BLASTX nr result
ID: Rehmannia26_contig00024442
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00024442
(337 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citr... 91 1e-16
emb|CBI32614.3| unnamed protein product [Vitis vinifera] 84 2e-14
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus pe... 82 6e-14
ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Popu... 82 1e-13
ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily p... 76 4e-12
gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis] 76 5e-12
ref|XP_002525184.1| pentatricopeptide repeat-containing protein,... 75 1e-11
gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlise... 72 8e-11
ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi... 70 4e-10
ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thalian... 69 5e-10
dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana] 69 5e-10
gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus... 68 1e-09
ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutr... 67 2e-09
>ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citrus clementina]
gi|568853953|ref|XP_006480600.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Citrus sinensis]
gi|557530935|gb|ESR42118.1| hypothetical protein
CICLE_v10011148mg [Citrus clementina]
Length = 740
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/107 (46%), Positives = 62/107 (57%)
Frame = -1
Query: 325 HTLSLHWVAPPPPSSTALFVXXXXXXXXXXXXXXSFRVQTAKNPSNASLSSATPSNKFSG 146
H LS H V+PPPP+ FRVQ + S + + ++ SN +
Sbjct: 17 HALSPHCVSPPPPTPP-------------YPPTRPFRVQATTDLSLTTTNPSSNSNNNTN 63
Query: 145 SQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLSYLNTT 5
++LLTLL+QRKTEEAW+ Y Q LPNPTCLSRLVSQLSY NTT
Sbjct: 64 DDQKILLTLLRQRKTEEAWIKYTQSTYLPNPTCLSRLVSQLSYQNTT 110
>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/64 (64%), Positives = 48/64 (75%)
Frame = -1
Query: 199 NPSNASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLS 20
NP++ S + T + S +Q LLTLL+QRKTEEAWL Y QC QLP+PTCLSRLVSQLS
Sbjct: 69 NPTSVSFITTTTATTPHHSLNQTLLTLLRQRKTEEAWLTYVQCTQLPSPTCLSRLVSQLS 128
Query: 19 YLNT 8
Y NT
Sbjct: 129 YQNT 132
>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Vitis vinifera]
Length = 749
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/64 (64%), Positives = 48/64 (75%)
Frame = -1
Query: 199 NPSNASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLS 20
NP++ S + T + S +Q LLTLL+QRKTEEAWL Y QC QLP+PTCLSRLVSQLS
Sbjct: 61 NPTSVSFITTTTATTPHHSLNQTLLTLLRQRKTEEAWLTYVQCTQLPSPTCLSRLVSQLS 120
Query: 19 YLNT 8
Y NT
Sbjct: 121 YQNT 124
>ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Solanum tuberosum]
Length = 738
Score = 83.6 bits (205), Expect = 3e-14
Identities = 46/74 (62%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -1
Query: 220 FRVQTAKNPSNASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQ--CAQLPNPTC 47
F+ NPSN + S T N FS S D LLTLLQQRKT+EAWL Y + QLPNPTC
Sbjct: 44 FQPHPTSNPSNPT-SLITSKNSFSASPDNTLLTLLQQRKTDEAWLYYTKNLDQQLPNPTC 102
Query: 46 LSRLVSQLSYLNTT 5
LSRLVSQLSY N+T
Sbjct: 103 LSRLVSQLSYQNST 116
>gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus persica]
Length = 740
Score = 82.4 bits (202), Expect = 6e-14
Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Frame = -1
Query: 331 ATHT-LSLHWVAPPP-PSSTALFVXXXXXXXXXXXXXXSFRV-QTAKNPSNASLSSATPS 161
ATH+ L+LHWV+ P PSS + FR+ TA P+N + + +
Sbjct: 21 ATHSSLTLHWVSSPHYPSSIS-------------SPTRPFRLLATANPPTNPTSDLSLAA 67
Query: 160 NKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLSYLNT 8
