BLASTX nr result

ID: Rehmannia26_contig00022468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00022468
         (431 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana ta...    96   4e-18
ref|XP_006339950.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    90   4e-16
ref|XP_004248833.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    89   5e-16
ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    84   2e-14
gb|EMJ19553.1| hypothetical protein PRUPE_ppa011036mg [Prunus pe...    79   5e-13
ref|XP_002876533.1| zinc finger family protein [Arabidopsis lyra...    70   4e-10
ref|XP_006291543.1| hypothetical protein CARUB_v10017698mg [Caps...    67   3e-09
ref|NP_191567.1| RING/U-box superfamily protein [Arabidopsis tha...    65   9e-09
ref|XP_006402626.1| hypothetical protein EUTSA_v10006114mg [Eutr...    64   3e-08
ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cuc...    61   2e-07
ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219...    60   2e-07
ref|XP_004488573.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   4e-07

>gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana tabacum]
          Length = 302

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/94 (51%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
 Frame = -1

Query: 254 YHPAYWCHSCDMSIGLPPSPTPNALLCPHCHRDSLEQME-MEESIAP-----PPRNP--- 102
           +H  +WCH CDMS+ L   P+ +   CPHCH D LEQM+    ++ P     P  NP   
Sbjct: 12  HHHTFWCHECDMSVFLLHLPSTDPPRCPHCHSDFLEQMDSFTPTLLPQFPNQPDSNPNLE 71

Query: 101 --LSVDHTSAATFTPSDDNFLLTSPYLHRLIHHL 6
             +S D  +A  FTPSDDNFLL SPYLHRLIHHL
Sbjct: 72  DLISTDLNTATNFTPSDDNFLLDSPYLHRLIHHL 105


>ref|XP_006339950.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
           tuberosum]
          Length = 291

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 47/85 (55%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
 Frame = -1

Query: 251 HPAYWCHSCDMSIGLPPSPTPNALLCPHCHRDSLEQME-MEESIAPP-PRNPLSV-DHTS 81
           H  +WCH CDMS+ L   P PN   CPHCH D LE M+ +  +I P  P +P    D  +
Sbjct: 12  HHTFWCHECDMSVFLL-HPPPNNPRCPHCHSDFLEHMDSITPTILPQFPNHPNPTSDIET 70

Query: 80  AATFTPSDDNFLLTSPYLHRLIHHL 6
             TFTPSDDNFLL SPYLHRLI HL
Sbjct: 71  PTTFTPSDDNFLLNSPYLHRLIRHL 95


>ref|XP_004248833.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
           lycopersicum]
          Length = 291

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/85 (55%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
 Frame = -1

Query: 251 HPAYWCHSCDMSIGLPPSPTPNALLCPHCHRDSLEQME-MEESIAPP-PRNPLSV-DHTS 81
           H  +WCH CDMS+ L   P PN   CPHCH D LE M+    +I P  P +P    D  +
Sbjct: 12  HHTFWCHECDMSVFLL-HPPPNNPRCPHCHSDFLEHMDSFTPTILPQFPNHPNPTSDIET 70

Query: 80  AATFTPSDDNFLLTSPYLHRLIHHL 6
             TFTPSDDNFLL SPYLHRLI HL
Sbjct: 71  PTTFTPSDDNFLLNSPYLHRLIRHL 95


>ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 312

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -1

Query: 242 YWCHSCDMSIGLPPSPTPN-ALLCPHCHRDSLEQMEMEESIAPPPRNPLSVDHTSAATFT 66
           YWCH CDMS+ L PS + +  LLCPHCH D LE+M+       P  NP    + +A  F+
Sbjct: 23  YWCHECDMSVTLSPSSSSSPTLLCPHCHSDFLEEMDSPN----PNPNP----NPTAPNFS 74

Query: 65  PSDDNFLLTSPYLHRLIHHL 6
              +NFLL SPYLHRLIHHL
Sbjct: 75  FHSENFLLDSPYLHRLIHHL 94


>gb|EMJ19553.1| hypothetical protein PRUPE_ppa011036mg [Prunus persica]
          Length = 226

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
 Frame = -1

Query: 251 HPAYWCHSCDMSIGLPPSPTPNALLCPHCHRDSLEQMEMEESIAPPPRNPLSVDHTSAAT 72
           H  +WCH CDMS+ L P      LLCPHC  D LE M+   S              S+++
Sbjct: 4   HQTFWCHECDMSVSLVPCSAQETLLCPHCFSDLLELMDSSSS--------------SSSS 49

Query: 71  FTP----SDDNFLLTSPYLHRLIHHLA 3
           F+     S DNFLL SP+LHRLIHHL+
Sbjct: 50  FSDHQHNSQDNFLLNSPFLHRLIHHLS 76


>ref|XP_002876533.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322371|gb|EFH52792.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 302

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/95 (42%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
 Frame = -1

Query: 242 YWCHSCDMSIGLPPSPTPNALLCPHCHRDSLEQMEMEESIA------------PPPRNPL 99
           YWCH CDMS+ L  S   + LLCP C  D LE+M+ + S +                N  
Sbjct: 20  YWCHECDMSLSLLSSSDSSPLLCPQCRLDFLERMDHDSSSSNLFDVTIGDFEEDDGDNDD 79

