BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00026162
         (600 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...    92   1e-16
ref|XP_004240282.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_006360650.1| PREDICTED: pentatricopeptide repeat-containi...    88   2e-15
ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containi...    88   2e-15
gb|EMJ23653.1| hypothetical protein PRUPE_ppa006191mg [Prunus pe...    84   4e-14
ref|XP_004301396.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|5...    73   5e-11
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-09
gb|ABA18097.1| pentatricopeptide repeat protein [Olimarabidopsis...    67   3e-09
ref|XP_006453186.1| hypothetical protein CICLE_v10010414mg [Citr...    65   1e-08
gb|EOY32179.1| Pentatricopeptide repeat superfamily protein, put...    65   1e-08
gb|ABA18111.1| pentatricopeptide repeat protein [Arabidopsis are...    65   1e-08
ref|XP_006381168.1| hypothetical protein POPTR_0006s07800g [Popu...    65   2e-08
ref|XP_006372218.1| hypothetical protein POPTR_0018s14360g [Popu...    64   2e-08
ref|XP_006573403.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_006418860.1| hypothetical protein EUTSA_v10003041mg [Eutr...    62   9e-08
ref|NP_566863.2| pentatricopeptide repeat-containing protein [Ar...    62   2e-07
emb|CAB86446.1| putative protein [Arabidopsis thaliana]                62   2e-07
gb|ESW04320.1| hypothetical protein PHAVU_011G085400g [Phaseolus...    61   2e-07
ref|XP_006307633.1| hypothetical protein CARUB_v10009261mg [Caps...    61   2e-07

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 56/118 (47%), Positives = 74/118 (62%)
 Frame = +3

Query: 246 WKENLW*CLEQSLQGKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLL 425
           WK+      E+S+ GK D+YVD         LI   S  R+RLP    + ++E KSEG L
Sbjct: 43  WKQ------ERSVDGK-DNYVDYTP------LIQALS--RKRLPHVAQELLFEMKSEGFL 87

Query: 426 PDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMVT 599
           P++STLS L+L YA NGLF KA  +WDE++NSSF P+ ++VS+LI  YG M  F  VT
Sbjct: 88  PNNSTLSALMLCYADNGLFPKAQALWDEIINSSFGPNIQIVSKLIDAYGKMGHFGEVT 145


>ref|XP_004240282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Solanum lycopersicum]
          Length = 381

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 64/95 (67%)
 Frame = +3

Query: 288 GKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYA 467
           G  D  ++ RD     SLI G S  R++LP+   + V E KSEG +PD STLS L+L YA
Sbjct: 5   GNIDPRINYRDCA---SLIQGLS--RKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYA 59

Query: 468 SNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYG 572
           +NGLF KA   WDE++NSSF+PD  V++ELI IYG
Sbjct: 60  TNGLFCKALAAWDEIMNSSFLPDVHVIAELIDIYG 94


>ref|XP_006360650.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like isoform X3 [Solanum tuberosum]
          Length = 409

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 50/98 (51%), Positives = 64/98 (65%)
 Frame = +3

Query: 276 QSLQGKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSTLSVLL 455
           QS   K  +   R +  +  SLI G S  R++LP+   + V E KSEG +PD STLS L+
Sbjct: 26  QSSAQKGGNIDPRGNYADCASLIQGLS--RKKLPVAAERLVLEMKSEGFVPDSSTLSALM 83

Query: 456 LHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIY 569
           L YASNGLF KA   WDE++NSSF+PD  V++ELI IY
Sbjct: 84  LCYASNGLFYKALAAWDEIMNSSFLPDVHVIAELIDIY 121


>ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like isoform X1 [Solanum tuberosum]
           gi|565389826|ref|XP_006360649.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X2 [Solanum tuberosum]
          Length = 416

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 47/86 (54%), Positives = 60/86 (69%)
 Frame = +3

Query: 312 RRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYASNGLFDKA 491
           R +  +  SLI G S  R++LP+   + V E KSEG +PD STLS L+L YASNGLF KA
Sbjct: 45  RGNYADCASLIQGLS--RKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYASNGLFYKA 102

