BLASTX nr result
ID: Rehmannia26_contig00022499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00022499
(426 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-... 112 7e-34
emb|CBI31781.3| unnamed protein product [Vitis vinifera] 112 7e-34
emb|CBI29513.3| unnamed protein product [Vitis vinifera] 112 9e-34
emb|CBI37346.3| unnamed protein product [Vitis vinifera] 112 6e-33
ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-... 116 3e-32
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-... 111 2e-31
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-... 105 8e-31
ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Popu... 108 1e-30
ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-... 105 1e-30
ref|XP_006421901.1| hypothetical protein CICLE_v10004302mg [Citr... 105 1e-30
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-... 108 3e-30
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-... 111 5e-30
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe... 107 2e-29
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-... 108 2e-29
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-... 108 3e-29
ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-... 108 3e-29
ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3-... 108 3e-29
ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3-... 108 3e-29
ref|XP_006606108.1| PREDICTED: DNA mismatch repair protein MSH3-... 108 3e-29
gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theob... 100 6e-28
>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 112 bits (281), Expect(2) = 7e-34
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 7/85 (8%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMES-------GVDVRIGAVAVEISTGDVVYGE 160
AE++G GEEECGS +NYL CVVEK + S G DVRIG VAVE+STGDVV+GE
Sbjct: 226 AEEVGGGEEECGSYNNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGE 285
Query: 161 FDDNFMRAGLEAMILHLSPAELLLG 235
F+DNFMRAGLEA+IL +SPAELLLG
Sbjct: 286 FNDNFMRAGLEAVILSMSPAELLLG 310
Score = 57.0 bits (136), Expect(2) = 7e-34
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQ 393
GPASNVRVE S+DC D ALAEV+SLYE+L+E+ A+HQ
Sbjct: 326 GPASNVRVERTSRDCFSDGGALAEVMSLYENLSENSRADHQ 366
>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
Length = 903
Score = 112 bits (281), Expect(2) = 7e-34
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 7/85 (8%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMES-------GVDVRIGAVAVEISTGDVVYGE 160
AE++G GEEECGS +NYL CVVEK + S G DVRIG VAVE+STGDVV+GE
Sbjct: 94 AEEVGGGEEECGSYNNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGE 153
Query: 161 FDDNFMRAGLEAMILHLSPAELLLG 235
F+DNFMRAGLEA+IL +SPAELLLG
Sbjct: 154 FNDNFMRAGLEAVILSMSPAELLLG 178
Score = 57.0 bits (136), Expect(2) = 7e-34
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQ 393
GPASNVRVE S+DC D ALAEV+SLYE+L+E+ A+HQ
Sbjct: 194 GPASNVRVERTSRDCFSDGGALAEVMSLYENLSENSRADHQ 234
>emb|CBI29513.3| unnamed protein product [Vitis vinifera]
Length = 470
Score = 112 bits (281), Expect(2) = 9e-34
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 7/85 (8%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMES-------GVDVRIGAVAVEISTGDVVYGE 160
AED+G GEEECGS +NYL CVVEK + S G DVRIG VAV++STGDVV+GE