Query: 98  SVDHTSAATFTP---SDDNFLLTSPYLHRLIHHLA 3
             D        P   SDDNFLL SPYLHRL+ HLA
Sbjct: 80  EDDEEDWCFVDPAVNSDDNFLLDSPYLHRLLRHLA 114


>ref|XP_006291543.1| hypothetical protein CARUB_v10017698mg [Capsella rubella]
           gi|482560250|gb|EOA24441.1| hypothetical protein
           CARUB_v10017698mg [Capsella rubella]
          Length = 308

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 42/101 (41%), Positives = 47/101 (46%), Gaps = 21/101 (20%)
 Frame = -1

Query: 242 YWCHSCDMSIGLPPS----PTPNALLCPHCHRDSLEQMEMEESIA--------------P 117
           YWCH CDMS+ L  S    P  + LLCP C  D LE+M+ E S                 
Sbjct: 20  YWCHECDMSLSLLSSSDSDPDSSPLLCPQCDLDFLERMDHESSSNLFDVTIGDFEDGDDE 79

Query: 116 PPRNPLSVDHTSAATFTP---SDDNFLLTSPYLHRLIHHLA 3
              N    D        P   SDDNFLL SPYLHRL+ HLA
Sbjct: 80  DADNDDDEDEEDWCFVDPTVNSDDNFLLDSPYLHRLLRHLA 120


>ref|NP_191567.1| RING/U-box superfamily protein [Arabidopsis thaliana]
           gi|7076761|emb|CAB75923.1| putative protein [Arabidopsis
           thaliana] gi|56121904|gb|AAV74233.1| At3g60080
           [Arabidopsis thaliana] gi|58531334|gb|AAW78589.1|
           At3g60080 [Arabidopsis thaliana]
           gi|110738535|dbj|BAF01193.1| hypothetical protein
           [Arabidopsis thaliana] gi|332646488|gb|AEE80009.1|
           RING/U-box superfamily protein [Arabidopsis thaliana]
          Length = 306

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
 Frame = -1

Query: 242 YWCHSCDMSIGLPPSPTPNA----LLCPHCHRDSLEQMEMEESIA------------PPP 111
           YWCH CDMS+ L  S   ++    LLCP C  D LE+M+ + S +               
Sbjct: 20  YWCHECDMSLSLLSSSDSDSDSSPLLCPQCRVDFLERMDHDSSSSNLFDVTIGDFEEQDG 79

Query: 110 RNPLSVDHTSAATFTP---SDDNFLLTSPYLHRLIHHLA 3
            N    D        P   SDDNFLL SPYLHRL+ HLA
Sbjct: 80  ENDDEDDEEDWCFVDPAVNSDDNFLLDSPYLHRLLRHLA 118


>ref|XP_006402626.1| hypothetical protein EUTSA_v10006114mg [Eutrema salsugineum]
           gi|557103725|gb|ESQ44079.1| hypothetical protein
           EUTSA_v10006114mg [Eutrema salsugineum]
          Length = 308

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/98 (40%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
 Frame = -1

Query: 242 YWCHSCDMSIGL--PPSPTPNALLCPHCHRDSLEQMEME-------------ESIAPPPR 108
           YWCH CDMS+ L    S   + LLCP C  D LE M+ E             E       
Sbjct: 23  YWCHECDMSLSLLSSSSSVSSPLLCPQCRIDFLESMDDESPSTLFDVTIGDFEEDEDGEH 82

Query: 107 NPLSVDHTSAATFTP---SDDNFLLTSPYLHRLIHHLA 3
           +    D        P   SDDNFLL SPYLHRL+ HLA
Sbjct: 83  DDDDDDEEDWCFVDPTVNSDDNFLLDSPYLHRLLRHLA 120


>ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cucumis sativus]
          Length = 333

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 22/102 (21%)
 Frame = -1

Query: 242 YWCHSCDMSIGL----------PPSPTPNALLCPHCHRDSLEQMEM-----EESIAPPPR 108
           YWCH CDMS+ L            S + ++L+CPHC  D +E M+        SI+  P 
Sbjct: 17  YWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFTIPTSSSSISDNPN 76

Query: 107 N---PLSVDHTSAATFTP----SDDNFLLTSPYLHRLIHHLA 3
           +   P   D +S     P    SDDN+LL SP   RL  HLA
Sbjct: 77  SSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLA 118


>ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219937 [Cucumis sativus]
          Length = 334

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 23/103 (22%)
 Frame = -1

Query: 242 YWCHSCDMSIGL-----------PPSPTPNALLCPHCHRDSLEQMEM-----EESIAPPP 111
           YWCH CDMS+ L             S + ++L+CPHC  D +E M+        SI+  P
Sbjct: 17  YWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFTIPTSSSSISDNP 76

Query: 110 RN---PLSVDHTSAATFTP----SDDNFLLTSPYLHRLIHHLA 3
            +   P   D +S     P    SDDN+LL SP   RL  HLA
Sbjct: 77  NSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLA 119


>ref|XP_004488573.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum]
          Length = 237

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 23/35 (65%), Positives = 25/35 (71%)
 Frame = -1

Query: 242 YWCHSCDMSIGLPPSPTPNALLCPHCHRDSLEQME 138
           YWCH CDMS+ L  SPTPN LLCP CH   LE M+
Sbjct: 16  YWCHECDMSVSLTSSPTPNPLLCPQCHTHFLELMD 50


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