BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00026112
         (553 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        214   1e-53
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         213   2e-53
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           213   2e-53
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   213   3e-53
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   212   4e-53
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   212   4e-53
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   212   5e-53
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...   212   5e-53
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     211   9e-53
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   209   5e-52
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               208   8e-52
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                208   8e-52
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   205   5e-51
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   205   5e-51
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     205   7e-51
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   205   7e-51
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     205   7e-51
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   204   1e-50
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   204   1e-50
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   203   2e-50

>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  214 bits (545), Expect = 1e-53
 Identities = 100/185 (54%), Positives = 128/185 (69%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGTAA-VADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ QG TI+G  A V+DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 403 IKSANLYHLQGTTILGNVATVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRGLLDGQ 460

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 461 SISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDD 520

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+ S  F+  C   GI
Sbjct: 521 YSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 580

Query: 539 VRHFT 553
           VRH+T
Sbjct: 581 VRHYT 585


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  213 bits (542), Expect = 2e-53
 Identities = 100/185 (54%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 235 IKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRGLLDGQ 292

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 293 SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDD 352

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+ S  F+  C   GI
Sbjct: 353 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 412

Query: 539 VRHFT 553
           VRH+T
Sbjct: 413 VRHYT 417


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  213 bits (542), Expect = 2e-53
 Identities = 100/185 (54%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 235 IKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRGLLDGQ 292

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 293 SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDD 352

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+ S  F+  C   GI
Sbjct: 353 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 412

Query: 539 VRHFT 553
           VRH+T
Sbjct: 413 VRHYT 417


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  213 bits (541), Expect = 3e-53
 Identities = 100/185 (54%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 369 IKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRGLLYGQ 426

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 427 SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDD 486

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+ S  F+  C   GI
Sbjct: 487 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 546

Query: 539 VRHFT 553
           VRH+T
Sbjct: 547 VRHYT 551


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  212 bits (540), Expect = 4e-53
 Identities = 100/185 (54%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2    IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
            I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 610  IKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMTEIGLAELSKRGLLDGQ 667

Query: 179  KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
             + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 668  SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDD 727

Query: 359  FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
            +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+ S  F+  C   GI
Sbjct: 728  YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 787

Query: 539  VRHFT 553
            VRH+T
Sbjct: 788  VRHYT 792


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  212 bits (540), Expect = 4e-53
 Identities = 100/185 (54%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 403 IKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMTEIGLAELSKRGLLDGQ 460

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 461 SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDD 520

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+ S  F+  C   GI
Sbjct: 521 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 580

Query: 539 VRHFT 553
           VRH+T
Sbjct: 581 VRHYT 585


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  212 bits (539), Expect = 5e-53
 Identities = 99/185 (53%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 364 IKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRGLLDGQ 421

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 422 SIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDD 481

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG ++ S  F+  C   GI
Sbjct: 482 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGI 541

Query: 539 VRHFT 553
           VRH+T
Sbjct: 542 VRHYT 546


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score =  212 bits (539), Expect = 5e-53
 Identities = 99/185 (53%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 418 IKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRGLLDGQ 475

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 476 SIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDD 535

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG ++ S  F+  C   GI
Sbjct: 536 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGI 595

Query: 539 VRHFT 553
           VRH+T
Sbjct: 596 VRHYT 600


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  211 bits (537), Expect = 9e-53
 Identities = 100/185 (54%), Positives = 128/185 (69%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 312 IKYANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRGLLDGQ 369

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 370 SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDD 429

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E  S  F+  C   GI
Sbjct: 430 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGI 489

Query: 539 VRHFT 553
           VRH+T
Sbjct: 490 VRHYT 494


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  209 bits (531), Expect = 5e-52
 Identities = 100/185 (54%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  +LY+ QG TI+G  AAV DS +  +     LWHMRLGH  E  L  L+K+GLL   
Sbjct: 345 IKNADLYHLQGTTIVGNVAAVTDSLSNSD-----LWHMRLGHMSEIGLAELSKRGLLDGQ 399