Sbjct: 228 AEDVGGGEEECGSYNNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVKVSTGDVVHGE 287
Query: 161 FDDNFMRAGLEAMILHLSPAELLLG 235
F+DNFMRAGLEA+IL +SPAELLLG
Sbjct: 288 FNDNFMRAGLEAVILSMSPAELLLG 312
Score = 56.6 bits (135), Expect(2) = 9e-34
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQ 393
GPASNVRVE S+DC D ALAEV+SLYE+L+E A+HQ
Sbjct: 328 GPASNVRVERTSRDCFSDGGALAEVMSLYENLSEDSRADHQ 368
>emb|CBI37346.3| unnamed protein product [Vitis vinifera]
Length = 490
Score = 112 bits (281), Expect(2) = 6e-33
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 7/85 (8%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMES-------GVDVRIGAVAVEISTGDVVYGE 160
AED+G GEEECGS +NYL CVVEK + S G DVRIG VAVE+STGDVV+G+
Sbjct: 226 AEDVGGGEEECGSYNNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGK 285
Query: 161 FDDNFMRAGLEAMILHLSPAELLLG 235
F+DNFMRAGLEA+IL +SPAELLLG
Sbjct: 286 FNDNFMRAGLEAVILSMSPAELLLG 310
Score = 53.9 bits (128), Expect(2) = 6e-33
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQ 393
GPASNVR+E S+DC D ALAEV+SLYE+L+E +HQ
Sbjct: 326 GPASNVRLERTSRDCFSDGGALAEVMSLYENLSEDSRVDHQ 366
>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
tuberosum]
Length = 1117
Score = 116 bits (291), Expect(2) = 3e-32
Identities = 55/79 (69%), Positives = 66/79 (83%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMESGVDVRIGAVAVEISTGDVVYGEFDDNFMR 181
AED+G G+E CGS +NYL CVVEK + G+DV++G V VE+STGDVVYGEF+DNFMR
Sbjct: 235 AEDVGGGDEGCGSCNNYLVCVVEKGIDLEGCGIDVKLGVVGVEVSTGDVVYGEFNDNFMR 294
Query: 182 AGLEAMILHLSPAELLLGR 238
AGLEAMIL+L PAELL+GR
Sbjct: 295 AGLEAMILNLLPAELLVGR 313
Score = 47.8 bits (112), Expect(2) = 3e-32
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQQK 399
GPASNVRVE S D D ALAEV+SLYE + E+ + + Q+K
Sbjct: 328 GPASNVRVEDVSSDRFSDGGALAEVMSLYEGMQETYLLDVQEK 370
>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 1094
Score = 111 bits (278), Expect(2) = 2e-31
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 6/84 (7%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVG------NMESGVDVRIGAVAVEISTGDVVYGEF 163
A+DLG EE C SNYLFC+VE ++ +E+GVDV+IG VA+EISTGDV+YGE+
Sbjct: 228 AQDLGGAEEGCAGESNYLFCLVENSMSVQNVDCRIENGVDVKIGMVAMEISTGDVIYGEY 287
Query: 164 DDNFMRAGLEAMILHLSPAELLLG 235
DDNFMR GLEAM+L LSPAELLLG
Sbjct: 288 DDNFMRNGLEAMLLSLSPAELLLG 311
Score = 50.1 bits (118), Expect(2) = 2e-31
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIA--NHQQKVIV 408
GPA NVRVE S DC D ALAEV+SLYE+++++ N+ +KV+V
Sbjct: 327 GPALNVRVERVSGDCFKDGSALAEVMSLYENIDQNNFTEDNNPEKVLV 374
>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
subsp. vesca]
Length = 1106
Score = 105 bits (263), Expect(2) = 8e-31
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKA--VGNMESGVDVRIGAVAVEISTGDVVYGEFDDNF 175
AE +G GEE CG S+YL CVV+++ VGN+ES +VRIG VAVEISTGDVVYGEF D+F
Sbjct: 226 AEGVGGGEEGCGGESSYLSCVVDESGNVGNLES--EVRIGIVAVEISTGDVVYGEFRDDF 283
Query: 176 MRAGLEAMILHLSPAELLLG 235
MR+GLEA +L LSPAELLLG
Sbjct: 284 MRSGLEAFVLSLSPAELLLG 303
Score = 53.5 bits (127), Expect(2) = 8e-31
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQQ 396
GPASNVRVE S+DC D ALAEV+SLYE+++E K+ + +
Sbjct: 319 GPASNVRVERVSRDCFKDGGALAEVMSLYENMDEDKLGDQTE 360
>ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Populus trichocarpa]
gi|550322628|gb|EEF06592.2| hypothetical protein
