BLASTX nr result
ID: Rehmannia26_contig00026068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00026068
(1132 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ18298.1| hypothetical protein PRUPE_ppa022877mg, partial [... 300 7e-79
ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citr... 299 2e-78
ref|XP_002512787.1| pentatricopeptide repeat-containing protein,... 298 4e-78
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi... 290 7e-76
gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis] 288 3e-75
gb|EPS63217.1| hypothetical protein M569_11569 [Genlisea aurea] 283 1e-73
ref|XP_003624556.1| Pentatricopeptide repeat-containing protein ... 280 1e-72
ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containi... 271 4e-70
ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containi... 270 6e-70
gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus... 270 8e-70
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226... 265 3e-68
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212... 265 3e-68
ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Caps... 261 5e-67
ref|NP_189297.1| pentatricopeptide repeat-containing protein [Ar... 259 1e-66
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ... 257 7e-66
ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutr... 253 1e-64
ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [A... 251 4e-64
gb|EOY25899.1| Pentatricopeptide repeat superfamily protein [The... 213 1e-52
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 212 3e-52
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat... 212 3e-52
>gb|EMJ18298.1| hypothetical protein PRUPE_ppa022877mg, partial [Prunus persica]
Length = 347
Score = 300 bits (768), Expect = 7e-79
Identities = 141/226 (62%), Positives = 177/226 (78%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KMRV+ VVSWTT+I+GLV + A+ +F++MP +NV SW+AM+NGY +++ PE+AFEL
Sbjct: 111 KMRVRNVVSWTTMISGLVACGELHAARAVFERMPAKNVVSWTAMMNGYVRNQQPEEAFEL 170
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ +PNE+TLVSL AC LGSLKLGRW+H F +KNGF++ VFLGTALID YSK
Sbjct: 171 FWRMQVGDVRPNEFTLVSLLKACTLLGSLKLGRWIHDFALKNGFKLDVFLGTALIDTYSK 230
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGSLE A+RVF++M IKS+ATWNAMITSLGVHG EEALA F +ME++N++PDAIT G+
Sbjct: 231 CGSLEDARRVFDEMRIKSLATWNAMITSLGVHGFGEEALALFAEMEKVNVRPDAITFVGV 290
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
LSACL T N+E G YF YM +HYGI P EHY C+ +YSRA L
Sbjct: 291 LSACLHTNNLEAGCMYFKYMSKHYGITPILEHYTCMIELYSRADML 336
Score = 96.3 bits (238), Expect = 2e-17
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 31/239 (12%)
Frame = +3
Query: 69 MDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFTA 248
MD A +F ++ ++W+ MI Y + ++A L++ M P+++T + A
Sbjct: 1 MDYANLIFHQIQGPLTFTWNLMIMSYTINGCSQEALLLYSLMIHQGFPPDKFTFPFVIKA 60
Query: 249 CAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVATW 428
C + + G+ VH +IKN F +F+ L+D Y KCG ++ RVFEKM +++V +W
Sbjct: 61 CIASSAFEQGKVVHGLSIKNSFSRDMFVQNTLMDFYFKCGEIDCGCRVFEKMRVRNVVSW 120
Query: 429 NAMITSLGVHGRYEEALAYFEDMERMN-------------------------------IK 515
MI+ L G A A FE M N ++
Sbjct: 121 TTMISGLVACGELHAARAVFERMPAKNVVSWTAMMNGYVRNQQPEEAFELFWRMQVGDVR 180
Query: 516 PDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKLLDPK 692
P+ TL +L AC G+++ GR + +++ G K L YS+ L D +
Sbjct: 181 PNEFTLVSLLKACTLLGSLKLGRWIHDFALKN-GFKLDVFLGTALIDTYSKCGSLEDAR 238
>ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citrus clementina]
gi|557549465|gb|ESR60094.1| hypothetical protein
CICLE_v10018065mg [Citrus clementina]
Length = 438
Score = 299 bits (765), Expect = 2e-78
Identities = 141/233 (60%), Positives = 179/233 (76%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KMRV++VVSWTT+I+GL + +D A+R+F++M RNV SW+AMIN Y ++E +AFEL
Sbjct: 188 KMRVRSVVSWTTMISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAHEAFEL 247
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M + +PNE+TLVSL AC ELGSLKLG W+H F +KNGF +GV+LGTALIDMYSK
Sbjct: 248 FQRMLLDNVRPNEFTLVSLLQACTELGSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSK 307
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGSLE A++VF+KMEIK++ATWN+MITSLGVHG EEALA F ME N++PDAIT G+
Sbjct: 308 CGSLEDARKVFDKMEIKNLATWNSMITSLGVHGHGEEALALFAQMENANVQPDAITFVGV 367
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKLLDPKSSD 701
L AC+ T N+ +G +YF YM EHYGI P EHY CL +Y+R AK+ D S +
Sbjct: 368 LCACVHTNNVNEGYRYFRYMREHYGISPIEEHYTCLIELYNR-AKMKDEVSEE 419
Score = 100 bits (248), Expect = 1e-18
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
+ D A +F ++ +V++W+ MI + + +A L+ M N +P+++T +F
Sbjct: 77 KTDHALLVFSQIQCPHVFTWNLMIRALTINGSSRQALLLYNLMICNGFRPDKFTFPFVFK 136
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVAT 425
AC +++ G+ VH +K GF +F+ L+D+Y KCG + ++VF+KM ++SV +
Sbjct: 137 ACITSLAIEKGKEVHGLAVKAGFSRDMFVQNTLMDLYFKCGDVNGGRKVFDKMRVRSVVS 196
Query: 426 WNAMITSLGVHGRYEEALAYFEDM----------------------------ERM---NI 512
W MI+ L G + A FE M +RM N+
Sbjct: 197 WTTMISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAHEAFELFQRMLLDNV 256
Query: 513 KPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYV----CLFVMYSRAAKL 680
+P+ TL +L AC + G+++ G I + +K F V L MYS+ L
Sbjct: 257 RPNEFTLVSLLQACTELGSLKLGN-----WIHDFALKNGFVLGVYLGTALIDMYSKCGSL 311
Query: 681 LDPK 692
D +
Sbjct: 312 EDAR 315
Score = 63.5 bits (153), Expect = 1e-07
Identities = 37/117 (31%), Positives = 58/117 (49%)
Frame = +3
Query: 237 LFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKS 416
L C G LKL +H I++G L L+D+ S G ++A VF +++
Sbjct: 36 LLRKCRNFGQLKL---IHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPH 92
Query: 417 VATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGILSACLQTGNIEKGRK 587
V TWN MI +L ++G +AL + M +PD T + AC+ + IEKG++
Sbjct: 93 VFTWNLMIRALTINGSSRQALLLYNLMICNGFRPDKFTFPFVFKACITSLAIEKGKE 149
>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 480
Score = 298 bits (762), Expect = 4e-78
