BLASTX nr result
ID: Rehmannia26_contig00026318
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00026318
(385 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protei... 76 4e-12
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] 73 3e-11
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 73 3e-11
ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutr... 70 2e-10
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 70 2e-10
gb|EOY16919.1| Whirly 2, putative isoform 2 [Theobroma cacao] 70 3e-10
gb|EOY16918.1| Whirly 2, putative isoform 1 [Theobroma cacao] 70 3e-10
ref|XP_004290267.1| PREDICTED: LOW QUALITY PROTEIN: single-stran... 70 3e-10
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 70 4e-10
ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutr... 69 6e-10
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 67 2e-09
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 67 2e-09
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 67 2e-09
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 66 4e-09
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258... 66 4e-09
emb|CAN74120.1| hypothetical protein VITISV_034895 [Vitis vinifera] 66 4e-09
ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Popu... 66 6e-09
gb|ESW19224.1| hypothetical protein PHAVU_006G106800g [Phaseolus... 65 7e-09
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb... 65 7e-09
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps... 65 1e-08
>ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 240
Score = 76.3 bits (186), Expect = 4e-12
Identities = 46/100 (46%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = -1
Query: 295 MFKLSKLLLQSSRDPLPLRSLVGAAT--NDFKLLRCITTQTGTSTAMPKFGSDGKPTART 122
M KLS+ LL SSR L + L G A D + +Q G ST + G R
Sbjct: 1 MMKLSRSLL-SSRSQLSEKLLAGEANYVRDGLKSHVLISQAGMSTTGHDVSAKGSLGGRI 59
Query: 121 FAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
FAPY +YKGKAA S DP+LP F +L+SGD +V+R+GVI+L
Sbjct: 60 FAPYYVYKGKAAFSVDPVLPTFMKLDSGDLKVKRKGVILL 99
>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
Length = 238
Score = 73.2 bits (178), Expect = 3e-11
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = -1
Query: 295 MFKLSKLLLQSSRDPLPLRSLVGAATNDFKLLRCITTQTGTSTAMPKFGSD-GKPTARTF 119
M K+S+LL R+ L + L G I T G ST +D GK R F
Sbjct: 1 MLKVSRLL--HPRNQLLHKKLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVF 58
Query: 118 APYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
APYS++KGKAALSA+P LP F++L+SG ++ RRGVIML
Sbjct: 59 APYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIML 97
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 73.2 bits (178), Expect = 3e-11
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = -1
Query: 295 MFKLSKLLLQSSRDPLPLRSLVGAATNDFKLLRCITTQTGTSTAMPKFGSD-GKPTARTF 119
M K+S+LL R+ L + L G I T G ST +D GK R F
Sbjct: 1 MLKVSRLL--HPRNQLLHKKLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVF 58
Query: 118 APYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
APYS++KGKAALSA+P LP F++L+SG ++ RRGVIML
Sbjct: 59 APYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIML 97
>ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087222|gb|ESQ28074.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 241
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 8/99 (8%)
Frame = -1
Query: 274 LLQSSRDPLPLRSLVGAATN----DFKL--LRCITTQTGTSTAMPKF-GSDG-KPTARTF 119
+++ +R L RSL + + +FK+ LR T+ +ST+ F G D KP+ R F
Sbjct: 1 MMKQARTLLSSRSLCDQSKSLFEGNFKVSPLRGFATRADSSTSARGFSGKDAAKPSGRVF 60
Query: 118 APYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
APY+I+KGKAALS +P+LP F+++E G+ R++RRG +M+
Sbjct: 61 APYAIFKGKAALSVEPVLPTFARIEPGNLRIDRRGSVMM 99