Query: 492 HGIWDEMLNSSFVPDAKVVSELIFIY 569
              WDE++NSSF+PD  V++ELI IY
Sbjct: 103 LAAWDEIMNSSFLPDVHVIAELIDIY 128


>gb|EMJ23653.1| hypothetical protein PRUPE_ppa006191mg [Prunus persica]
          Length = 423

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 42/78 (53%), Positives = 57/78 (73%)
 Frame = +3

Query: 363 RERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAK 542
           R+++P    + V E KS+GLLP +STLS L+L +A+NGLF +A  IWDEML+SSFVP  +
Sbjct: 67  RQKMPHVAQELVLEMKSDGLLPSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSFVPSIQ 126

Query: 543 VVSELIFIYGSMRDFDMV 596
           VVSEL   YG++  F+ V
Sbjct: 127 VVSELFDAYGNVGCFEKV 144


>ref|XP_004301396.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Fragaria vesca subsp. vesca]
          Length = 424

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 51/117 (43%), Positives = 69/117 (58%)
 Frame = +3

Query: 246 WKENLW*CLEQSLQGKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLL 425
           WK+      E+  +GK D YVD         LI   S  R+++P    + +   KSEGL+
Sbjct: 44  WKQ------EECSRGK-DCYVD------CVPLIQSLS--RQKMPHVAQEVLLVMKSEGLI 88

Query: 426 PDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 596
           P +STLS ++L +A NGL  +A  IWDEMLNSSFVP  +VVSEL  +YG++  F  V
Sbjct: 89  PSNSTLSAVMLCHAKNGLLPQAEAIWDEMLNSSFVPGIQVVSELFDVYGNVGSFGKV 145


>ref|XP_002331436.1| predicted protein [Populus trichocarpa]
           gi|566215849|ref|XP_006372219.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|550318750|gb|ERP50016.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 428

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
 Frame = +3

Query: 285 QGKCDDYVDRRDAC-NSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLH 461
           Q K D  V  ++ C +  SLI      + R P    + + E K EG LPD+ TLS ++L 
Sbjct: 46  QWKRDQGVFGKETCADCASLIQTLC--KHRRPHLAEELLLELKCEGFLPDNRTLSAMMLC 103

Query: 462 YASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 596
           YA +GL  +A  IW+EML SSFVP  +V+S+LI IY     FD V
Sbjct: 104 YADSGLLPQAQAIWEEMLYSSFVPSVQVISDLIDIYAKSGLFDEV 148


>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
           gi|449507537|ref|XP_004163059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
          Length = 388

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 38/98 (38%), Positives = 56/98 (57%)
 Frame = +3

Query: 306 VDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYASNGLFD 485
           VD     N+  +I   S  R R+P+   +   E KSEG   ++STLS +++HY  +G   
Sbjct: 15  VDDSFNINNSQVIKKLS--RRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPL 72

Query: 486 KAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMVT 599
           +A  +W+EMLNS F P  +V+S+L   YG M  FD +T
Sbjct: 73  QAQAMWEEMLNSCFEPSVQVISKLFNAYGKMGHFDYIT 110


>gb|ABA18097.1| pentatricopeptide repeat protein [Olimarabidopsis pumila]
          Length = 424

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 36/78 (46%), Positives = 48/78 (61%)
 Frame = +3

Query: 363 RERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAK 542
           + RLP    +   + K + LLP+  TL  L+L +A NG   +A  IWDEMLNSSFVPD  
Sbjct: 68  QRRLPEVAYEIFIQTKLDNLLPNYRTLCALMLCFAENGFVLRARMIWDEMLNSSFVPDLL 127

Query: 543 VVSELIFIYGSMRDFDMV 596
           V+S+L+F Y  +  FD V
Sbjct: 128 VISKLVFAYEKVGCFDEV 145


>ref|XP_006453186.1| hypothetical protein CICLE_v10010414mg [Citrus clementina]
           gi|568840749|ref|XP_006474328.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X1 [Citrus sinensis]
           gi|568840751|ref|XP_006474329.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X2 [Citrus sinensis]
           gi|568840753|ref|XP_006474330.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X3 [Citrus sinensis]
           gi|568840755|ref|XP_006474331.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X4 [Citrus sinensis]
           gi|568840757|ref|XP_006474332.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X5 [Citrus sinensis]
           gi|568840759|ref|XP_006474333.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X6 [Citrus sinensis]
           gi|557556412|gb|ESR66426.1| hypothetical protein
           CICLE_v10010414mg [Citrus clementina]
          Length = 412