Identities = 138/226 (61%), Positives = 176/226 (77%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KM V++VVSWTT +AGLV +D A+ FD+MPMRNV SW+AMINGY K++ P++AFEL
Sbjct: 190 KMAVRSVVSWTTFVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFEL 249
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ +PN +TLV L AC ELGSL+LGR +H++ ++NGF++GVFLGTALIDMYSK
Sbjct: 250 FQRMQLANVRPNGFTLVGLLRACTELGSLELGRRIHEYALENGFKVGVFLGTALIDMYSK 309
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGS+E AK+VFE+M+ KS+ATWN+MITSLGVHG +EALA F ME N++PDAIT G+
Sbjct: 310 CGSIEDAKKVFEEMQKKSLATWNSMITSLGVHGFGKEALALFAQMEEANVRPDAITFVGV 369
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
L AC+ T N+E G +YF YM EHYGI P EHY C+ +Y+RAA L
Sbjct: 370 LFACVNTNNVEAGYRYFKYMTEHYGITPMLEHYTCMIELYTRAAML 415
Score = 125 bits (314), Expect = 3e-26
Identities = 71/241 (29%), Positives = 118/241 (48%), Gaps = 31/241 (12%)
Frame = +3
Query: 63 ERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLF 242
+++D A +FD++ + ++W+ MI Y + N ++A L+ M P+++T +
Sbjct: 78 QKVDYATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVI 137
Query: 243 TACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVA 422
AC + +L G+ VH F IK GF FL L+D+Y KCG L+YA+++F+KM ++SV
Sbjct: 138 KACLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVV 197
Query: 423 TWNAMITSLGVHG-------------------------------RYEEALAYFEDMERMN 509
+W + L G R +EA F+ M+ N
Sbjct: 198 SWTTFVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLAN 257
Query: 510 IKPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKLLDP 689
++P+ TL G+L AC + G++E GR+ Y +E+ G K L MYS+ + D
Sbjct: 258 VRPNGFTLVGLLRACTELGSLELGRRIHEYALEN-GFKVGVFLGTALIDMYSKCGSIEDA 316
Query: 690 K 692
K
Sbjct: 317 K 317
>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568829286|ref|XP_006468954.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568829288|ref|XP_006468955.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 435
Score = 290 bits (742), Expect = 7e-76
Identities = 138/231 (59%), Positives = 174/231 (75%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KMRV++VVSWTT+I+GL + +D A+R+F++M RNV SW+AMIN Y ++E ++AFEL
Sbjct: 188 KMRVRSVVSWTTMISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAQEAFEL 247
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M + +PNE+TLVSL AC EL SLKLG W+H F +KNGF +GV+LGTALIDMYSK
Sbjct: 248 FQRMLLDNVRPNEFTLVSLLQACTELRSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSK 307
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGSLE A++VF+KMEIK++ATWN+MITSLGVHG EEALA F ME N+ PDAIT G+
Sbjct: 308 CGSLEDARKVFDKMEIKNLATWNSMITSLGVHGHGEEALALFAQMENANVHPDAITFVGV 367
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKLLDPKS 695
L AC+ N+ +G YF YM EHYGI P EHY CL +Y+ AK+ D S
Sbjct: 368 LCACVHENNVNEGYSYFRYMREHYGISPIEEHYTCLIELYN-CAKMKDEVS 417
Score = 95.5 bits (236), Expect = 3e-17
Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 35/244 (14%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
+ D A +F ++ +V++W+ MI + + ++A L+ M N +P+++T +
Sbjct: 77 KTDHALLVFSQIQCPHVFTWNLMIRALTINGSSQQALLLYNLMICNGFRPDKFTFPFVIK 136
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVAT 425
AC +++ G+ VH +K GF +F+ L+D+Y KCG ++ + VF+KM ++SV +
Sbjct: 137 ACVASLAIEKGKEVHGLAVKAGFSRDMFVQNTLMDLYFKCGDVDGGRMVFDKMRVRSVVS 196
Query: 426 WNAMITSLGVHG-------------------------------RYEEALAYFEDMERMNI 512
W MI+ L G R +EA F+ M N+
Sbjct: 197 WTTMISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAQEAFELFQRMLLDNV 256
Query: 513 KPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYV----CLFVMYSRAAKL 680
+P+ TL +L AC + +++ G I + +K F V L MYS+ L
Sbjct: 257 RPNEFTLVSLLQACTELRSLKLGN-----WIHDFALKNGFVLGVYLGTALIDMYSKCGSL 311
Query: 681 LDPK 692
D +
Sbjct: 312 EDAR 315
Score = 64.7 bits (156), Expect = 7e-08
Identities = 37/117 (31%), Positives = 60/117 (51%)
Frame = +3
Query: 237 LFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKS 416
L C G LKL +H I++G L L+D+ S G ++A VF +++
Sbjct: 36 LLRKCRNFGQLKL---IHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPH 92
Query: 417 VATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGILSACLQTGNIEKGRK 587
V TWN MI +L ++G ++AL + M +PD T ++ AC+ + IEKG++
Sbjct: 93 VFTWNLMIRALTINGSSQQALLLYNLMICNGFRPDKFTFPFVIKACVASLAIEKGKE 149
>gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis]
Length = 428
Score = 288 bits (737), Expect = 3e-75
Identities = 136/226 (60%), Positives = 171/226 (75%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KMRV+ +VSWTT++ GLV + + A+ +F++MP +NV SW+ MI+GY + PE+AF+L
Sbjct: 181 KMRVRNLVSWTTMVTGLVGSGDLRAARAIFEQMPAKNVVSWTIMIDGYVEDRQPEEAFKL 240
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ + PNE+TLVSL AC ELGSLKLGRWVH F +KNGFE+ VF GTALID YSK
Sbjct: 241 FRRMQLDNVSPNEFTLVSLLKACTELGSLKLGRWVHDFALKNGFELDVFFGTALIDTYSK 300
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGSLE A+RVF+KM+ KS+ATWN+MITSLGVHG EEALA F +MER N++PD IT GI
Sbjct: 301 CGSLEDARRVFDKMQAKSIATWNSMITSLGVHGFGEEALALFAEMERQNVRPDEITFVGI 360
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
LSACLQ ++ RKYF YM + Y I P EHY+C+ +YSRA L
Sbjct: 361 LSACLQKNSVSDCRKYFEYMNKRYRILPIKEHYICMIELYSRAGML 406
Score = 96.7 bits (239), Expect = 2e-17
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 36/244 (14%)
Frame = +3
Query: 69 MDVAQRMF-DKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
MD A +F ++P ++W+ MI Y + +P +A LF M P+++T +
Sbjct: 70 MDYAALVFRHQIPYPLTFTWNLMIRAYTLNASPRQALLLFTLMTSRGFPPDKFTFPFVIK 129
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVAT 425
AC + + G VH IK F +F+ L+D Y KCG ++VF+KM ++++ +
Sbjct: 130 ACTASSAFRPGDAVHGLAIKARFSGDIFVQNTLMDFYFKCGDAHSGRKVFDKMRVRNLVS 189
Query: 426 WNAMITSLGVHG-------------------------------RYEEALAYFEDMERMNI 512
W M+T L G + EEA F M+ N+
Sbjct: 190 WTTMVTGLVGSGDLRAARAIFEQMPAKNVVSWTIMIDGYVEDRQPEEAFKLFRRMQLDNV 249
Query: 513 KPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYV----CLFVMYSRAAKL 680
P+ TL +L AC + G+++ GR + + +K FE V L YS+ L
Sbjct: 250 SPNEFTLVSLLKACTELGSLKLGR-----WVHDFALKNGFELDVFFGTALIDTYSKCGSL 304
Query: 681 LDPK 692
D +
Sbjct: 305 EDAR 308