>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 235
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/64 (54%), Positives = 44/64 (68%)
Frame = -1
Query: 193 ITTQTGTSTAMPKFGSDGKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRG 14
I T ST +DGK R FAPYS++KGKAALSA+P LP F++L+SG ++ RRG
Sbjct: 31 INTFAAFSTVRQDVVADGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRG 90
Query: 13 VIML 2
VIML
Sbjct: 91 VIML 94
>gb|EOY16919.1| Whirly 2, putative isoform 2 [Theobroma cacao]
Length = 198
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = -1
Query: 187 TQTGTSTAMPKFGSDGKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVI 8
++ ST++ F S G TAR APY++YKGKAA S PLLP FS+++SG+ +++RRG +
Sbjct: 34 SRAAISTSIHDFASKGNSTARVIAPYTVYKGKAAFSVTPLLPTFSKIDSGNLKLDRRGAM 93
Query: 7 ML 2
ML
Sbjct: 94 ML 95
>gb|EOY16918.1| Whirly 2, putative isoform 1 [Theobroma cacao]
Length = 236
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = -1
Query: 187 TQTGTSTAMPKFGSDGKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVI 8
++ ST++ F S G TAR APY++YKGKAA S PLLP FS+++SG+ +++RRG +
Sbjct: 34 SRAAISTSIHDFASKGNSTARVIAPYTVYKGKAAFSVTPLLPTFSKIDSGNLKLDRRGAM 93
Query: 7 ML 2
ML
Sbjct: 94 ML 95
>ref|XP_004290267.1| PREDICTED: LOW QUALITY PROTEIN: single-stranded DNA-bindig protein
WHY2, mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 231
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = -1
Query: 202 LRCITTQTGTSTAMPKFGSDGKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVE 23
L T TG STA F + G+ + +AP+SIYKGKAALS P+LP F++LE+G VE
Sbjct: 25 LDAFTQSTGFSTARQNFSAKGRIGNQIYAPFSIYKGKAALSLSPILPTFTKLETGSVVVE 84
Query: 22 RRGVIML 2
RRG +ML
Sbjct: 85 RRGSVML 91
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 1 [Solanum lycopersicum]
Length = 238
Score = 69.7 bits (169), Expect = 4e-10
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = -1
Query: 295 MFKLSKLLLQSSRDPLPLRSLVGAATNDFKLLRCITTQTGTSTAMPKFGSD-GKPTARTF 119
M K+S+LL R+ L + L G I T ST +D GK R F
Sbjct: 1 MLKVSRLL--HPRNQLLHKKLSGEDVKGSIWQNAINTFAAFSTVRQDVVADAGKREGRVF 58
Query: 118 APYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
APYS++KGKAALSA+P LP F++L+SG ++ RRGVIML
Sbjct: 59 APYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIML 97
>ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087221|gb|ESQ28073.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 240
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = -1
Query: 202 LRCITTQTGTSTAMPKF-GSDG-KPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYR 29
LR T+ +ST+ F G D KP+ R FAPY+I+KGKAALS +P+LP F+++E G+ R
Sbjct: 30 LRGFATRADSSTSARGFSGKDAAKPSGRVFAPYAIFKGKAALSVEPVLPTFARIEPGNLR 89
Query: 28 VERRGVIML 2
++RRG +M+
Sbjct: 90 IDRRGSVMM 98
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Frame = -1
Query: 241 RSLVGAATNDFKLLRCITTQTGTSTAMPKF-GSDG-KPTARTFAPYSIYKGKAALSADPL 68
+SL A+T LR + + +ST F G D KP+ R FAPYSI+KGKAALS +P+
Sbjct: 17 KSLFEAST-----LRGFASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPV 71
Query: 67 LPMFSQLESGDYRVERRGVIML 2
LP F++++SG+ R++RRG +M+
Sbjct: 72 LPSFTEIDSGNLRIDRRGSLMM 93
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 4/62 (6%)
Frame = -1
Query: 175 TSTAMPKFGSDGK----PTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVI 8
+S++ P G GK P+ R FAPYSI+KGKAALS +P+LP F++++SG+ R++RRG +
Sbjct: 37 SSSSTPGRGFSGKDAPKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSL 96
Query: 7 ML 2
M+
Sbjct: 97 MM 98
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Frame = -1
Query: 241 RSLVGAATNDFKLLRCITTQTGTSTAMPKF-GSDG-KPTARTFAPYSIYKGKAALSADPL 68
+SL A+T LR + + +ST F G D KP+ R FAPYSI+KGKAALS +P+
Sbjct: 18 KSLFEAST-----LRGFASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPV 72