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T +DD
Sbjct: 400 NIGKLKFCEHCIFGKHKRVKFTTSTHTTEGILDYVHSDLWGPARKRSFGGARYMMTIVDD 459

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K E   +F +WKT +E QT RK+KVLRTDNG E+ S  F+  C   GI
Sbjct: 460 YSRKVWPYFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKSYCRSEGI 519

Query: 539 VRHFT 553
           VRH+T
Sbjct: 520 VRHYT 524


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  208 bits (529), Expect = 8e-52
 Identities = 97/185 (52%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGTAA-VADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ QG TI+G  A V+DS +   S+A  LWHMRLGH  E  L  L+ +GLL   
Sbjct: 220 IKSANLYHLQGTTILGNVATVSDSLSN--SDATNLWHMRLGHMSEIGLAELSMRGLLDGQ 277

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T ++D
Sbjct: 278 SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVND 337

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+ S  F+  C   GI
Sbjct: 338 YSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 397

Query: 539 VRHFT 553
           +RH+T
Sbjct: 398 MRHYT 402


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  208 bits (529), Expect = 8e-52
 Identities = 97/185 (52%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGTAA-VADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ QG TI+G  A V+DS +   S+A  LWHMRLGH  E  L  L+ +GLL   
Sbjct: 388 IKSANLYHLQGTTILGNVATVSDSLSN--SDATNLWHMRLGHMSEIGLAELSMRGLLDGQ 445

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++  S GG  Y +T ++D
Sbjct: 446 SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVND 505

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT RK+K+LRTDNG E+ S  F+  C   GI
Sbjct: 506 YSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 565

Query: 539 VRHFT 553
           +RH+T
Sbjct: 566 MRHYT 570


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  205 bits (522), Expect = 5e-51
 Identities = 96/182 (52%), Positives = 123/182 (67%)
 Frame = +2

Query: 8    RNNLYYYQGNTIIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVC 187
            ++ +Y   G++++GTAAV      +E    +LWH RLGH  EK L  L+KQGLL   +  
Sbjct: 722  QHGIYTLMGSSVLGTAAV------EEDNCTELWHRRLGHMSEKGLSILSKQGLLSGAETG 775

Query: 188  KLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSR 367
            KL FCE CV+GKQ+RVKF    H T G+L+Y+HSD+WGPS   S  G  Y+VTFIDDFSR
Sbjct: 776  KLKFCETCVMGKQRRVKFSMGSHTTNGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSR 835

Query: 368  RVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRH 547
            +VWVY +K KDEV G F +WKT +E +T + +K LRTDNG E+ +  F E C K GIVRH
Sbjct: 836  KVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRH 895

Query: 548  FT 553
             T
Sbjct: 896  RT 897


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  205 bits (522), Expect = 5e-51
 Identities = 95/180 (52%), Positives = 122/180 (67%)
 Frame = +2

Query: 14  NLYYYQGNTIIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKL 193
           NLY  +G+T+ G+   A + ++ E     LWHMRLGH  E  +  L K+ LL      K+
Sbjct: 400 NLYVLRGSTLHGSVTAA-AVSKDEPIKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGKM 458

Query: 194 DFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRV 373
            FCEHCV GK KRVKF T++H T+GILDYVH+D+WGPS+   LGG  Y +T IDD+SR+V
Sbjct: 459 KFCEHCVFGKHKRVKFNTSVHRTKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDYSRKV 518

Query: 374 WVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFT 553
           W Y +K KD+    F +WK RIE QT +++KVLRTDNGGE+ SD F + C K GIVRH T
Sbjct: 519 WPYFLKHKDDTFAAFKEWKVRIERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHT 578


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  205 bits (521), Expect = 7e-51
 Identities = 97/185 (52%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+ LL   
Sbjct: 438 IKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRELLDGQ 495

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP+   S GG  Y +T +DD
Sbjct: 496 SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDD 555