>gb|EPS63217.1| hypothetical protein M569_11569 [Genlisea aurea]
Length = 417
Score = 283 bits (723), Expect = 1e-73
Identities = 142/214 (66%), Positives = 170/214 (79%), Gaps = 2/214 (0%)
Frame = +3
Query: 15 KTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEM 194
KT VSWTT IAGL+ R+D A+++FD+MP RNV S++AMINGYA+SE PE+AFELFA M
Sbjct: 196 KTAVSWTTAIAGLLRRGRVDHARKLFDEMPRRNVVSFTAMINGYARSEKPERAFELFARM 255
Query: 195 RRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSL 374
+R PNEYTLV L +C+ LG L+LG VH++ NGFEIG FLGTALIDMYSKCGS
Sbjct: 256 QREDVTPNEYTLVGLAMSCSRLGILELGHRVHEYATGNGFEIGPFLGTALIDMYSKCGSP 315
Query: 375 EYAKRVFEKMEIK-SVATWNAMITSLGVHGRYEEALAYFEDMER-MNIKPDAITLTGILS 548
++AKRVFE ME + S ATWNAMITSLG+HG EEAL+ FE+MER NI+PDA TLTG+L+
Sbjct: 316 DHAKRVFEGMEERSSAATWNAMITSLGIHGNGEEALSLFEEMERTTNIEPDAFTLTGVLA 375
Query: 549 ACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCL 650
ACLQT N+EKG KYFY+MI YGI+P EHY L
Sbjct: 376 ACLQTNNVEKGIKYFYHMINRYGIEPVPEHYTYL 409
Score = 76.3 bits (186), Expect = 2e-11
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 33/211 (15%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
++D A + +++ +SW+ +I + ++ P KA L+ M R +++T
Sbjct: 79 KLDYAYLVLERIEDPTSFSWNLLIRAHTENGRPVKAVLLYNLMIRRGVDADKFTFPFAMK 138
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKM--EIKSV 419
AC G ++ R ++ F +K G V+L L+ +Y K G+L+ A +VF+KM K+
Sbjct: 139 ACLASGFVEKARELYGFAVKRGMWRDVYLNNLLMAVYFKYGALDDALKVFDKMPRHNKTA 198
Query: 420 ATWNAMITSLGVHGRYEEALAYFEDMERMN------------------------------ 509
+W I L GR + A F++M R N
Sbjct: 199 VSWTTAIAGLLRRGRVDHARKLFDEMPRRNVVSFTAMINGYARSEKPERAFELFARMQRE 258
Query: 510 -IKPDAITLTGILSACLQTGNIEKGRKYFYY 599
+ P+ TL G+ +C + G +E G + Y
Sbjct: 259 DVTPNEYTLVGLAMSCSRLGILELGHRVHEY 289
>ref|XP_003624556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499571|gb|AES80774.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 476
Score = 280 bits (715), Expect = 1e-72
Identities = 129/226 (57%), Positives = 172/226 (76%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KMRV+ VVSWTT+IAGLV ++D A+ +F+++P +NV SW+AMINGY K++NP KAF+L
Sbjct: 179 KMRVRNVVSWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDL 238
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M + +PNE+TLVSL AC +LGSLKLGR +H F +KNGFE+G FLGTAL+DMYSK
Sbjct: 239 FERMLIDNVRPNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSK 298
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGSL+ A +VF ME++++ATWN M+TS GVHG E L F++ME+ + PDAIT G+
Sbjct: 299 CGSLDAAVKVFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGV 358
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
LSAC+Q ++E G+KYF M EHY + P EHY C+ +Y+RA +L
Sbjct: 359 LSACVQINDLELGQKYFSLMTEHYSLTPILEHYTCMVGLYTRANEL 404
Score = 94.4 bits (233), Expect = 8e-17
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 36/241 (14%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
++D A +FD++ ++++W+ MI Y S P+K+ LF +M P+++T +
Sbjct: 67 KIDYASLVFDQLNDPDIFTWNVMIRAYNTSGLPQKSIFLFKDMICCGFLPDKFTYPFVIN 126
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK--------------------- 362
AC G + GR H IK GF V++ ++++Y K
Sbjct: 127 ACIASGVIDFGRLTHGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVV 186
Query: 363 -----------CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMN 509
CG L+ A+ VFE++ K+V +W AMI + +A FE M N
Sbjct: 187 SWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDN 246
Query: 510 IKPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFE----HYVCLFVMYSRAAK 677
++P+ TL ++ AC G+++ GR+ + + +K FE L MYS+
Sbjct: 247 VRPNEFTLVSLIKACTDLGSLKLGRR-----MHDFALKNGFELGPFLGTALVDMYSKCGS 301
Query: 678 L 680
L
Sbjct: 302 L 302
>ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like [Glycine max]
Length = 474
Score = 271 bits (693), Expect = 4e-70
Identities = 126/226 (55%), Positives = 171/226 (75%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KM V+ V +WTT+IAG V ++D A+ +F++MP +NV SW+A+I+GY K + P +AF+L
Sbjct: 182 KMCVRNVFAWTTVIAGFVACGKLDTARELFEQMPSKNVVSWTAIIDGYVKHKQPIEAFDL 241
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ + +PNEYTLVSL AC E+GSLKLGR VH F +KNGFE+ FLGTALIDMYSK
Sbjct: 242 FERMQADNVRPNEYTLVSLVRACTEMGSLKLGRRVHDFALKNGFELEPFLGTALIDMYSK 301
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CG+L+ A+ VF+ M+++++ATWN MITSLGVHG +EAL+ FE+ME+ N PDAIT G+
Sbjct: 302 CGNLDDARTVFDMMQMRTLATWNTMITSLGVHGYRDEALSIFEEMEKANEVPDAITFVGV 361
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
LSAC+ ++E +KYF M +HYGI P EHY C+ +++RA KL
Sbjct: 362 LSACVYMNDLELAQKYFNLMTDHYGITPILEHYTCMVEIHTRAIKL 407
Score = 103 bits (257), Expect = 1e-19
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
+M A +FD++ +V++W+ MI Y +P+ AF LF M P+++T +
Sbjct: 71 KMKYATLVFDQLNAPDVFTWNVMIRAYTIGGSPKMAFLLFKAMLYQGFAPDKFTYPCVIN 130
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK--------------------- 362
AC +L +GR H IK GF +++ ++++Y K
Sbjct: 131 ACMAYNALDVGRVAHALAIKMGFWGDLYVQNTMMNLYFKCENVDDGWNVFDKMCVRNVFA 190
Query: 363 ----------CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNI 512
CG L+ A+ +FE+M K+V +W A+I H + EA FE M+ N+
Sbjct: 191 WTTVIAGFVACGKLDTARELFEQMPSKNVVSWTAIIDGYVKHKQPIEAFDLFERMQADNV 250
Query: 513 KPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHY----VCLFVMYSRAAKL 680
+P+ TL ++ AC + G+++ GR+ + + +K FE L MYS+ L
Sbjct: 251 RPNEYTLVSLVRACTEMGSLKLGRR-----VHDFALKNGFELEPFLGTALIDMYSKCGNL 305
Query: 681 LDPKS 695
D ++
Sbjct: 306 DDART 310
>ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Glycine max]
gi|571525647|ref|XP_006598987.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Glycine max]
Length = 483
Score = 270 bits (691), Expect = 6e-70
Identities = 127/227 (55%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KMRV+ V +WTT+I+GLV ++D A+ +F++MP +NV SW+AMI+GY K + P +AF L
Sbjct: 183 KMRVRNVFAWTTVISGLVACGKLDTARELFEQMPSKNVVSWTAMIDGYVKHKQPIEAFNL 242
Query: 183 FAEMRR-NRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYS 359
F M++ + +PNEYTLVSL AC E+GSLKLGR VH F +KNGFE+ FLGTALIDMYS