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 34/78 (43%), Positives = 52/78 (66%)
 Frame = +3

Query: 363 RERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAK 542
           R++ P    + V   KSEGLLPD+STL  L+L YA+NG   +A  +W+E+L+SSFV   +
Sbjct: 56  RKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQVVWEELLSSSFVLSVQ 115

Query: 543 VVSELIFIYGSMRDFDMV 596
           V+S+L+  YG +  F+ +
Sbjct: 116 VLSDLMDAYGRIGCFNEI 133


>gb|EOY32179.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 429

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = +3

Query: 414 EGLLPDDSTLSVLLLHYASNGLFDKAHGIWDEMLN-SSFVPDAKVVSELIFIYGSMRDFD 590
           +GL+P++STLS ++L YA NGLF +A  IW+EMLN +SF P  +VVS+ +  YG M  F 
Sbjct: 88  QGLIPNNSTLSEIMLWYADNGLFPQAQAIWEEMLNTTSFTPSIQVVSKFMDAYGKMGHFH 147

Query: 591 MV 596
            V
Sbjct: 148 KV 149


>gb|ABA18111.1| pentatricopeptide repeat protein [Arabidopsis arenosa]
          Length = 419

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = +3

Query: 363 RERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAK 542
           + RLP    +   + KS  LLP+  TL  L+L +A NG   +A  IWDE+LNSSFVPD  
Sbjct: 63  QRRLPDVAHEIFIQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEILNSSFVPDVF 122

Query: 543 VVSELIFIYGSMRDFDMV 596
           VVS+LI  Y  +  FD V
Sbjct: 123 VVSKLISAYEQLGFFDEV 140


>ref|XP_006381168.1| hypothetical protein POPTR_0006s07800g [Populus trichocarpa]
           gi|550335738|gb|ERP58965.1| hypothetical protein
           POPTR_0006s07800g [Populus trichocarpa]
          Length = 184

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +3

Query: 285 QGKCDDYVDRRDAC-NSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLH 461
           Q +CD  V  ++ C +  SLI  F  +R        +   E K E  LPD++TLS ++  
Sbjct: 4   QWECDKGVCGKETCVDCASLIQTFCKQR--------RAHLELKCEEFLPDNTTLSAMMRC 55

Query: 462 YASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 596
           YA +GL  ++  IW+EML SS VP  +VVSELI  Y     FD V
Sbjct: 56  YAYSGLLPQSQAIWEEMLYSSSVPSVQVVSELIDNYARSEIFDEV 100


>ref|XP_006372218.1| hypothetical protein POPTR_0018s14360g [Populus trichocarpa]
           gi|550318749|gb|ERP50015.1| hypothetical protein
           POPTR_0018s14360g [Populus trichocarpa]
          Length = 392

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +3

Query: 285 QGKCDDYVDRRDAC-NSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLH 461
           Q K D  V  ++ C +  SLI      + R P    + + E K EG LPD+ TLS ++L 
Sbjct: 46  QWKRDQGVFGKETCADCASLIQTLC--KHRRPHLAEELLLELKCEGFLPDNRTLSAMMLC 103

Query: 462 YASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYG 572
           YA +GL  +A  IW+EML SSFVP  +V S  I  +G
Sbjct: 104 YADSGLLPQAQAIWEEMLYSSFVPSVQVYSLAISCFG 140


>ref|XP_006573403.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Glycine max]
          Length = 415

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 35/113 (30%), Positives = 60/113 (53%)
 Frame = +3

Query: 258 LW*CLEQSLQGKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDS 437
           +W   E+ + G  D+ VD      + S        R+R+      ++++ K EG +P  +
Sbjct: 32  IWWQNEKGVIGGKDNSVDCSSLAQNSS--------RKRMIHQSDGSLHDIKVEGYMPKQT 83

