BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00026042
         (637 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22376.3| unnamed protein product [Vitis vinifera]               93   6e-17
emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]    92   2e-16
ref|XP_006487703.1| PREDICTED: pentatricopeptide repeat-containi...    86   1e-14
ref|XP_006442666.1| hypothetical protein CICLE_v10019470mg [Citr...    85   2e-14
ref|XP_004237158.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_006361412.1| PREDICTED: pentatricopeptide repeat-containi...    69   9e-10
ref|XP_002521979.1| pentatricopeptide repeat-containing protein,...    66   7e-09
gb|EOY10910.1| Pentatricopeptide repeat superfamily protein, put...    65   2e-08
gb|EXB93168.1| hypothetical protein L484_024506 [Morus notabilis]      62   1e-07
ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containi...    57   6e-06

>emb|CBI22376.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 63/145 (43%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
 Frame = +3

Query: 210 MAYTVLPQKSMLEVHNLHRSSQADLNYGSSQYSH-KRVLVPFSCSLVRNCKKQSDLQRTE 386
           M  TV+  KS+ EV  LH   Q DL   S + S  K      +CS+  N K QS LQ   
Sbjct: 1   MELTVIAHKSITEVPCLH-GFQTDLTSASDRCSPVKSQAFQLNCSVNCNFKTQSYLQWKG 59

Query: 387 IYGTGATMSFLKCEMQQTGVSLDNSSEGSQEEWKSNRYTMGVEKKLNGR--SSKYAYPSK 560
            + +      L+C  Q+  V +D  + G  +EW S RY  GVEKKL  +  S KY+  S 
Sbjct: 60  DHVSRRNALLLRCIGQERSVCIDRVN-GEDQEWSSGRYAFGVEKKLREQMSSKKYSNSSN 118

Query: 561 YSLDGPFVENDEETNNEILQSFCSR 635
            SLDG FV NDEETNNEILQ+ CS+
Sbjct: 119 SSLDGSFVGNDEETNNEILQNLCSK 143


>emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
          Length = 550

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 62/145 (42%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
 Frame = +3

Query: 210 MAYTVLPQKSMLEVHNLHRSSQADLNYGSSQYSH-KRVLVPFSCSLVRNCKKQSDLQRTE 386
           M  TV+  KS+ EV  LH   Q DL+  S + S  K      +CS+  N K QS LQ   
Sbjct: 1   MELTVIAHKSITEVPCLH-GFQTDLSSASDRCSPVKSQAFHLNCSVNCNFKTQSYLQWKG 59

Query: 387 IYGTGATMSFLKCEMQQTGVSLDNSSEGSQEEWKSNRYTMGVEKKLNGR--SSKYAYPSK 560
            + +      L+C  Q+  V +D  + G  +EW S RY  GVEKKL  +  S KY+  S 
Sbjct: 60  DHVSRRNALLLRCIGQERSVCIDRVN-GEDQEWSSGRYAFGVEKKLREQMSSKKYSNSSN 118

Query: 561 YSLDGPFVENDEETNNEILQSFCSR 635
            S DG FV NDEETNNEILQ+ CS+
Sbjct: 119 SSFDGSFVGNDEETNNEILQNLCSK 143


>ref|XP_006487703.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like isoform X1 [Citrus sinensis]
           gi|568868940|ref|XP_006487704.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08610-like isoform X2 [Citrus sinensis]
           gi|568868942|ref|XP_006487705.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08610-like isoform X3 [Citrus sinensis]
          Length = 577

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 58/144 (40%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
 Frame = +3

Query: 210 MAYTVLPQKSMLEVHNLHRSSQADLNYGSSQYSHKRVLVPFSCSLVRNCKKQSDLQRTEI 389
           M YTV+P  S++E+H L      +L + S Q S +         +V N + Q   Q  ++
Sbjct: 1   MGYTVVPPNSIIELHCL-----PNLQWCSRQVSLQH-------GVVNNHRTQFYSQLRDL 48

Query: 390 YGTGATMSFLKCEMQQTGVSLDNSSEGSQEEWKSNRYTMGVEKKLNGRS--SKYAYPSKY 563
            G G  +S LKC      V +D  +E  Q+EW S  + + V KKL G +   K   PS  
Sbjct: 49  -GAGRNVS-LKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHNPSLP 106