Sbjct: 243 FERMQQVDNVRPNEYTLVSLVRACTEMGSLKLGRRVHDFALKNGFELEPFLGTALIDMYS 302
Query: 360 KCGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTG 539
KCG L+ A+ VF+ M+++++ATWN MITSLGVHG +EAL+ F++ME+ N PDAIT G
Sbjct: 303 KCGYLDDARTVFDMMQVRTLATWNTMITSLGVHGYRDEALSLFDEMEKANEVPDAITFVG 362
Query: 540 ILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
+LSAC+ ++E +KYF M +HYGI P EHY C+ +Y+RA +L
Sbjct: 363 VLSACVYMNDLELAQKYFNLMTDHYGITPILEHYTCMVEIYTRAIEL 409
Score = 96.3 bits (238), Expect = 2e-17
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 36/246 (14%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
+M A +FD++ +V++W+ MI + +P+ A LF M P+++T +
Sbjct: 72 KMKYATLVFDQLNAPDVFTWNVMIRAFTIGGSPKMALLLFKAMLCQGFAPDKFTYPFVIN 131
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVAT 425
AC +L LG H IK GF +++ ++++Y KC +++ ++VF+KM +++V
Sbjct: 132 ACMASSALDLGIVAHALAIKMGFWGDLYVQNTMMNLYFKCENVDDGRKVFDKMRVRNVFA 191
Query: 426 WNAMITSLGVHGRYEEALAYFEDM----------------------------ERM----N 509
W +I+ L G+ + A FE M ERM N
Sbjct: 192 WTTVISGLVACGKLDTARELFEQMPSKNVVSWTAMIDGYVKHKQPIEAFNLFERMQQVDN 251
Query: 510 IKPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHY----VCLFVMYSRAAK 677
++P+ TL ++ AC + G+++ GR+ + + +K FE L MYS+
Sbjct: 252 VRPNEYTLVSLVRACTEMGSLKLGRR-----VHDFALKNGFELEPFLGTALIDMYSKCGY 306
Query: 678 LLDPKS 695
L D ++
Sbjct: 307 LDDART 312
>gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus vulgaris]
Length = 482
Score = 270 bits (690), Expect = 8e-70
Identities = 124/226 (54%), Positives = 169/226 (74%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KMRV+ V +WT++IAG V +D A+++F+KMP +NV SW+AMI+GY K E P +AF L
Sbjct: 182 KMRVRNVFAWTSVIAGFVACGSLDTARKLFEKMPSKNVVSWTAMIDGYVKHERPIEAFNL 241
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M + +PNEYT+VSL AC E+GSLKLGR +H F +KN F++G FLGTALIDMYSK
Sbjct: 242 FERMLVDDVRPNEYTVVSLVRACTEMGSLKLGRRIHDFVLKNNFDLGPFLGTALIDMYSK 301
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGSL+ A++VF+ M+++++ATWN MITSLGVHG +EA++ FE+M + N PDAIT G+
Sbjct: 302 CGSLDEARKVFDLMQVRTLATWNTMITSLGVHGFRDEAISLFEEMVKANEVPDAITFVGV 361
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
LSAC+ + + +KYF M +HYGI P EHY C+ +Y+RA +L
Sbjct: 362 LSACIYVNDTQLAQKYFNLMTDHYGITPILEHYTCMVEIYTRAVEL 407
Score = 90.9 bits (224), Expect = 9e-16
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
+++ A +FD++ + ++W+ MI +P+ A LF M P+++T + +
Sbjct: 71 KLNYATLVFDQLNAPDTFTWNVMIRANTIGGSPKMALLLFKAMLSQGFAPDKFTYPFVIS 130
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEI----- 410
AC +L LGR H IK GF +++ T ++++Y KC ++ +VF+KM +
Sbjct: 131 ACVASNALDLGRLTHALAIKMGFWSDLYVQTNVMNLYFKCHEVDDGWKVFDKMRVRNVFA 190
Query: 411 --------------------------KSVATWNAMITSLGVHGRYEEALAYFEDMERMNI 512
K+V +W AMI H R EA FE M ++
Sbjct: 191 WTSVIAGFVACGSLDTARKLFEKMPSKNVVSWTAMIDGYVKHERPIEAFNLFERMLVDDV 250
Query: 513 KPDAITLTGILSACLQTGNIEKGRKYFYYMIE-HYGIKPSFEHYVCLFVMYSRAAKL 680
+P+ T+ ++ AC + G+++ GR+ ++++ ++ + P L MYS+ L
Sbjct: 251 RPNEYTVVSLVRACTEMGSLKLGRRIHDFVLKNNFDLGPFLG--TALIDMYSKCGSL 305
>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 265 bits (677), Expect = 3e-68
Identities = 127/226 (56%), Positives = 166/226 (73%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KMRV+ VVSWTT+I+GL+ + A+R+FD++P +NV SW+AMINGY +++ PE+A EL
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ PNEYT+VSL AC E+G L LGR +H + IKN EIGV+LGTALIDMYSK
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSK 304
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGS++ A VFE M KS+ TWN+MITSLGVHG +EAL F +MER+N+KPDAIT G+
Sbjct: 305 CGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGV 364
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
L AC+ N+++G YF M +HYGI P EHY C+ +Y+R+ L
Sbjct: 365 LCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNL 410
Score = 158 bits (399), Expect = 4e-36
Identities = 81/203 (39%), Positives = 124/203 (61%), Gaps = 1/203 (0%)
Frame = +3
Query: 75 VAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRN-RAKPNEYTLVSLFTAC 251
V++++FD M ++ SW++MI YA+S +A E+F M R+ + N TL ++ AC
Sbjct: 1304 VSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLAC 1363
Query: 252 AELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVATWN 431
A G+L+ G+ +H IK E V +GT++IDMY KCG +E AK+ F++M+ K+V +W
Sbjct: 1364 AHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWT 1423
Query: 432 AMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGILSACLQTGNIEKGRKYFYYMIEH 611
AM+ G+HGR +EAL F M R +KP+ IT +L+AC G +E+G +F M
Sbjct: 1424 AMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHK 1483
Query: 612 YGIKPSFEHYVCLFVMYSRAAKL 680
Y I+P EHY C+ ++ RA L
Sbjct: 1484 YDIEPGIEHYGCMVDLFGRAGCL 1506
Score = 117 bits (294), Expect = 7e-24
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 9/200 (4%)
Frame = +3
Query: 78 AQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRR--------NRAKPNEYTLV 233
A+ +FD++P+RNV SW++MI GY ++E + A LF + N + +V
Sbjct: 1196 ARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMV 1255
Query: 234 SLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIK 413
S+ +AC+ + + VH F +K GF+ + +G L+D Y+KCG +K+VF+ ME K
Sbjct: 1256 SVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK 1315
Query: 414 SVATWNAMITSLGVHGRYEEALAYFEDMER-MNIKPDAITLTGILSACLQTGNIEKGRKY 590
+WN+MI G EAL F M R + ++ +A+TL+ +L AC G + G+
Sbjct: 1316 DDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGK-- 1373
Query: 591 FYYMIEHYGIKPSFEHYVCL 650
I IK E+ VC+
Sbjct: 1374 ---CIHDQVIKMDLEYNVCV 1390
Score = 94.0 bits (232), Expect = 1e-16
Identities = 49/156 (31%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Frame = +3
Query: 111 NVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVH 290
NV+SW+++I A+ + +A F+ +R+ P + +C+ L L GR H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 291 QFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYE 470
Q GFE +F+ +ALIDMYSKCG L+ A+ +F+++ +++V +W +MIT + + +
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225
Query: 471 EALAYFEDM--------ERMNIKPDAITLTGILSAC 554