Query: 438 TLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 596
           +L V +L+Y  NG F +A  +W++++NSSFVP  + +S L   Y   R FD+V
Sbjct: 84  SLCVSMLYYTENGFFPQAQTLWEQLVNSSFVPSVQFISRLFDAYAKHRKFDVV 136


>ref|XP_006418860.1| hypothetical protein EUTSA_v10003041mg [Eutrema salsugineum]
           gi|557096788|gb|ESQ37296.1| hypothetical protein
           EUTSA_v10003041mg [Eutrema salsugineum]
          Length = 424

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 408 KSEGLLPDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDF 587
           KS+ L+P+  TLS L+L +A NG   +A  IW+EMLNSSFVPD  V+S+LI  Y  +  F
Sbjct: 83  KSDNLVPNYITLSALMLCFAENGSVHRARSIWEEMLNSSFVPDLFVISKLISAYEQIGCF 142

Query: 588 DMV 596
             V
Sbjct: 143 SEV 145


>ref|NP_566863.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546757|sp|Q9M2A1.2|PP263_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g42630 gi|332644221|gb|AEE77742.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 415

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 35/78 (44%), Positives = 45/78 (57%)
 Frame = +3

Query: 363 RERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAK 542
           + RLP    +   + KS  LLP+  TL  L+L +A NG   +A  IWDE++NS FVPD  
Sbjct: 59  QRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEIINSCFVPDVF 118

Query: 543 VVSELIFIYGSMRDFDMV 596
           VVS+LI  Y     FD V
Sbjct: 119 VVSKLISAYEQFGCFDEV 136


>emb|CAB86446.1| putative protein [Arabidopsis thaliana]
          Length = 412

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 35/78 (44%), Positives = 45/78 (57%)
 Frame = +3

Query: 363 RERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAK 542
           + RLP    +   + KS  LLP+  TL  L+L +A NG   +A  IWDE++NS FVPD  
Sbjct: 56  QRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEIINSCFVPDVF 115

Query: 543 VVSELIFIYGSMRDFDMV 596
           VVS+LI  Y     FD V
Sbjct: 116 VVSKLISAYEQFGCFDEV 133


>gb|ESW04320.1| hypothetical protein PHAVU_011G085400g [Phaseolus vulgaris]
           gi|561005327|gb|ESW04321.1| hypothetical protein
           PHAVU_011G085400g [Phaseolus vulgaris]
          Length = 411

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
 Frame = +3

Query: 327 NSGSLIHGFSGERERLPLFPGKN--VYEKKSEGLLPDDSTLSVLLLHYASNGLFDKAHGI 500
           +S SL+   S +R    +FP  +   ++ K +G +P  ++L VL+L+Y  NGLF +A   
Sbjct: 45  DSSSLVQNNSRKR----MFPQSDGVFHDTKDDGYMPKQTSLCVLMLYYTENGLFPQAQTT 100

Query: 501 WDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 596
           W+++L SSFVP  + +S L   Y     FD V
Sbjct: 101 WEQLLYSSFVPSVEFISRLFDAYAKHGKFDEV 132


>ref|XP_006307633.1| hypothetical protein CARUB_v10009261mg [Capsella rubella]
           gi|482576344|gb|EOA40531.1| hypothetical protein
           CARUB_v10009261mg [Capsella rubella]
          Length = 419

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 33/78 (42%), Positives = 48/78 (61%)
 Frame = +3

Query: 363 RERLPLFPGKNVYEKKSEGLLPDDSTLSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAK 542
           ++RLP    +   + KS+ LLP+  TL  L+L +A NG   +A  IWDE+LNSSFV D  
Sbjct: 63  QKRLPKVAYEIFIQTKSDNLLPNYRTLCALMLCFAENGFVLRARTIWDEILNSSFVLDLV 122

Query: 543 VVSELIFIYGSMRDFDMV 596
           V+S+L+  Y  +  FD +
Sbjct: 123 VISKLMSAYEKIGCFDEI 140