++DQ LLTLL+QRKTEEAW+ Y Q LPNPTCLSRL+SQLSY N+
Sbjct: 68 TAALPNEDQKLLTLLRQRKTEEAWIAYTQSTHLPNPTCLSRLLSQLSYQNS 118
>ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Populus trichocarpa]
gi|550321129|gb|EEF04616.2| hypothetical protein
POPTR_0016s08650g [Populus trichocarpa]
Length = 724
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Frame = -1
Query: 199 NPSNASLSSAT--PSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQ 26
NP+ LS AT P++ S S DQ LL+LL+QRKTEEAW+LY Q LP PTCLSRLVSQ
Sbjct: 27 NPTTKDLSLATSIPTSITSSSNDQTLLSLLRQRKTEEAWVLYTQTPHLPPPTCLSRLVSQ 86
Query: 25 LSYLNT 8
LSY NT
Sbjct: 87 LSYQNT 92
>ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 743
Score = 80.9 bits (198), Expect = 2e-13
Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 10/117 (8%)
Frame = -1
Query: 328 THTLSLHWVAPPPPSSTALFVXXXXXXXXXXXXXXSFRVQ-TAKNPSNAS----LSSATP 164
+H+L+LH V+ P ST FR+ TA P+N + L++ T
Sbjct: 20 SHSLTLHRVSFPSSISTPT---------------RPFRLHATASTPANPAADFTLTTVTA 64
Query: 163 SNKFSG-----SQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLSYLNT 8
++ G ++DQ LLTLL+QRKTEEAW+LY Q + LPNPTCLSRL+SQLSY NT
Sbjct: 65 ADDDDGDTPVSNEDQKLLTLLRQRKTEEAWILYTQYSHLPNPTCLSRLLSQLSYQNT 121
>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
gi|449483612|ref|XP_004156638.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
Length = 736
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = -1
Query: 208 TAKNPSNASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVS 29
TA+ S+ LS + S+ S S +Q LL LL+QRKT+EAW+ Y QC LP+PTCLSRLVS
Sbjct: 47 TARRTSSTDLSLLSDSS--SSSLEQRLLLLLRQRKTDEAWITYTQCNDLPSPTCLSRLVS 104
Query: 28 QLSYLNT 8
QLSY NT
Sbjct: 105 QLSYQNT 111
>gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 758
Score = 76.3 bits (186), Expect = 4e-12
Identities = 44/103 (42%), Positives = 58/103 (56%)
Frame = -1
Query: 316 SLHWVAPPPPSSTALFVXXXXXXXXXXXXXXSFRVQTAKNPSNASLSSATPSNKFSGSQD 137
+LHW++PPPPS+T + Q ++ SLS+ +N D
Sbjct: 27 TLHWLSPPPPSATTATTTSKPARLCRLEATAHQQTQPT---ADFSLSTDRKTNN-----D 78
Query: 136 QVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLSYLNT 8
Q LL+LL+QRKTE+AW Y+Q LP PTCLSRLV+QLSY T
Sbjct: 79 QTLLSLLRQRKTEQAWDHYSQSPHLPTPTCLSRLVAQLSYQTT 121
>gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]
Length = 749
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/70 (58%), Positives = 49/70 (70%)
Frame = -1
Query: 217 RVQTAKNPSNASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSR 38
R+Q + N SN + + + S K SQDQ LL LL+QRKTEEAWL Y + LP+ TCLSR
Sbjct: 48 RIQASTN-SNTNTNLSLSSTKQPISQDQALLYLLRQRKTEEAWLAYTHSSHLPSSTCLSR 106
Query: 37 LVSQLSYLNT 8
LVSQLSY NT
Sbjct: 107 LVSQLSYQNT 116
>ref|XP_002525184.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535481|gb|EEF37150.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 740
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = -1
Query: 220 FRVQTAKNPSNASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLS 41
FR+ TA P + SL++AT + DQ LL+LL+QR+T++AW+ Y+Q LPNPTCLS
Sbjct: 42 FRLYTATTP-DLSLTTAT-------NNDQTLLSLLRQRETDKAWIFYSQSPLLPNPTCLS 93
Query: 40 RLVSQLSYLNT 8
RLVSQLSY NT
Sbjct: 94 RLVSQLSYQNT 104
>gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlisea aurea]
Length = 675
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = -1
Query: 151 SGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLSYLNTTE 2
S SQD+ LL+LLQQRKTEEAW LY Q LPN TCLSRLV+QLS+ T E
Sbjct: 1 SASQDKKLLSLLQQRKTEEAWALYVQSGHLPNSTCLSRLVAQLSFQKTAE 50
>ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 732
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -1
Query: 199 NPSNASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLS 20
NPS+ ++++ N + +DQ LLTLLQQRK EEAWL LPNPTCLSRLVSQLS
Sbjct: 36 NPSDTTITT----NSKTEPRDQKLLTLLQQRKKEEAWLXXTLSTHLPNPTCLSRLVSQLS 91
Query: 19 YLNT 8
Y NT
Sbjct: 92 YHNT 95
>ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 732
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -1
Query: 199 NPSNASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLS 20
NPS+ ++++ N + +DQ LLTLLQQRK EEAWL LPNPTCLSRLVSQLS
Sbjct: 36 NPSDTTITT----NSKTEPRDQKLLTLLQQRKKEEAWLAXTLSTHLPNPTCLSRLVSQLS 91
Query: 19 YLNT 8
Y NT
Sbjct: 92 YHNT 95
>ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/67 (56%), Positives = 44/67 (65%)
Frame = -1
Query: 208 TAKNPSNASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVS 29
T P + AT +N +DQ LL+LL+ RKTEEAWL Y+ LPNPTCLSRLVS
Sbjct: 4 TLLQPPLSPFQRATTTNS-PEPRDQKLLSLLRDRKTEEAWLAYSHSTHLPNPTCLSRLVS 62
Query: 28 QLSYLNT 8
QLSY NT
Sbjct: 63 QLSYQNT 69
>ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
gi|297328472|gb|EFH58891.1| HCF152 [Arabidopsis lyrata
subsp. lyrata]
Length = 772
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = -1
Query: 199 NPSNASLSS--ATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQ 26
N S LSS +PS +S DQ LL LL+ RKT+EAW Y Q LP PTCLSRLVSQ
Sbjct: 56 NSSAGDLSSFLGSPSEAYSTHNDQELLFLLRNRKTDEAWAKYVQSTHLPGPTCLSRLVSQ 115
Query: 25 LSYLNTTE 2
LSY + E
Sbjct: 116 LSYQSKPE 123
>ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thaliana]
gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g09650, chloroplastic; AltName: Full=Protein HIGH
CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical
protein [Arabidopsis thaliana]
gi|332641272|gb|AEE74793.1| RNA binding protein HCF152
[Arabidopsis thaliana]
Length = 778
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = -1
Query: 199 NPSNASLSS--ATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQ 26
N S LSS +PS +S DQ LL LL+ RKT+EAW Y Q LP PTCLSRLVSQ
Sbjct: 63 NSSAEDLSSFLGSPSEAYSTHNDQELLFLLRNRKTDEAWAKYVQSTHLPGPTCLSRLVSQ 122
Query: 25 LSYLNTTE 2
LSY + E
Sbjct: 123 LSYQSKPE 130
>dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
Length = 778
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = -1
Query: 199 NPSNASLSS--ATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQ 26
N S LSS +PS +S DQ LL LL+ RKT+EAW Y Q LP PTCLSRLVSQ
Sbjct: 63 NSSAEDLSSFLGSPSEAYSTHNDQELLFLLRNRKTDEAWAKYVQSTHLPGPTCLSRLVSQ 122
Query: 25 LSYLNTTE 2
LSY + E
Sbjct: 123 LSYQSKPE 130
>gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus vulgaris]
Length = 713
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/60 (60%), Positives = 42/60 (70%)
Frame = -1
Query: 187 ASLSSATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQLSYLNT 8
A++S A P +DQ LL+LL++RKTEEAW Y LPNPTCLSRLVSQLSY NT
Sbjct: 17 AAISIAEP-------RDQKLLSLLRERKTEEAWNAYTHSTHLPNPTCLSRLVSQLSYQNT 69
>ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutrema salsugineum]
gi|557108800|gb|ESQ49107.1| hypothetical protein
EUTSA_v10020113mg [Eutrema salsugineum]
Length = 777
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/63 (57%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = -1
Query: 199 NPSNASLSS--ATPSNKFSGSQDQVLLTLLQQRKTEEAWLLYAQCAQLPNPTCLSRLVSQ 26
N S LSS + S +S DQ LL+LL+ RKT+EAW Y Q LP PTCLSRLVSQ
Sbjct: 62 NSSAGDLSSFLGSSSEPYSTHNDQELLSLLRNRKTDEAWAKYVQSTHLPGPTCLSRLVSQ 121
Query: 25 LSY 17
LSY
Sbjct: 122 LSY 124