AL F+D + N+ D++ + +LSAC
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSAC 1261
Score = 87.8 bits (216), Expect = 7e-15
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 35/242 (14%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
R+ A +F ++ ++W+ +I + E+A L+ M +++T +
Sbjct: 74 RIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIK 133
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEI----- 410
AC S+ LG+ VH IK GF VF+ LID Y KCG +A +VFEKM +
Sbjct: 134 ACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS 193
Query: 411 --------------------------KSVATWNAMITSLGVHGRYEEALAYFEDMERMNI 512
K+V +W AMI + + EEAL F+ M+ NI
Sbjct: 194 WTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
Query: 513 KPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYV----CLFVMYSRAAKL 680
P+ T+ ++ AC + G + GR I Y IK E V L MYS+ +
Sbjct: 254 FPNEYTMVSLIKACTEMGILTLGRG-----IHDYAIKNCIEIGVYLGTALIDMYSKCGSI 308
Query: 681 LD 686
D
Sbjct: 309 KD 310
Score = 79.0 bits (193), Expect = 3e-12
Identities = 39/133 (29%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
R+++A++ FD+M +NV SW+AM+ GY ++A ++F +M R KPN T VS+
Sbjct: 1403 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 1462
Query: 246 ACAELGSLKLG-RWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIK-SV 419
AC+ G ++ G W + K E G+ ++D++ + G L A + ++M++K
Sbjct: 1463 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF 1522
Query: 420 ATWNAMITSLGVH 458
W +++ + +H
Sbjct: 1523 VVWGSLLGACRIH 1535
>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 265 bits (677), Expect = 3e-68
Identities = 127/226 (56%), Positives = 166/226 (73%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KMRV+ VVSWTT+I+GL+ + A+R+FD++P +NV SW+AMINGY +++ PE+A EL
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ PNEYT+VSL AC E+G L LGR +H + IKN EIGV+LGTALIDMYSK
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSK 304
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGS++ A VFE M KS+ TWN+MITSLGVHG +EAL F +MER+N+KPDAIT G+
Sbjct: 305 CGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGV 364
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
L AC+ N+++G YF M +HYGI P EHY C+ +Y+R+ L
Sbjct: 365 LCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNL 410
Score = 158 bits (399), Expect = 4e-36
Identities = 81/203 (39%), Positives = 124/203 (61%), Gaps = 1/203 (0%)
Frame = +3
Query: 75 VAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRN-RAKPNEYTLVSLFTAC 251
V++++FD M ++ SW++MI YA+S +A E+F M R+ + N TL ++ AC
Sbjct: 2177 VSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLAC 2236
Query: 252 AELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVATWN 431
A G+L+ G+ +H IK E V +GT++IDMY KCG +E AK+ F++M+ K+V +W
Sbjct: 2237 AHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWT 2296
Query: 432 AMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGILSACLQTGNIEKGRKYFYYMIEH 611
AM+ G+HGR +EAL F M R +KP+ IT +L+AC G +E+G +F M
Sbjct: 2297 AMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHK 2356
Query: 612 YGIKPSFEHYVCLFVMYSRAAKL 680
Y I+P EHY C+ ++ RA L
Sbjct: 2357 YDIEPGIEHYGCMVDLFGRAGCL 2379
Score = 117 bits (294), Expect = 7e-24
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 9/200 (4%)
Frame = +3
Query: 78 AQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRR--------NRAKPNEYTLV 233
A+ +FD++P+RNV SW++MI GY ++E + A LF + N + +V
Sbjct: 2069 ARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMV 2128
Query: 234 SLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIK 413
S+ +AC+ + + VH F +K GF+ + +G L+D Y+KCG +K+VF+ ME K
Sbjct: 2129 SVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK 2188
Query: 414 SVATWNAMITSLGVHGRYEEALAYFEDMER-MNIKPDAITLTGILSACLQTGNIEKGRKY 590
+WN+MI G EAL F M R + ++ +A+TL+ +L AC G + G+
Sbjct: 2189 DDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGK-- 2246
Query: 591 FYYMIEHYGIKPSFEHYVCL 650
I IK E+ VC+
Sbjct: 2247 ---CIHDQVIKMDLEYNVCV 2263
Score = 95.5 bits (236), Expect = 3e-17
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 19/197 (9%)
Frame = +3
Query: 21 VVSWTTLIAGLVYN-----------ERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPE 167
VV++ G+ YN + ++A + + NV+SW+++I A+ +
Sbjct: 1938 VVNFYECFDGITYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSV 1997
Query: 168 KAFELFAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALI 347
+A F+ +R+ P + +C+ L L GR HQ GFE +F+ +ALI
Sbjct: 1998 EALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALI 2057
Query: 348 DMYSKCGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDM--------ER 503
DMYSKCG L+ A+ +F+++ +++V +W +MIT + + + AL F+D +
Sbjct: 2058 DMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDG 2117
Query: 504 MNIKPDAITLTGILSAC 554
N+ D++ + +LSAC
Sbjct: 2118 NNVPLDSVVMVSVLSAC 2134
Score = 87.8 bits (216), Expect = 7e-15
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 35/242 (14%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
R+ A +F ++ ++W+ +I + E+A L+ M +++T +
Sbjct: 74 RIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIK 133
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEI----- 410
AC S+ LG+ VH IK GF VF+ LID Y KCG +A +VFEKM +
Sbjct: 134 ACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS 193
Query: 411 --------------------------KSVATWNAMITSLGVHGRYEEALAYFEDMERMNI 512
K+V +W AMI + + EEAL F+ M+ NI
Sbjct: 194 WTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
Query: 513 KPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYV----CLFVMYSRAAKL 680
P+ T+ ++ AC + G + GR I Y IK E V L MYS+ +
Sbjct: 254 FPNEYTMVSLIKACTEMGILTLGRG-----IHDYAIKNCIEIGVYLGTALIDMYSKCGSI 308
Query: 681 LD 686
D
Sbjct: 309 KD 310
Score = 79.0 bits (193), Expect = 3e-12
Identities = 39/133 (29%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
R+++A++ FD+M +NV SW+AM+ GY ++A ++F +M R KPN T VS+
Sbjct: 2276 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 2335
Query: 246 ACAELGSLKLG-RWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIK-SV 419