Query: 564 SLDGPFVENDEETNNEILQSFCSR 635
           S DGPFVENDE+TNN+ILQ+FCSR
Sbjct: 107 SSDGPFVENDEKTNNKILQNFCSR 130


>ref|XP_006442666.1| hypothetical protein CICLE_v10019470mg [Citrus clementina]
           gi|567900358|ref|XP_006442667.1| hypothetical protein
           CICLE_v10019470mg [Citrus clementina]
           gi|557544928|gb|ESR55906.1| hypothetical protein
           CICLE_v10019470mg [Citrus clementina]
           gi|557544929|gb|ESR55907.1| hypothetical protein
           CICLE_v10019470mg [Citrus clementina]
          Length = 577

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 58/144 (40%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
 Frame = +3

Query: 210 MAYTVLPQKSMLEVHNLHRSSQADLNYGSSQYSHKRVLVPFSCSLVRNCKKQSDLQRTEI 389
           M YTV+P  S++E+H L      +L + S Q S +         +V N + Q   Q  ++
Sbjct: 1   MGYTVVPPNSIIELHCL-----PNLQWCSRQVSLQH-------GVVNNHRTQFYSQLRDL 48

Query: 390 YGTGATMSFLKCEMQQTGVSLDNSSEGSQEEWKSNRYTMGVEKKLNGRS--SKYAYPSKY 563
            G G  +S LKC      V +D  +E  Q+EW S  + + V KKL G +   K   PS  
Sbjct: 49  -GAGRNVS-LKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLP 106

Query: 564 SLDGPFVENDEETNNEILQSFCSR 635
           S DGPFVENDE+TNN+ILQ+FCSR
Sbjct: 107 SSDGPFVENDEKTNNKILQNFCSR 130


>ref|XP_004237158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Solanum lycopersicum]
          Length = 580

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 58/147 (39%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
 Frame = +3

Query: 219 TVLPQKSMLEVHNLH----RSSQADLNYGSSQYSHKRVLVPFSCSLVR-----NCKKQSD 371
           T++P K M     LH     SSQ DL  GSSQ     +L+     L+R     N   QS 
Sbjct: 3   TLVP-KLMTGTPTLHIQNSSSSQIDLQTGSSQ----SLLIKTPAILLRHSFRGNFSDQSS 57

Query: 372 LQRTEIYGTGATMSFLKCEMQQTGVSLDNSSEGSQEEWKSNRYTMGVEKKLNGRSSKYAY 551
           LQ   + G+G T S L C  +Q  V LD   EG+      +     VEK  N +  K + 
Sbjct: 58  LQWHGVLGSGKTGSILSCN-KQGSVCLDRVKEGTNGSLNGD-----VEKISNEQFKKLSS 111

Query: 552 PSKYSLDGPFVENDEETNNEILQSFCS 632
             + +LDGP VENDE TNN+IL+SFCS
Sbjct: 112 SLRLTLDGPLVENDETTNNKILRSFCS 138


>ref|XP_006361412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like isoform X1 [Solanum tuberosum]
           gi|565391405|ref|XP_006361413.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08610-like isoform X2 [Solanum tuberosum]
           gi|565391407|ref|XP_006361414.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08610-like isoform X3 [Solanum tuberosum]
          Length = 581

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 57/148 (38%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
 Frame = +3

Query: 219 TVLPQKSMLEVHNLH----RSSQADLNYGSSQYSHKRVLVPFSCSLVR-----NCKKQSD 371
           T++P K M+    LH     S Q DL  G+S    K +L+     L+R     N   QS 
Sbjct: 3   TLVP-KLMIGTPTLHIQNSSSGQIDLQTGNS----KSLLIKTPAILLRHSFRGNFSSQSS 57

Query: 372 LQRTEIYGTGATMSFLKCEMQQTGVSLDNSSEGSQEEWKSNRYTMGVEKKLNGRSSKYAY 551
           LQ   + G+G T S L C  +Q  V LD   EG+     +      VEK+ N +  K   
Sbjct: 58  LQWHGVLGSGKTGSILSCN-KQGSVCLDKVKEGT-----NGSLNRDVEKRSNEQQLKKLS 111

