BLASTX nr result
ID: Rehmannia26_contig00027073
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00027073
(353 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [... 106 3e-21
gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum... 105 6e-21
gb|AHB24929.1| chloroplast light-harvesting complex II chlorophy... 104 1e-20
sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding pro... 104 1e-20
gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum... 104 1e-20
gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum... 104 1e-20
sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding pro... 104 1e-20
ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3... 103 2e-20
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ... 103 2e-20
ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3... 103 2e-20
sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding pro... 103 3e-20
ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3... 103 3e-20
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot... 103 3e-20
gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyac... 103 3e-20
dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein... 102 4e-20
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245... 102 4e-20
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3... 102 4e-20
ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3... 102 4e-20
ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3... 102 4e-20
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr... 102 4e-20
>gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [Sedum alfredii]
Length = 267
Score = 106 bits (265), Expect = 3e-21
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1
Query: 272 ASMAATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRV 93
AS A S L TAS+ + GR VTMR T K +P SPWYGPDRV
Sbjct: 3 ASTMALSSLSLAGQAVKTASSASEVFGSGR-----VTMRKTAAKPKPSASSSPWYGPDRV 57
Query: 92 KYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
KYLGPFSGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 58 KYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 87
>gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 105 bits (262), Expect = 6e-21
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = -1
Query: 212 NNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 33
N +++ +G R +TMR T GK + + DSPWYGPDRVKYLGPFSGEAPSYLTGEFPG
Sbjct: 21 NPTTSQILGEGR---ITMRKTAGKTKNVSSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 77
Query: 32 DYGWDTAGLS 3
DYGWDTAGLS
Sbjct: 78 DYGWDTAGLS 87
>gb|AHB24929.1| chloroplast light-harvesting complex II chlorophyll a/b binding
protein 1 [Sedum alfredii]
Length = 267
Score = 104 bits (260), Expect = 1e-20
Identities = 46/55 (83%), Positives = 47/55 (85%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
VTMR T K +P SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 33 VTMRKTAAKSKPTVSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 87
>sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
Precursor gi|19819|emb|CAA36955.1| unnamed protein
product [Nicotiana tabacum]
Length = 266
Score = 104 bits (259), Expect = 1e-20
Identities = 51/87 (58%), Positives = 61/87 (70%)
Frame = -1
Query: 263 AATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVKYL 84
A+T+ P G + +S++ G + VTMR T K +P + SPWYGPDRVKYL
Sbjct: 3 ASTTALSSPFAGKAVKLSPSSSEVTGNGK---VTMRKTASKAKPVSSGSPWYGPDRVKYL 59
Query: 83 GPFSGEAPSYLTGEFPGDYGWDTAGLS 3
GPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLS 86
>gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 104 bits (259), Expect = 1e-20
Identities = 53/89 (59%), Positives = 64/89 (71%)
Frame = -1
Query: 269 SMAATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVK 90
++++ SF G + TAS +++G R +TMR GK + T DSPWYGPDRVK
Sbjct: 7 ALSSPSFAGKAVKLSPTAS-----ETLGEGR---ITMRKAAGKSKVATIDSPWYGPDRVK 58
Query: 89 YLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
YLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 59 YLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
>gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 104 bits (259), Expect = 1e-20
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
+TMR T GK + + DSPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 33 ITMRKTAGKTKSVSSDSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
>sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
Precursor gi|170212|gb|AAA34056.1| chlorophyll
a/b-binding protein-E [Nicotiana plumbaginifolia]
Length = 266
Score = 104 bits (259), Expect = 1e-20
Identities = 51/87 (58%), Positives = 61/87 (70%)
Frame = -1
Query: 263 AATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPDRVKYL 84
A+T+ P G + +S++ G + VTMR T K +P + SPWYGPDRVKYL
Sbjct: 3 ASTTALSSPFAGKAVKLSPSSSEVTGNGK---VTMRKTANKAKPVSSGSPWYGPDRVKYL 59
Query: 83 GPFSGEAPSYLTGEFPGDYGWDTAGLS 3
GPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLS 86
>ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 103 bits (258), Expect = 2e-20
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
+TMR T K +P + SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 33 ITMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 87
>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus] gi|449525484|ref|XP_004169747.1|
PREDICTED: chlorophyll a-b binding protein,
chloroplastic-like [Cucumis sativus]
Length = 267
Score = 103 bits (258), Expect = 2e-20
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
+TMR T GK +P + SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLS
Sbjct: 33 ITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 87
>ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 103 bits (257), Expect = 2e-20
Identities = 46/55 (83%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
VTMR T K +P + SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 33 VTMRKTTTKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 87
>sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
AltName: Full=LHCII type I CAB-13; Short=LHCP; Flags:
Precursor gi|20471|emb|CAA26210.1| unnamed protein
product [Petunia sp.]