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT +K+K+LRTDNG E+ S  F+  C   GI
Sbjct: 556 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGI 615

Query: 539 VRHFT 553
           V H+T
Sbjct: 616 VHHYT 620


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  205 bits (521), Expect = 7e-51
 Identities = 97/185 (52%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV+DS +   S+A  LWHMRLGH  E  L  L+K+ LL   
Sbjct: 438 IKSANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRELLDGQ 495

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP+   S GG  Y +T +DD
Sbjct: 496 SIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDD 555

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +   +F +WKT +E QT +K+K+LRTDNG E+ S  F+  C   GI
Sbjct: 556 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGI 615

Query: 539 VRHFT 553
           V H+T
Sbjct: 616 VHHYT 620


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  205 bits (521), Expect = 7e-51
 Identities = 99/185 (53%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   IRRNNLYYYQGNTIIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDV 178
           I+  NLY+ +G TI+G  AAV DS +   S+A  LWHMRLGH  E  L  L+K+GLL   
Sbjct: 375 IKSANLYHLRGTTILGNVAAVFDSLSN--SDATNLWHMRLGHMSEIGLAELSKRGLLDGQ 432

Query: 179 KVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDD 358
            + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP+   S GG  Y +T +DD
Sbjct: 433 SIRKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPAHKTSFGGARYMMTIVDD 492

Query: 359 FSRRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGI 538
           +SR+VW Y +K K +    F +WKT +E QT RK+K+LRTDNG E+ S  F+  C   GI
Sbjct: 493 YSRKVWPYFLKHKYQAFDGFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGI 552

Query: 539 VRHFT 553
           V H+T
Sbjct: 553 VCHYT 557


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  204 bits (518), Expect = 1e-50
 Identities = 92/179 (51%), Positives = 117/179 (65%)
 Frame = +2

Query: 17  LYYYQGNTIIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLD 196
           LY  +G T+ G+ + A +    E     LWHMRLGH     +  L K+ LLK     K+ 
Sbjct: 399 LYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIK 458

Query: 197 FCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVW 376
           FCEHC+ GK KRV+F T++H T+G LDYVH+D+WGPSK PSLGG  Y +T IDD+SR+VW
Sbjct: 459 FCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVW 518

Query: 377 VYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFT 553
            Y +K KD+    F  WK  IE QT RK+K+LRTDNGGE+ S  F + C + GIVRH T
Sbjct: 519 PYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score =  204 bits (518), Expect = 1e-50
 Identities = 92/179 (51%), Positives = 117/179 (65%)
 Frame = +2

Query: 17  LYYYQGNTIIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLD 196
           LY  +G T+ G+ + A +    E     LWHMRLGH     +  L K+ LLK     K+ 
Sbjct: 399 LYVLRGCTLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIK 458

Query: 197 FCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVW 376
           FCEHC+ GK KRV+F T++H T+G LDYVH+D+WGPSK PSLGG  Y +T IDD+SR+VW
Sbjct: 459 FCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVW 518

Query: 377 VYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFT 553
            Y +K KD+    F  WK  IE QT RK+K+LRTDNGGE+ S  F + C + GIVRH T
Sbjct: 519 PYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  203 bits (517), Expect = 2e-50
 Identities = 92/179 (51%), Positives = 117/179 (65%)
 Frame = +2

Query: 17  LYYYQGNTIIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLD 196
           LY  +G T+ G+ + A +    E     LWHMRLGH     +  L K+ LLK     K+ 
Sbjct: 399 LYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIK 458

Query: 197 FCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVW 376
           FCEHC+ GK KRV+F T++H T+G LDYVH+D+WGPSK PSLGG  Y +T IDD+SR+VW
Sbjct: 459 FCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTVIDDYSRKVW 518

Query: 377 VYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFT 553
            Y +K KD+    F  WK  IE QT RK+K+LRTDNGGE+ S  F + C + GIVRH T
Sbjct: 519 PYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577