AC+ G ++ G W + K E G+ ++D++ + G L A + ++M++K
Sbjct: 2336 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF 2395
Query: 420 ATWNAMITSLGVH 458
W +++ + +H
Sbjct: 2396 VVWGSLLGACRIH 2408
>ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Capsella rubella]
gi|482559823|gb|EOA24014.1| hypothetical protein
CARUB_v10017228mg [Capsella rubella]
Length = 454
Score = 261 bits (666), Expect = 5e-67
Identities = 128/240 (53%), Positives = 173/240 (72%), Gaps = 7/240 (2%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KM +++VSWTTL+ GLV N ++D A+ +F++MP RNV SW+AMI Y K+ P++AF+L
Sbjct: 178 KMPGRSIVSWTTLLHGLVSNCQLDSAKIVFNQMPTRNVVSWTAMITAYVKNRRPDEAFQL 237
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ + KPNE+T+V+L A +LGSL +GRWVH + KNGF + FLGTALIDMYSK
Sbjct: 238 FRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSK 297
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDM-ERMNIKPDAITLTG 539
CGSL+ A++VF+ M+ KS+ATWN+MITSLGVHG EEAL F+DM E +++PDAIT G
Sbjct: 298 CGSLQDARKVFDVMQSKSLATWNSMITSLGVHGCGEEALCLFDDMEEEASVEPDAITFVG 357
Query: 540 ILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRA------AKLLDPKSSD 701
+LSAC TGN++ G KYF +MI+ YGI P EH C+ + +A + L+D SD
Sbjct: 358 VLSACANTGNVKDGLKYFTWMIQVYGISPIREHNACMIQLLEKALEEYEVSSLVDSMDSD 417
Score = 99.4 bits (246), Expect = 2e-18
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 31/236 (13%)
Frame = +3
Query: 78 AQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFTACAE 257
A +F+++ + ++W+ MI + + P +A LF M ++++ +++T + AC
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMLNHQSQFDKFTFPFVIKACLA 130
Query: 258 LGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEK------------ 401
SL+LG VH IK GF VF L+D+Y KCG L+ ++VF+K
Sbjct: 131 SSSLRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKLDLGRKVFDKMPGRSIVSWTTL 190
Query: 402 -------------------MEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDA 524
M ++V +W AMIT+ + R +EA F M+ ++KP+
Sbjct: 191 LHGLVSNCQLDSAKIVFNQMPTRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNE 250
Query: 525 ITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKLLDPK 692
T+ +L A Q G++ GR Y ++ + F L MYS+ L D +
Sbjct: 251 FTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLG-TALIDMYSKCGSLQDAR 305
>ref|NP_189297.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75275188|sp|Q38959.1|PP257_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g26630, chloroplastic; Flags: Precursor
gi|1402883|emb|CAA66814.1| hypothetical protein
[Arabidopsis thaliana] gi|1495263|emb|CAA66119.1| orf09
[Arabidopsis thaliana] gi|11994298|dbj|BAB01728.1|
unnamed protein product [Arabidopsis thaliana]
gi|20466384|gb|AAM20509.1| unknown protein [Arabidopsis
thaliana] gi|23198064|gb|AAN15559.1| unknown protein
[Arabidopsis thaliana] gi|332643668|gb|AEE77189.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 455
Score = 259 bits (663), Expect = 1e-66
Identities = 123/227 (54%), Positives = 170/227 (74%), Gaps = 1/227 (0%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KM +++VSWTT++ GLV N ++D A+ +F++MPMRNV SW+AMI Y K+ P++AF+L
Sbjct: 179 KMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQL 238
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ + KPNE+T+V+L A +LGSL +GRWVH + KNGF + FLGTALIDMYSK
Sbjct: 239 FRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSK 298
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDM-ERMNIKPDAITLTG 539
CGSL+ A++VF+ M+ KS+ATWN+MITSLGVHG EEAL+ FE+M E +++PDAIT G
Sbjct: 299 CGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVG 358
Query: 540 ILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
+LSAC TGN++ G +YF MI+ YGI P EH C+ + +A ++
Sbjct: 359 VLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEV 405
Score = 91.7 bits (226), Expect = 5e-16
Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Frame = +3
Query: 78 AQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMR-RNRAKPNEYTLVSLFTACA 254
A +F+++ + ++W+ MI + + P +A LF M ++++ +++T + AC
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACL 130
Query: 255 ELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEK----------- 401
S++LG VH IK GF VF L+D+Y KCG + ++VF+K
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTT 190
Query: 402 --------------------MEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPD 521
M +++V +W AMIT+ + R +EA F M+ ++KP+
Sbjct: 191 MLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPN 250
Query: 522 AITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKLLDPK 692
T+ +L A Q G++ GR Y ++ + F L MYS+ L D +
Sbjct: 251 EFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLG-TALIDMYSKCGSLQDAR 306
>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322823|gb|EFH53244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 451
Score = 257 bits (656), Expect = 7e-66
Identities = 124/234 (52%), Positives = 172/234 (73%), Gaps = 1/234 (0%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KM +++VSWTT++ GLV N ++D A+ +F++MP RNV SW+AMI Y K+ P++AF+L
Sbjct: 178 KMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPTRNVVSWTAMITAYVKNRRPDEAFQL 237
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ + KPNE+T+V+L A +LGSL +GRWVH + KNGF + +LGTALIDMYSK
Sbjct: 238 FRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCYLGTALIDMYSK 297
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDM-ERMNIKPDAITLTG 539
CGSL+ A++VF+ M+ KS+ATWN+MITSLGVHG EEAL FE+M E +++PDAIT G
Sbjct: 298 CGSLQDARKVFDVMQSKSLATWNSMITSLGVHGCGEEALYLFEEMEEEASVEPDAITFVG 357
Query: 540 ILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKLLDPKSSD 701
+LSAC TGN++ G +YF MI+ YGI P EH C+ + +A ++ K+SD
Sbjct: 358 VLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEM--EKASD 409
Score = 95.1 bits (235), Expect = 5e-17
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 35/240 (14%)
Frame = +3
Query: 78 AQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFTACAE 257
A +F+++ + ++W+ MI + + P +A LF M ++ + +++T + AC
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIRSLSLNHKPREALLLFILMLSHQPQFDKFTFPFVIKACLA 130
