BLASTX nr result

ID: Rehmannia26_contig00027248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00027248
         (536 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006375703.1| hypothetical protein POPTR_0013s00270g [Popu...    79   5e-13
ref|XP_006480331.1| PREDICTED: flap endonuclease 1-like isoform ...    78   1e-12
ref|XP_006480329.1| PREDICTED: flap endonuclease 1-like isoform ...    78   1e-12
ref|XP_006423952.1| hypothetical protein CICLE_v10028527mg [Citr...    78   1e-12
emb|CBI39682.3| unnamed protein product [Vitis vinifera]               76   4e-12
ref|XP_006358513.1| PREDICTED: flap endonuclease 1-like isoform ...    76   6e-12
gb|EOY11795.1| 5'-3' exonuclease family protein isoform 5, parti...    72   8e-11
ref|XP_004495821.1| PREDICTED: flap endonuclease 1-like isoform ...    60   4e-07
ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arab...    57   3e-06

>ref|XP_006375703.1| hypothetical protein POPTR_0013s00270g [Populus trichocarpa]
           gi|550324613|gb|ERP53500.1| hypothetical protein
           POPTR_0013s00270g [Populus trichocarpa]
          Length = 417

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
 Frame = -3

Query: 534 TKAIEKIKTAKNKSSRGRFESFVKPVVGTLGPAEGKGSRCVLAVPKPVMKLNKYFIGAYF 355
           TKAIEKIK AKNKSS+GR ESF KPV  T  P + KG++CVL  PKP +KL    +    
Sbjct: 324 TKAIEKIKAAKNKSSQGRLESFFKPVANTSQPVKRKGTKCVLRPPKPAIKLKMLSLQVCS 383

Query: 354 HS---KAIGSIGLSSVDLRSNQSMLFSRNLCCGA 262
            +   K IGS+ + +++L S  S    R +C  A
Sbjct: 384 STSVPKTIGSLSMLTLNLFSKHSTTSPRGVCFSA 417


>ref|XP_006480331.1| PREDICTED: flap endonuclease 1-like isoform X3 [Citrus sinensis]
          Length = 396

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
 Frame = -3

Query: 534 TKAIEKIKTAKNKSSRGRFESFVKPVVGTLGPAEGKGSRCVLAVPKPVMKLNKYFIGAYF 355
           TKAIEKIK AKNKSS+GR ESF KPV  T  P + KGS+CVL  PK  +K   + + A +
Sbjct: 304 TKAIEKIKAAKNKSSQGRLESFFKPVANTSAPIKRKGSKCVLQSPKQEIKPRIFSLQACY 363

Query: 354 HS--KAIGSIGLSSVDLRSNQSMLFSRNLCCGA 262
            S  K  G + L ++DL S  S    R +C  A
Sbjct: 364 SSGPKLNGGLCLLTLDLGSKHSSPLGRGVCFSA 396


>ref|XP_006480329.1| PREDICTED: flap endonuclease 1-like isoform X1 [Citrus sinensis]
          Length = 418

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
 Frame = -3

Query: 534 TKAIEKIKTAKNKSSRGRFESFVKPVVGTLGPAEGKGSRCVLAVPKPVMKLNKYFIGAYF 355
           TKAIEKIK AKNKSS+GR ESF KPV  T  P + KGS+CVL  PK  +K   + + A +
Sbjct: 326 TKAIEKIKAAKNKSSQGRLESFFKPVANTSAPIKRKGSKCVLQSPKQEIKPRIFSLQACY 385

Query: 354 HS--KAIGSIGLSSVDLRSNQSMLFSRNLCCGA 262
            S  K  G + L ++DL S  S    R +C  A
Sbjct: 386 SSGPKLNGGLCLLTLDLGSKHSSPLGRGVCFSA 418


>ref|XP_006423952.1| hypothetical protein CICLE_v10028527mg [Citrus clementina]
           gi|567862598|ref|XP_006423953.1| hypothetical protein
           CICLE_v10028527mg [Citrus clementina]
           gi|568853361|ref|XP_006480330.1| PREDICTED: flap
           endonuclease 1-like isoform X2 [Citrus sinensis]
           gi|557525886|gb|ESR37192.1| hypothetical protein
           CICLE_v10028527mg [Citrus clementina]
           gi|557525887|gb|ESR37193.1| hypothetical protein
           CICLE_v10028527mg [Citrus clementina]
          Length = 416