POPTR_0015s13240g [Populus trichocarpa]
Length = 963
Score = 108 bits (269), Expect(2) = 1e-30
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVG-NMESGV-DVRIGAVAVEISTGDVVYGEFDDNF 175
AE++G EEECG SNYL CVVEK + +E GV DVR+G VAVEISTGDVVYGEF+D F
Sbjct: 77 AENVGGEEEECGGESNYLCCVVEKGLDCGVEGGVFDVRVGVVAVEISTGDVVYGEFNDGF 136
Query: 176 MRAGLEAMILHLSPAELLLG 235
MR+GLEA +L L+PAELLLG
Sbjct: 137 MRSGLEAFVLSLAPAELLLG 156
Score = 50.8 bits (120), Expect(2) = 1e-30
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQQKVIVSDTRGN 426
GP+SNVRVE S+DC D ALA+V+SLYE++ E + ++++++ + +G+
Sbjct: 172 GPSSNVRVERVSRDCFSDGGALADVMSLYENMIEDNLGDNEKQMTDAKEQGS 223
>ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-like [Citrus sinensis]
Length = 1087
Score = 105 bits (263), Expect(2) = 1e-30
Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 7/86 (8%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKA--VGNMESGV-----DVRIGAVAVEISTGDVVYGE 160
AED+G GE+ CG SNYL CVV+ VG + +GV DVR+G VAVEISTGDVVYGE
Sbjct: 206 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 265
Query: 161 FDDNFMRAGLEAMILHLSPAELLLGR 238
F+D F+R+GLEA++L LSPAELLLG+
Sbjct: 266 FNDGFLRSGLEAVLLSLSPAELLLGQ 291
Score = 52.8 bits (125), Expect(2) = 1e-30
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQQKVIVSDTRGN 426
GPASNVRVE AS+DC ALAEV+SLYE++ E ++N++ + + +GN
Sbjct: 306 GPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 357
>ref|XP_006421901.1| hypothetical protein CICLE_v10004302mg [Citrus clementina]
gi|557523774|gb|ESR35141.1| hypothetical protein
CICLE_v10004302mg [Citrus clementina]
Length = 853
Score = 105 bits (263), Expect(2) = 1e-30
Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 7/86 (8%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKA--VGNMESGV-----DVRIGAVAVEISTGDVVYGE 160
AED+G GE+ CG SNYL CVV+ VG + +GV DVR+G VAVEISTGDVVYGE
Sbjct: 206 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 265
Query: 161 FDDNFMRAGLEAMILHLSPAELLLGR 238
F+D F+R+GLEA++L LSPAELLLG+
Sbjct: 266 FNDGFLRSGLEAVLLSLSPAELLLGQ 291
Score = 52.8 bits (125), Expect(2) = 1e-30
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQQKVIVSDTRGN 426
GPASNVRVE AS+DC ALAEV+SLYE++ E ++N++ + + +GN
Sbjct: 306 GPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 357
>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
lycopersicum]
Length = 1117
Score = 108 bits (271), Expect(2) = 3e-30
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMESGVDVRIGAVAVEISTGDVVYGEFDDNFMR 181
+ED+G G+E GS +NYL CVVEK + G DV++G V VE+STGDVVYGEF+DNFMR
Sbjct: 235 SEDVGGGDEGFGSCNNYLVCVVEKVIDLEGCGNDVKLGVVGVEVSTGDVVYGEFNDNFMR 294
Query: 182 AGLEAMILHLSPAELLLGR 238
AGLEAMIL+L PAELL+GR
Sbjct: 295 AGLEAMILNLLPAELLVGR 313
Score = 48.5 bits (114), Expect(2) = 3e-30
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANHQQK 399
GPASNVRVE S D D ALAEV+SLYE + E+ + + Q+K
Sbjct: 328 GPASNVRVEDVSSDRFSDGGALAEVMSLYEGMQETNLLDVQEK 370
>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 966
Score = 111 bits (278), Expect(2) = 5e-30
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 6/84 (7%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVG------NMESGVDVRIGAVAVEISTGDVVYGEF 163
A+DLG EE C SNYLFC+VE ++ +E+GVDV+IG VA+EISTGDV+YGE+
Sbjct: 245 AQDLGGAEEGCAGESNYLFCLVENSMSVQNVDCRIENGVDVKIGMVAMEISTGDVIYGEY 304