Query: 258 LGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEK------------ 401
SL+LG VH IK GF VF L+D+Y KCG + ++VF+K
Sbjct: 131 SSSLRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDCGRKVFDKMPGRSIVSWTTM 190
Query: 402 -------------------MEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDA 524
M ++V +W AMIT+ + R +EA F M+ ++KP+
Sbjct: 191 LYGLVSNSQLDSAEIVFNQMPTRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNE 250
Query: 525 ITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSF--EHYV--CLFVMYSRAAKLLDPK 692
T+ +L A Q G++ GR + Y K F + Y+ L MYS+ L D +
Sbjct: 251 FTIVNLLQASTQLGSLSMGR-----WVHDYAHKNGFVLDCYLGTALIDMYSKCGSLQDAR 305
>ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutrema salsugineum]
gi|557092177|gb|ESQ32824.1| hypothetical protein
EUTSA_v10004197mg [Eutrema salsugineum]
Length = 453
Score = 253 bits (645), Expect = 1e-64
Identities = 119/223 (53%), Positives = 160/223 (71%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KM +T+VSWTT++ GLV N ++D A+ +F++MP RNV SW+AMI Y K+ P++AF+L
Sbjct: 178 KMPGRTIVSWTTMLYGLVSNSQLDSAEIIFNQMPTRNVVSWTAMITAYVKNCRPDEAFQL 237
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M+ + KPNE+T+VS+ A +LGSL +GRWVH + KNGF + FLGTALIDMYSK
Sbjct: 238 FRRMQVDEVKPNEFTIVSMLQASTQLGSLSMGRWVHDYAHKNGFPLDCFLGTALIDMYSK 297
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGSL+ A +VF+ M+ KS+ATWN+MITSLGVHG EEAL ++ ME ++PDAIT G+
Sbjct: 298 CGSLQDAWKVFDAMQSKSLATWNSMITSLGVHGCGEEALDLYDQMEEAGVEPDAITFVGV 357
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRA 671
LSAC GN++ G +YF MI Y I P EH C+ + +A
Sbjct: 358 LSACANIGNVKDGLRYFVRMIHVYSINPIQEHNACMIQLLEQA 400
Score = 95.5 bits (236), Expect = 3e-17
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 31/234 (13%)
Frame = +3
Query: 78 AQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFTACAE 257
A +F ++ + ++W+ MI + ++ P +A LF M ++++ +++T + AC
Sbjct: 71 ASLVFSQLQSPSTFTWNLMIRSLSVNDKPREALLLFILMLSHQSQLDKFTFPFVIKACLA 130
Query: 258 LGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEK------------ 401
SL+LG VH IK+GF VF L+D+Y KCG + ++VF+K
Sbjct: 131 SSSLRLGTQVHGLAIKSGFFSDVFFQNTLMDLYLKCGKPDCGRKVFDKMPGRTIVSWTTM 190
Query: 402 -------------------MEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDA 524
M ++V +W AMIT+ + R +EA F M+ +KP+
Sbjct: 191 LYGLVSNSQLDSAEIIFNQMPTRNVVSWTAMITAYVKNCRPDEAFQLFRRMQVDEVKPNE 250
Query: 525 ITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKLLD 686
T+ +L A Q G++ GR Y ++ G L MYS+ L D
Sbjct: 251 FTIVSMLQASTQLGSLSMGRWVHDYAHKN-GFPLDCFLGTALIDMYSKCGSLQD 303
>ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [Amborella trichopoda]
gi|548847192|gb|ERN06396.1| hypothetical protein
AMTR_s00016p00252780 [Amborella trichopoda]
Length = 428
Score = 251 bits (641), Expect = 4e-64
Identities = 121/216 (56%), Positives = 156/216 (72%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
KM VK+VVSWTT++AGLV + M A+R+FD+MP RNV SW+AMI+GY ++ P +A EL
Sbjct: 189 KMSVKSVVSWTTMVAGLVSHGDMASARRVFDEMPERNVVSWTAMIHGYVRNNQPHEALEL 248
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F M R +PNE+T+VSL C L SL+LGRWVH+F K+GFE+ V+LGTALIDMYS
Sbjct: 249 FILMLRANVRPNEFTIVSLLLVCTSLNSLRLGRWVHEFMAKSGFELSVYLGTALIDMYSN 308
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGS+ AK VF+ M +SVATWN+MITSLGVHG+ +EAL F ME+ ++PD IT G+
Sbjct: 309 CGSINDAKNVFDGMSERSVATWNSMITSLGVHGKGKEALNVFGAMEKGKVRPDDITFVGV 368
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCL 650
L AC+ G +E+G YF M YGI P+ EH C+
Sbjct: 369 LCACVNMGLVEEGGVYFDSMYSVYGIVPTLEHCRCM 404
Score = 101 bits (251), Expect = 6e-19
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 31/252 (12%)
Frame = +3
Query: 33 TTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAK 212
T LI ++++D A +F+++ ++W+ MI Y KS PE+A ++ M +
Sbjct: 67 TKLINLCSIHQKIDHATLVFNQIENPLTFTWNTMIRAYFKSNYPEEAILMYNLMVIHGFL 126
Query: 213 PNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRV 392
P+++T + AC SL+ G+ +H IK G +FL L+++Y KC A ++
Sbjct: 127 PDKFTYPFVIKACVAFSSLEKGKEIHGRAIKAGMVPDIFLQNTLMELYMKCNEKTLAHKL 186
Query: 393 FEKMEIKSVATWNAMITSLGVHG-------------------------------RYEEAL 479
F+KM +KSV +W M+ L HG + EAL
Sbjct: 187 FDKMSVKSVVSWTTMVAGLVSHGDMASARRVFDEMPERNVVSWTAMIHGYVRNNQPHEAL 246
Query: 480 AYFEDMERMNIKPDAITLTGILSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVM 659
F M R N++P+ T+ +L C ++ GR +M + G + S L M
Sbjct: 247 ELFILMLRANVRPNEFTIVSLLLVCTSLNSLRLGRWVHEFMAKS-GFELSVYLGTALIDM 305
Query: 660 YSRAAKLLDPKS 695
YS + D K+
Sbjct: 306 YSNCGSINDAKN 317
>gb|EOY25899.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 723
Score = 213 bits (541), Expect = 1e-52
Identities = 99/226 (43%), Positives = 149/226 (65%)
Frame = +3
Query: 3 KMRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFEL 182
+M+ K V+SWTT+++G V +D+A+ FD+MP R+ SW+AMI+GY + ++A L
Sbjct: 279 RMKTKDVISWTTIVSGFVNKGEIDLARDYFDRMPERDYVSWTAMIDGYLRVNCFKEALVL 338
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
F EM+ +P+E+T+VS+ TACA+LG+L++G W+ + +N + VF+G ALIDMY K
Sbjct: 339 FREMQALNIRPDEFTMVSILTACAQLGALQIGEWIKTYIERNKVKNDVFVGNALIDMYFK 398
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CGS+E A+RVF M + TW AMI L ++G EEAL F +M R +IKPD +T G+
Sbjct: 399 CGSIEKAQRVFNGMPWRDKFTWTAMIFGLAINGHGEEALGMFSEMLRASIKPDEVTYIGV 458
Query: 543 LSACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
L AC G +++GRK+F M +G++P+ HY C+ + RA L
Sbjct: 459 LCACTHAGMVDEGRKFFASMTTEHGVQPNVAHYGCMVDLLGRAGHL 504
Score = 121 bits (303), Expect = 6e-25
Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 31/203 (15%)
Frame = +3
Query: 66 RMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFT 245
+M++A+ +FD R+V +W+ +I GY + + ++ +LF EM RN P TLVSL +
Sbjct: 168 QMEMARAVFDVSCKRDVITWNVIITGYNRMKQYDETNKLFDEMERNGMVPTSVTLVSLLS 227
Query: 246 ACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVAT 425
AC++L L++G+ VH++ K E + L AL+DMY+ CG ++ A R+F++M+ K V +
Sbjct: 228 ACSKLKDLEVGKRVHKYIQKCKVESNLTLENALMDMYAACGEMDVAVRIFDRMKTKDVIS 287