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
 Frame = -3

Query: 534 TKAIEKIKTAKNKSSRGRFESFVKPVVGTLGPAEGKGSRCVLAVPKPVMKLNKYFIGAYF 355
           TKAIEKIK AKNKSS+GR ESF KPV  T  P + KGS+CVL  PK  +K   + + A +
Sbjct: 324 TKAIEKIKAAKNKSSQGRLESFFKPVANTSAPIKRKGSKCVLQSPKQEIKPRIFSLQACY 383

Query: 354 HS--KAIGSIGLSSVDLRSNQSMLFSRNLCCGA 262
            S  K  G + L ++DL S  S    R +C  A
Sbjct: 384 SSGPKLNGGLCLLTLDLGSKHSSPLGRGVCFSA 416


>emb|CBI39682.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = -3

Query: 534 TKAIEKIKTAKNKSSRGRFESFVKPVVGTLGPAEGKGSRCVLAVPKPVMKLNKYFIGAYF 355
           TKAIEKIKTAKNKSS+GR ESF KPVV +  P + K S+C+L  PKP++K   +      
Sbjct: 324 TKAIEKIKTAKNKSSQGRLESFFKPVVSSSIPIKRKESKCMLGSPKPIIKHKIFTQQVCI 383

Query: 354 HSK--AIGSIGLSSVDLRSNQSMLFSRNLCCGA 262
            S+   IGS  + ++ L S  S    R +C GA
Sbjct: 384 QSRRYIIGSSSMPTLGLGSKHSTPLFRGVCFGA 416


>ref|XP_006358513.1| PREDICTED: flap endonuclease 1-like isoform X1 [Solanum tuberosum]
          Length = 411

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 43/90 (47%), Positives = 56/90 (62%)
 Frame = -3

Query: 534 TKAIEKIKTAKNKSSRGRFESFVKPVVGTLGPAEGKGSRCVLAVPKPVMKLNKYFIGAYF 355
           TKAIEKIKTAKNKSS+GR ESF KP V T  P + KG++CVL  P PV K     + +  
Sbjct: 324 TKAIEKIKTAKNKSSQGRLESFFKP-VSTSAPVKRKGTKCVLVSPIPVTKFKTLSLRS-- 380

Query: 354 HSKAIGSIGLSSVDLRSNQSMLFSRNLCCG 265
               +G +   S++L  N S+  SR++C G
Sbjct: 381 RPGVLGKLSFPSLELGLNYSVPLSRHVCFG 410


>gb|EOY11795.1| 5'-3' exonuclease family protein isoform 5, partial [Theobroma
           cacao]
          Length = 414

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = -3

Query: 534 TKAIEKIKTAKNKSSRGRFESFVKPVVGTLGPAEGKGSRCVLAVPKPVM--KLNKYFIGA 361
           TKAIEKIK AKNKSS+GR ESF KPV  T  P + KG++C+L  PKP++  K+    +  
Sbjct: 324 TKAIEKIKAAKNKSSQGRLESFFKPVGNTSIPIKRKGTKCMLQFPKPMLKSKILSPQVCK 383

Query: 360 YFHSKAIGSIGLSSVDLRSNQSMLFSRNLCCG 265
           +   K  GS+     D +   S  FSR +C G
Sbjct: 384 FSRPKGFGSMPTLGPDFK--HSAAFSRGVCFG 413


>ref|XP_004495821.1| PREDICTED: flap endonuclease 1-like isoform X1 [Cicer arietinum]
           gi|502117443|ref|XP_004495822.1| PREDICTED: flap
           endonuclease 1-like isoform X2 [Cicer arietinum]
          Length = 409

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = -3

Query: 534 TKAIEKIKTAKNKSSRGRFESFVKPVVGTLGPAEGKGSRCVLAVPKPVM--KLNKYFIGA 361
           TKAIEKIK AKNKSS+GR ESF KP   T  P + K S+C+L   KP +  K++   I  
Sbjct: 324 TKAIEKIKAAKNKSSQGRLESFFKPTANTSVPIKRKESKCMLRSFKPAIDHKMSSLQISN 383

Query: 360 YFHSKAIGSIGLSSVDLRSNQSM 292
           +      G + +   +L S  S+
Sbjct: 384 WSRPMIFGKLSMPVYNLGSKLSV 406


>ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
           lyrata] gi|297320152|gb|EFH50574.1| hypothetical protein
           ARALYDRAFT_489493 [Arabidopsis lyrata subsp. lyrata]
          Length = 448

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 534 TKAIEKIKTAKNKSSRGRFESFVKPVVGTLGPAEGKGSRCVLAVPKPV 391
           TKAIEKIKTAKNKSS+GR ESF KPV  +  PA+ KG+   L V + +
Sbjct: 324 TKAIEKIKTAKNKSSQGRLESFFKPVANSSVPAKRKGNLICLVVSEVI 371


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