLQWSPPLWVSP 395



 Score = 37.4 bits (85), Expect(2) = 5e-11
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
 Frame = +1

Query: 4   GYSSWKSIKDSSHAGFIDVTYVKDQIIALCDMGSLVVIDIDGLSVIDINGPHPPEHIALS 183
           G  SW S+ +++ +   DV +V     A+   G +V+ DI   S         P    + 
Sbjct: 198 GDKSW-SLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDS---------PRVSFME 247

Query: 184 FP-QWDWDQLFLVESSGDLWMV-------YQXXXXXXXXXXXDQSMEFVAYSFDFNKKRW 339
            P Q   D  +LV S  +L +V       Y+            +++ F  +  D+N  +W
Sbjct: 248 TPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQW 307

Query: 340 IRMSNLGRKS 369
           +RMS LG K+
Sbjct: 308 LRMSTLGDKA 317


>ref|XP_006452009.1| hypothetical protein CICLE_v10009143mg [Citrus clementina]
           gi|568820307|ref|XP_006464664.1| PREDICTED: putative
           F-box protein At5g55150-like [Citrus sinensis]
           gi|557555235|gb|ESR65249.1| hypothetical protein
           CICLE_v10009143mg [Citrus clementina]
          Length = 279

 Score = 45.8 bits (107), Expect(2) = 4e-07
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
 Frame = +2

Query: 362 GNHAIFVSDNFSMSINAPDRFNCKSNCIYFVGKEMERRW-----PYREV-NVDVGVYTVT 523
           GN ++F+  N S+S++A     CK NCIYF    ++  W      Y E    D G+Y + 
Sbjct: 194 GNRSLFLGFNSSLSVDASSNSECKPNCIYFTDDFVDSYWYLAAEEYVEAGGKDTGIYNME 253

Query: 524 DGNSEP 541
           +G+ EP
Sbjct: 254 NGSIEP 259



 Score = 34.7 bits (78), Expect(2) = 4e-07
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 9/132 (6%)
 Frame = +1

Query: 1   PGYSSWKSIKDSSHAG-FIDVTYVKDQIIALCDMGSLVVIDIDGLSVIDINGPHPPEHIA 177
           PG   W+ I  S++A  F+D  Y ++Q  A+   G +  +  D  +   I        + 
Sbjct: 72  PGGQVWRKINTSNNAKHFVDAIYFQNQFYAINAFGQIFAVKDDDSTATRI------AELP 125

Query: 178 LSFPQWDWDQLFLVESS-GDLWMVYQXXXXXXXXXXXDQSME-------FVAYSFDFNKK 333
             F +   + L++VES  G L++V +             + E       F  +  D +  
Sbjct: 126 AEFIEDVVEYLYMVESEDGTLFVVSRRGVQVPPTHLGYLTEENTFRTLGFQVFEVDLSTN 185

Query: 334 RWIRMSNLGRKS 369
           +W ++ NLG +S
Sbjct: 186 KWSKIQNLGNRS 197


>ref|XP_004291318.1| PREDICTED: F-box protein SKIP23-like [Fragaria vesca subsp. vesca]
          Length = 398

 Score = 48.1 bits (113), Expect(2) = 5e-07
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
 Frame = +2

Query: 362 GNHAIFVSDNFSMSINAPDRFNCKSNCIYFVGKEMERRWPYREVNVDVGVYTVTDGNSE- 538
           G+  +F+ +N S S++A D   C  NCIYF     E  +       D G++ + DG  + 
Sbjct: 311 GDRMLFIGENSSFSLSASDFPGCVGNCIYFTDDYSELNYESGVGGYDSGIFRLRDGMIQE 370

Query: 539 --PLCRGPQFPLYY---SFPLWVMP 598
             P  R   + +++   S PLWV+P
Sbjct: 371 LPPYPRNSDYQVHWPPGSLPLWVIP 395



 Score = 32.0 bits (71), Expect(2) = 5e-07
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
 Frame = +1

Query: 100 GSLVVIDIDGL-SVIDINGPHPPEHIALSFPQWDWDQLFLVESSGDLWMVYQXXXXXXXX 276
           G    +D  G+ +  D+ GP P   I  +    D D  +LV S  DL +V +        
Sbjct: 219 GLFYAVDNHGIVAECDVKGPSPVVRIIQTPRLDDADMRYLVNSGADLLLVSRYLDVDHDI 278

Query: 277 XXXDQSMEFVAYSFDFNK-----KRWIRMSNLG 360
              D ++ +    FD  +      RW ++ NLG
Sbjct: 279 VNDDANVNYRTVGFDVFRMNWMGPRWEKVENLG 311


>ref|XP_002300674.2| hypothetical protein POPTR_0002s01590g [Populus trichocarpa]
           gi|550344063|gb|EEE79947.2| hypothetical protein
           POPTR_0002s01590g [Populus trichocarpa]
          Length = 393

 Score = 46.2 bits (108), Expect(2) = 4e-06
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
 Frame = +2