Query: 426 WNAMITSLGVHGR-------------------------------YEEALAYFEDMERMNI 512
W +++ G ++EAL F +M+ +NI
Sbjct: 288 WTTIVSGFVNKGEIDLARDYFDRMPERDYVSWTAMIDGYLRVNCFKEALVLFREMQALNI 347
Query: 513 KPDAITLTGILSACLQTGNIEKG 581
+PD T+ IL+AC Q G ++ G
Sbjct: 348 RPDEFTMVSILTACAQLGALQIG 370
Score = 116 bits (290), Expect = 2e-23
Identities = 64/200 (32%), Positives = 109/200 (54%), Gaps = 3/200 (1%)
Frame = +3
Query: 12 VKTVVSWTTLIAGLVYNERMDV--AQRMFDKMPM-RNVYSWSAMINGYAKSENPEKAFEL 182
++ +S LI+ NE D+ A +MF+++ ++V+ W+ MI GY++ + P+ +
Sbjct: 46 IRKPISQNKLISFCCTNESGDMNHALQMFNQISEPKSVFLWNTMIKGYSRVDCPKHGISM 105
Query: 183 FAEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSK 362
+ M + KP++YT L L G+ +H +K GF VF+ ALI MYS
Sbjct: 106 YLNMLKQDVKPDDYTFPFLLKGFDRDVGLSCGKKLHGHAVKFGFGSNVFVQNALIHMYSL 165
Query: 363 CGSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGI 542
CG +E A+ VF+ + V TWN +IT +Y+E F++MER + P ++TL +
Sbjct: 166 CGQMEMARAVFDVSCKRDVITWNVIITGYNRMKQYDETNKLFDEMERNGMVPTSVTLVSL 225
Query: 543 LSACLQTGNIEKGRKYFYYM 602
LSAC + ++E G++ Y+
Sbjct: 226 LSACSKLKDLEVGKRVHKYI 245
>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 212 bits (539), Expect = 3e-52
Identities = 99/225 (44%), Positives = 147/225 (65%)
Frame = +3
Query: 6 MRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELF 185
M + ++SWTT+++G +DVA+ FDKMP ++ SW+AMI+GY +S ++A ELF
Sbjct: 301 MNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELF 360
Query: 186 AEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKC 365
M+ KP+E+T+VS+ TACA LG+L+LG W+ + +N + +F+ ALIDMY KC
Sbjct: 361 RNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKC 420
Query: 366 GSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGIL 545
G ++ A+ +F +M + TW AMI L V+G E+AL F +M + +I PD IT G+L
Sbjct: 421 GDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVL 480
Query: 546 SACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
SAC TG ++KGRKYF M +GI+P+ HY CL + +RA +L
Sbjct: 481 SACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRL 525
Score = 125 bits (313), Expect = 4e-26
Identities = 62/175 (35%), Positives = 100/175 (57%)
Frame = +3
Query: 78 AQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFTACAE 257
A+R+FD++P N++ W+ MI GY++ + P+ L+ EM R KP+ YT LF
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151
Query: 258 LGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVATWNAM 437
+L+ GR +H +K+G + VF+ TAL+ MY CG L+ A+ VF+ V TWN +
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 211
Query: 438 ITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGILSACLQTGNIEKGRKYFYYM 602
I++ G++EE+ F ME + P +TL +LSAC + ++ G+K Y+
Sbjct: 212 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Score = 105 bits (263), Expect = 3e-20
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Frame = +3
Query: 33 TTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAK 212
T L+ + ++D A+ +FD P +V +W+ +I+ Y K E++ LF M +
Sbjct: 178 TALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVL 237
Query: 213 PNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKC--------- 365
P TLV + +AC++L L+ G+ VH + E + L A+IDMY+ C
Sbjct: 238 PTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGI 297
Query: 366 ----------------------GSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEAL 479
G ++ A+ F+KM K +W AMI R++EAL
Sbjct: 298 FRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEAL 357
Query: 480 AYFEDMERMNIKPDAITLTGILSACLQTGNIEKG 581
F +M+ N+KPD T+ +L+AC G +E G
Sbjct: 358 ELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 391
>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 212 bits (539), Expect = 3e-52
Identities = 99/225 (44%), Positives = 147/225 (65%)
Frame = +3
Query: 6 MRVKTVVSWTTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELF 185
M + ++SWTT+++G +DVA+ FDKMP ++ SW+AMI+GY +S ++A ELF
Sbjct: 280 MNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELF 339
Query: 186 AEMRRNRAKPNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKC 365
M+ KP+E+T+VS+ TACA LG+L+LG W+ + +N + +F+ ALIDMY KC
Sbjct: 340 RNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKC 399
Query: 366 GSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGIL 545
G ++ A+ +F +M + TW AMI L V+G E+AL F +M + +I PD IT G+L
Sbjct: 400 GDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVL 459
Query: 546 SACLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRAAKL 680
SAC TG ++KGRKYF M +GI+P+ HY CL + +RA +L
Sbjct: 460 SACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRL 504
Score = 125 bits (313), Expect = 4e-26
Identities = 62/175 (35%), Positives = 100/175 (57%)
Frame = +3
Query: 78 AQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAKPNEYTLVSLFTACAE 257
A+R+FD++P N++ W+ MI GY++ + P+ L+ EM R KP+ YT LF
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 258 LGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKCGSLEYAKRVFEKMEIKSVATWNAM 437
+L+ GR +H +K+G + VF+ TAL+ MY CG L+ A+ VF+ V TWN +
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 190
Query: 438 ITSLGVHGRYEEALAYFEDMERMNIKPDAITLTGILSACLQTGNIEKGRKYFYYM 602
I++ G++EE+ F ME + P +TL +LSAC + ++ G+K Y+
Sbjct: 191 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
Score = 105 bits (263), Expect = 3e-20
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Frame = +3
Query: 33 TTLIAGLVYNERMDVAQRMFDKMPMRNVYSWSAMINGYAKSENPEKAFELFAEMRRNRAK 212
T L+ + ++D A+ +FD P +V +W+ +I+ Y K E++ LF M +
Sbjct: 157 TALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVL 216
Query: 213 PNEYTLVSLFTACAELGSLKLGRWVHQFTIKNGFEIGVFLGTALIDMYSKC--------- 365
P TLV + +AC++L L+ G+ VH + E + L A+IDMY+ C
Sbjct: 217 PTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGI 276
Query: 366 ----------------------GSLEYAKRVFEKMEIKSVATWNAMITSLGVHGRYEEAL 479
G ++ A+ F+KM K +W AMI R++EAL
Sbjct: 277 FRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEAL 336
Query: 480 AYFEDMERMNIKPDAITLTGILSACLQTGNIEKG 581
F +M+ N+KPD T+ +L+AC G +E G
Sbjct: 337 ELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 370