Query: 164 DDNFMRAGLEAMILHLSPAELLLG 235
DDNFMR GLEAM+L LSPAELLLG
Sbjct: 305 DDNFMRNGLEAMLLSLSPAELLLG 328
Score = 45.1 bits (105), Expect(2) = 5e-30
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIA--NHQQKVIV 408
GPA NVRVE S D D ALAEV+SLYE+++++ N +KV+V
Sbjct: 344 GPALNVRVERVSGDFFKDGSALAEVMSLYENIDQNNFTEDNSPEKVLV 391
>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
Length = 1096
Score = 107 bits (268), Expect(2) = 2e-29
Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 6/84 (7%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAV------GNMESGVDVRIGAVAVEISTGDVVYGEF 163
AED+G EE CG SNYL CVV+K+V G ++SG++V+IG VAVE STGDVVYGEF
Sbjct: 238 AEDVGGKEEGCGGDSNYLACVVDKSVALENVDGGVDSGIEVKIGIVAVEASTGDVVYGEF 297
Query: 164 DDNFMRAGLEAMILHLSPAELLLG 235
+DN MR+GLEA +L LSPAELL+G
Sbjct: 298 NDNCMRSGLEAAVLSLSPAELLIG 321
Score = 47.4 bits (111), Expect(2) = 2e-29
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANH 390
GPASNVRVEH S+D ++ A AEV+SLYE+++ + +H
Sbjct: 337 GPASNVRVEHVSRDHFNEGGAFAEVMSLYENMDGDDLTDH 376
>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
arietinum]
Length = 1076
Score = 108 bits (270), Expect(2) = 2e-29
Identities = 54/85 (63%), Positives = 67/85 (78%), Gaps = 6/85 (7%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAV------GNMESGVDVRIGAVAVEISTGDVVYGEF 163
A+DLG E+ECG+ SNYL CVVEK++ +E G DVRIG V VEISTGDVVYGEF
Sbjct: 215 AQDLGGEEDECGTRSNYLLCVVEKSILGEKSSCGVEGGFDVRIGIVGVEISTGDVVYGEF 274
Query: 164 DDNFMRAGLEAMILHLSPAELLLGR 238
+DNF+R+ LEA+++ LSPAELLLG+
Sbjct: 275 NDNFLRSELEAVVVSLSPAELLLGK 299
Score = 46.6 bits (109), Expect(2) = 2e-29
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESL 366
GP+SN RVEHAS+DC D A AEV++LYE++
Sbjct: 314 GPSSNARVEHASRDCFTDGGAFAEVMTLYENM 345
>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1
[Glycine max]
Length = 1070
Score = 108 bits (269), Expect(2) = 3e-29
Identities = 53/78 (67%), Positives = 63/78 (80%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMESGVDVRIGAVAVEISTGDVVYGEFDDNFMR 181
A DLG E+ CG SNYL CVVEK+V + + GVD RIG VAVEISTGDVV+GEF D F+R
Sbjct: 208 APDLGGAEDGCGGESNYLLCVVEKSVLDEKGGVDARIGIVAVEISTGDVVFGEFCDGFLR 267
Query: 182 AGLEAMILHLSPAELLLG 235
+ LEA++L+LSPAELLLG
Sbjct: 268 SALEAVVLNLSPAELLLG 285
Score = 45.8 bits (107), Expect(2) = 3e-29
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 10/58 (17%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESL----------NESKIANHQQKVIVSD 414
GPASNVRVE S+DC D ALAEV++LYE++ + N QK+I+ +
Sbjct: 301 GPASNVRVERFSRDCFIDGGALAEVMTLYENMHIDSPSDSIQSNDLTENRSQKLIIKE 358
>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2
[Glycine max]
Length = 991
Score = 108 bits (269), Expect(2) = 3e-29
Identities = 53/78 (67%), Positives = 63/78 (80%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMESGVDVRIGAVAVEISTGDVVYGEFDDNFMR 181
A DLG E+ CG SNYL CVVEK+V + + GVD RIG VAVEISTGDVV+GEF D F+R
Sbjct: 208 APDLGGAEDGCGGESNYLLCVVEKSVLDEKGGVDARIGIVAVEISTGDVVFGEFCDGFLR 267
Query: 182 AGLEAMILHLSPAELLLG 235
+ LEA++L+LSPAELLLG
Sbjct: 268 SALEAVVLNLSPAELLLG 285
Score = 45.8 bits (107), Expect(2) = 3e-29
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 10/58 (17%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESL----------NESKIANHQQKVIVSD 414