Query: 552 PS-KYSLDGPFVENDEETNNEILQSFCS 632
            S + +LDGP VENDE TNN+IL+SFCS
Sbjct: 112 SSLRLTLDGPLVENDETTNNKILRSFCS 139


>ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538783|gb|EEF40383.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = +3

Query: 357 KKQSDLQRTEIYGTGATMSFLKCEMQQTGVSLDNSSEGSQEEWKSNRYTMGVEKKLNGR- 533
           K QS L+RT    +G T+  L+C+  Q  VS+D   +   ++W S    + V +K   + 
Sbjct: 18  KNQSCLKRTGDLHSGRTLFPLQCKGLQKSVSIDKVDKNDHDDWSSETLVLDVGRKFREQM 77

Query: 534 -SSKYAYPSKYSLDGPFVENDEETNNEILQSFCSR 635
            +  +  P  Y ++GPFVEN+EE NNEILQ  C++
Sbjct: 78  NTKNHVSPKSY-IEGPFVENEEEINNEILQHLCNK 111


>gb|EOY10910.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 595

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
 Frame = +3

Query: 210 MAYTVLPQKSMLEVHNLHRS----SQADLNYGSSQYSHKRVLV-PFSCSLVRNCKKQSDL 374
           M Y   P+ S +E+ + H S     Q  L   S +YS  +V    F+CS+  + + QS L
Sbjct: 1   MGYAATPRSSPVEICHFHGSPWGLKQPGLCCSSWKYSTVKVSTCHFTCSIKYSRRSQSCL 60

Query: 375 QRTEIYGTGATMSFLKCEMQQTGVSLDNSSEGSQEEW-KSNRYTMGVEKKLNGRSSKYAY 551
                 G+      L+    Q  V +D + E  Q+EW +S  +   V++K   + +    
Sbjct: 61  PWKVDNGSEREAFSLQFRALQRSVCIDRN-EIDQDEWGRSEDHISRVKRKFKEQINSKKL 119

Query: 552 PSKYS--LDGPFVENDEETNNEILQSFCS 632
           P+  +   DGPFV NDEETNN ILQ FCS
Sbjct: 120 PNSVTSVFDGPFVRNDEETNNNILQKFCS 148


>gb|EXB93168.1| hypothetical protein L484_024506 [Morus notabilis]
          Length = 594

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
 Frame = +3

Query: 312 KRVLVPFSCSLVRNCKKQSDLQRTEIYGTGATMSFLKCEMQQTGVSLDNSSEGSQEEWKS 491
           K  ++  +C    N   Q  L+    + +  +  F  C   Q  VS+ +  E  Q+EW S
Sbjct: 35  KMSVLHINCLNKNNHSTQFPLRWRLDFSSKRSAHFSGCVSLQRSVSVSSLDEVEQDEWTS 94

Query: 492 NRYTMGVEKKLN-GRSS--KYAYPSKYSLDGPFVENDEETNNEILQSFCSR 635
           + Y M VE+K+  G SS  +   PS  +L+G FV N+E+TNN+IL+ FC+R
Sbjct: 95  DSYEMDVERKIGQGTSSTRRPHEPSTLNLEGRFVGNNEKTNNDILRHFCTR 145


>ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
           gi|449516715|ref|XP_004165392.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
          Length = 594

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
 Frame = +3

Query: 210 MAYTVLPQKSMLEVHNLHRSSQ---ADLNYGSSQYSHKRVLVPFSCSLVRNCKKQSD--- 371
           MAY +  Q  M+ V+ LH  S+   A    G      ++   P S  L   CK   +   
Sbjct: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEK---PSSLHLYGLCKTSFNGSY 57

Query: 372 -LQRTEIYGTGATMSFLKCEMQQTGVSLDNSSEGSQEEWKSNRYTMGVEKKLNGRSSKYA 548
               +   G G     L  +  Q  V +D   +  ++E   N + + VE+  + + +K  
Sbjct: 58  SCHWSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKR 117

Query: 549 YPS----KYSLDGPFVENDEETNNEILQSFC 629
           + S       LDGPFV NDEETNN ILQ FC
Sbjct: 118 FGSHNCSSLYLDGPFVGNDEETNNVILQKFC 148