Query: 67 LPMFSQLESGDYRVERRGVIML 2
LP F++++SG+ R++RRG +M+
Sbjct: 73 LPSFTEIDSGNLRIDRRGSLMM 94
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 66.2 bits (160), Expect = 4e-09
Identities = 27/46 (58%), Positives = 40/46 (86%)
Frame = -1
Query: 139 KPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
KP+ R FAPYSI+KGKAALS +P+LP F++++SG+ R++RRG +M+
Sbjct: 6 KPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMM 51
>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
gi|297734756|emb|CBI16990.3| unnamed protein product
[Vitis vinifera]
Length = 231
Score = 66.2 bits (160), Expect = 4e-09
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = -1
Query: 295 MFKLSKLLLQSSRDPLPLRSLVGAATNDFK---LLRCITTQTGTSTAMPKFGSDGKPTAR 125
M KL +LL SR L +L+ D + L T++ STA F G R
Sbjct: 1 MMKLKQLL--QSRTHLS-ENLLHGKPGDIRNPSWLHAFTSRVSLSTATDHFADKGNYPDR 57
Query: 124 TFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
+APY +YKGKA+L+ P+LP FS+L+SG +V+R GV+ML
Sbjct: 58 VYAPYCVYKGKASLTVYPVLPKFSRLDSGGLKVDRHGVMML 98
>emb|CAN74120.1| hypothetical protein VITISV_034895 [Vitis vinifera]
Length = 185
Score = 66.2 bits (160), Expect = 4e-09
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = -1
Query: 295 MFKLSKLLLQSSRDPLPLRSLVGAATNDFK---LLRCITTQTGTSTAMPKFGSDGKPTAR 125
M KL +LL SR L +L+ D + L T++ STA F G R
Sbjct: 1 MMKLKQLL--QSRTHLS-ENLLHGKPGDIRNPSWLHAFTSRVSLSTATDHFADKGNYPDR 57
Query: 124 TFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
+APY +YKGKA+L+ P+LP FS+L+SG +V+R GV+ML
Sbjct: 58 VYAPYCVYKGKASLTVYPVLPKFSRLDSGGLKVDRHGVMML 98
>ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Populus trichocarpa]
gi|118484514|gb|ABK94132.1| unknown [Populus
trichocarpa] gi|550342417|gb|EEE78292.2| hypothetical
protein POPTR_0003s04700g [Populus trichocarpa]
Length = 229
Score = 65.9 bits (159), Expect = 6e-09
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = -1
Query: 295 MFKLSKLLLQSSRDPLPLRSLVGAATN--DFKLLRCITTQTGTSTAMPKFGSDGKPTART 122
M KLS+ L + R+ VG T+ D L +T Q ST G R
Sbjct: 1 MMKLSRFLNFN-------RNAVGKPTDVRDGSALHALTFQASIST-----GGKSSIQDRV 48
Query: 121 FAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
FAPYS++KGKAALS +P+LP FS+ SG+ RV+RRG +ML
Sbjct: 49 FAPYSVFKGKAALSVEPVLPTFSKFGSGNLRVDRRGSMML 88
>gb|ESW19224.1| hypothetical protein PHAVU_006G106800g [Phaseolus vulgaris]
Length = 243
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Frame = -1
Query: 295 MFKLSKLLLQSSRDPLPLRSLVGAAT----NDFKLLRCITTQTGTSTAMPKFGSDGKPTA 128
MFKLS++L ++ L + + + + R T G STA + + G +
Sbjct: 1 MFKLSRVLHLTTTSRHRLLEVFSSRNVEVGDSLRDRRDFTYSAGISTATNNYAAKGYASD 60
Query: 127 RTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
R FAPY++YKGKAA S P LP F++L+SG V+RRG +M+
Sbjct: 61 RIFAPYTVYKGKAAFSLSPCLPTFTKLDSGTVVVDRRGSMMI 102
>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
A, Crystal Structure Of A Stwhy2-Ere32 Complex
gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
Crystal Structure Of A Stwhy2-Cere32 Complex
gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
Stwhy2-Rcere32 Complex
Length = 178
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = -1
Query: 142 GKPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
GK R FAPYS++KGKAALSA+P LP F++L+SG ++ RRGVIML
Sbjct: 5 GKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIML 51
>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571469|gb|EOA35657.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 235
Score = 64.7 bits (156), Expect = 1e-08
Identities = 26/46 (56%), Positives = 40/46 (86%)
Frame = -1
Query: 139 KPTARTFAPYSIYKGKAALSADPLLPMFSQLESGDYRVERRGVIML 2
KP+ R FAPY+I+KGKAALS +P+LP F++++SG+ R++RRG +M+
Sbjct: 47 KPSGRVFAPYAIFKGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMM 92