Query: 350 VTWEGNHAIFVSDNFSMSINAPDRFNCKSNCIYFVGKEMERRWPYREVNVDVGVYTVTDG 529
           VT  G+  +F+ +N S++++A     C  +CIY+        +       D+G++ ++DG
Sbjct: 305 VTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDG 364

Query: 530 NSEPL-C--RGPQFPLYYSFPLWVMP 598
           + EPL C  R     L +  PLW+ P
Sbjct: 365 SIEPLPCYPRNSYSRLQWPPPLWISP 390



 Score = 30.8 bits (68), Expect(2) = 4e-06
 Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
 Frame = +1

Query: 4   GYSSWKSIKDSSHAGFIDVTYVKDQIIALCDMGSLVVIDIDGLSVIDINGPHPPEHIALS 183
           G   W +I ++S +   DV Y      A+   G +VV D++G S         P+   + 
Sbjct: 199 GDECW-NIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNS---------PKVSFIE 248

Query: 184 FP-QWDWDQLFLVESSGDLWMVYQXXXXXXXXXXXD-QSMEFVAYSFDFNKKRWIRMSNL 357
            P Q   D  +LV S   L +V +             ++  F  +  D N  RW R+++L
Sbjct: 249 TPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSL 308

Query: 358 G 360
           G
Sbjct: 309 G 309


>gb|EMJ20524.1| hypothetical protein PRUPE_ppa019156mg [Prunus persica]
          Length = 374

 Score = 48.5 bits (114), Expect(2) = 4e-06
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
 Frame = +2

Query: 362 GNHAIFVSDNFSMSINAPDRFNCKSNCIYFVGKEMERRWPYREVNV-DVGVYTV-TDGNS 535
           G+ AIFV DN S+ + A + + C+SNCIYF       R  ++     D+GVY + T   +
Sbjct: 290 GDAAIFVGDNSSIYVVASNDYGCQSNCIYFTHDHYRIRMDFKPWGPNDIGVYNIKTRSIA 349

Query: 536 EPLCRG--PQFPLYYSFPLWVMPT 601
           +P  +       L    P+W++PT
Sbjct: 350 QPFTKDAMTMMKLMNRPPIWIVPT 373



 Score = 28.5 bits (62), Expect(2) = 4e-06
 Identities = 29/120 (24%), Positives = 48/120 (40%)
 Frame = +1

Query: 1   PGYSSWKSIKDSSHAGFIDVTYVKDQIIALCDMGSLVVIDIDGLSVIDINGPHPPEHIAL 180
           PG  +  +  D S +   +V  ++D+  A+   G+L  +  DG+     N     E  A 
Sbjct: 179 PGKDTTWTYVDQSWSLIEEVVPIRDKFYAVDRWGNL--LSFDGVDQFKCN----VESKAN 232

Query: 181 SFPQWDWDQLFLVESSGDLWMVYQXXXXXXXXXXXDQSMEFVAYSFDFNKKRWIRMSNLG 360
           +  Q    +  +  +  D  MV +             +MEF  + F F K  WI  +NLG
Sbjct: 233 NTEQTSEKKYLVALNEKDFLMVERYTTWDDDSKR--DTMEFKVFEFSFAKCDWIETNNLG 290


>ref|XP_006419539.1| hypothetical protein CICLE_v10007176mg, partial [Citrus clementina]
           gi|557521412|gb|ESR32779.1| hypothetical protein
           CICLE_v10007176mg, partial [Citrus clementina]
          Length = 218

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = +2

Query: 365 NHAIFVSDNFSMSINAPDRFNCKSNCIYFVGKEMERRWPYREV------NVDVGVYTVTD 526
           N +IF+  N S+S++   +  CK+NCIYF     E  W   E         D+G+Y + D
Sbjct: 135 NRSIFLGHNSSLSLDVSSKPRCKTNCIYFTDDYGEGYWYMHEEEHTEFGGKDMGIYNLQD 194

Query: 527 GNS 535
           G +
Sbjct: 195 GTN 197



 Score = 34.3 bits (77), Expect(2) = 4e-06
 Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 9/132 (6%)
 Frame = +1

Query: 1   PGYSSWKSIKDSSHAGFIDVTYVKDQIIALCDMGSLVVIDIDGLSVIDINGPHPPEHIAL 180
           PG  +W  + ++ H+ F DV   +DQ  A+   G   +  IDG      + P P      
Sbjct: 13  PGDEAWTKVNNTEHSSFGDVICNRDQYYAI--NGDTEIFAIDGDVARSASAPLPD----- 65

Query: 181 SFPQWDWDQLFLV---ESSGDLWMVYQXXXXXXXXXXXDQS-MEFVAYSFD-----FNKK 333
              +   + L+LV   +S   LW+V +           ++  + +  Y F         K
Sbjct: 66  GLRRQKQECLYLVGSEDSDRKLWVVSREGVDLRPVHPGNEDVLHYGTYGFQVFEVYLGTK 125

Query: 334 RWIRMSNLGRKS 369
           RW  + NL  +S
Sbjct: 126 RWKEIKNLANRS 137