GPASNVRVE S+DC D ALAEV++LYE++ + N QK+I+ +
Sbjct: 301 GPASNVRVERFSRDCFIDGGALAEVMTLYENMHIDSPSDSIQSNDLTENRSQKLIIKE 358
>ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X3
[Glycine max]
Length = 968
Score = 108 bits (269), Expect(2) = 3e-29
Identities = 53/78 (67%), Positives = 63/78 (80%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMESGVDVRIGAVAVEISTGDVVYGEFDDNFMR 181
A DLG E+ CG SNYL CVVEK+V + + GVD RIG VAVEISTGDVV+GEF D F+R
Sbjct: 208 APDLGGAEDGCGGESNYLLCVVEKSVLDEKGGVDARIGIVAVEISTGDVVFGEFCDGFLR 267
Query: 182 AGLEAMILHLSPAELLLG 235
+ LEA++L+LSPAELLLG
Sbjct: 268 SALEAVVLNLSPAELLLG 285
Score = 45.8 bits (107), Expect(2) = 3e-29
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 10/58 (17%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESL----------NESKIANHQQKVIVSD 414
GPASNVRVE S+DC D ALAEV++LYE++ + N QK+I+ +
Sbjct: 301 GPASNVRVERFSRDCFIDGGALAEVMTLYENMHIDSPSDSIQSNDLTENRSQKLIIKE 358
>ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X4
[Glycine max]
Length = 967
Score = 108 bits (269), Expect(2) = 3e-29
Identities = 53/78 (67%), Positives = 63/78 (80%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMESGVDVRIGAVAVEISTGDVVYGEFDDNFMR 181
A DLG E+ CG SNYL CVVEK+V + + GVD RIG VAVEISTGDVV+GEF D F+R
Sbjct: 208 APDLGGAEDGCGGESNYLLCVVEKSVLDEKGGVDARIGIVAVEISTGDVVFGEFCDGFLR 267
Query: 182 AGLEAMILHLSPAELLLG 235
+ LEA++L+LSPAELLLG
Sbjct: 268 SALEAVVLNLSPAELLLG 285
Score = 45.8 bits (107), Expect(2) = 3e-29
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 10/58 (17%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESL----------NESKIANHQQKVIVSD 414
GPASNVRVE S+DC D ALAEV++LYE++ + N QK+I+ +
Sbjct: 301 GPASNVRVERFSRDCFIDGGALAEVMTLYENMHIDSPSDSIQSNDLTENRSQKLIIKE 358
>ref|XP_006606108.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X5
[Glycine max]
Length = 835
Score = 108 bits (269), Expect(2) = 3e-29
Identities = 53/78 (67%), Positives = 63/78 (80%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAVGNMESGVDVRIGAVAVEISTGDVVYGEFDDNFMR 181
A DLG E+ CG SNYL CVVEK+V + + GVD RIG VAVEISTGDVV+GEF D F+R
Sbjct: 208 APDLGGAEDGCGGESNYLLCVVEKSVLDEKGGVDARIGIVAVEISTGDVVFGEFCDGFLR 267
Query: 182 AGLEAMILHLSPAELLLG 235
+ LEA++L+LSPAELLLG
Sbjct: 268 SALEAVVLNLSPAELLLG 285
Score = 45.8 bits (107), Expect(2) = 3e-29
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 10/58 (17%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESL----------NESKIANHQQKVIVSD 414
GPASNVRVE S+DC D ALAEV++LYE++ + N QK+I+ +
Sbjct: 301 GPASNVRVERFSRDCFIDGGALAEVMTLYENMHIDSPSDSIQSNDLTENRSQKLIIKE 358
>gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
Length = 1115
Score = 100 bits (249), Expect(2) = 6e-28
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 5/83 (6%)
Frame = +2
Query: 2 AEDLGAGEEECGSSSNYLFCVVEKAV---GNMESG--VDVRIGAVAVEISTGDVVYGEFD 166
AED+G EE CG SNYL CVVEK + G++ VDVR+G V VEISTGDVVYGEFD
Sbjct: 234 AEDVGGKEEGCGGESNYLVCVVEKGLEFSGSVSGSGAVDVRVGIVGVEISTGDVVYGEFD 293
Query: 167 DNFMRAGLEAMILHLSPAELLLG 235
D MR+GLEA++ L+PAELL+G
Sbjct: 294 DGVMRSGLEAVVFSLAPAELLVG 316
Score = 49.3 bits (116), Expect(2) = 6e-28
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +1
Query: 271 GPASNVRVEHASQDCLHDRDALAEVVSLYESLNESKIANH 390
GPASNVR+EHAS DC ALAEV+S+YE + E +A++
Sbjct: 332 GPASNVRLEHASCDCFKGGGALAEVMSVYEKMVEDNLASN 371