Length = 266
Score = 103 bits (256), Expect = 3e-20
Identities = 51/78 (65%), Positives = 58/78 (74%), Gaps = 6/78 (7%)
Frame = -1
Query: 218 ASNNNSNKSVGRP------RMTTVTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPS 57
+S++ + K+V P R VTMR T K +P + SPWYGPDRVKYLGPFSGEAPS
Sbjct: 9 SSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPS 68
Query: 56 YLTGEFPGDYGWDTAGLS 3
YLTGEFPGDYGWDTAGLS
Sbjct: 69 YLTGEFPGDYGWDTAGLS 86
>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 103 bits (256), Expect = 3e-20
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
VTMR T K +P + SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 33 VTMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 103 bits (256), Expect = 3e-20
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
VTMR T G+ +P + SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLS
Sbjct: 33 VTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 87
>gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyacinthus orientalis]
Length = 239
Score = 103 bits (256), Expect = 3e-20
Identities = 57/94 (60%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Frame = -1
Query: 278 KMASMAATSFKGLPTLGAWTASNNNSNKSV--GRPRMTTVTMRATRGKKQPETPDSPWYG 105
++ SMA+T P+L A TA + SV G R T MR T GK + + SPWYG
Sbjct: 9 ELLSMASTMALSSPSL-AGTAVKLTPSSSVVSGDGRFT---MRKTAGKPKTVSSGSPWYG 64
Query: 104 PDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
P+RVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 65 PERVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 98
>dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 102 bits (255), Expect = 4e-20
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
VTMR T K +P + SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 33 VTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
lycopersicum]
Length = 554
Score = 102 bits (255), Expect = 4e-20
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
+TMR T K +P + SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 33 ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
Score = 102 bits (255), Expect = 4e-20
Identities = 54/92 (58%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -1
Query: 269 SMAATSFKGLPT---LGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETPDSPWYGPD 99
S+ ATS L + G + +S++ G R VTMR T K +P + SPWYGPD
Sbjct: 286 SIMATSTMALSSSTFAGKAVKLSPSSSEITGNGR---VTMRKTATKAKPASSGSPWYGPD 342
Query: 98 RVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
RVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 343 RVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 374
>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 6 [Solanum lycopersicum]
Length = 244
Score = 102 bits (255), Expect = 4e-20
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
+TMR T K +P + SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 33 ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
>ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 5 [Solanum lycopersicum]
Length = 255
Score = 102 bits (255), Expect = 4e-20
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
+TMR T K +P + SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 33 ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
>ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Solanum lycopersicum]
gi|460376546|ref|XP_004234059.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 2
[Solanum lycopersicum] gi|460376548|ref|XP_004234060.1|
PREDICTED: chlorophyll a-b binding protein 3C,
chloroplastic-like isoform 3 [Solanum lycopersicum]
gi|460376550|ref|XP_004234061.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 4
[Solanum lycopersicum]
Length = 267
Score = 102 bits (255), Expect = 4e-20
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
+TMR T K +P + SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 33 ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
oleracea]
Length = 267
Score = 102 bits (255), Expect = 4e-20
Identities = 46/55 (83%), Positives = 48/55 (87%)
Frame = -1
Query: 167 VTMRATRGKKQPETPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 3
VTMR T GK + + SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 33 VTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 87