BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00022219
         (739 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS59477.1| hypothetical protein M569_15330, partial [Genlise...   275   9e-72
ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [...   275   9e-72
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   275   1e-71
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              275   1e-71
ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [...   274   2e-71
ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [...   272   1e-70
ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like i...   271   2e-70
ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like i...   271   2e-70
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The...   258   1e-66
ref|XP_002532622.1| Far upstream element-binding protein, putati...   257   3e-66
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The...   254   3e-65
ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Popu...   251   2e-64
ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like i...   249   9e-64
gb|ABQ23585.1| putative KH-domain containing protein [Medicago t...   248   1e-63
gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus...   247   3e-63
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]     246   6e-63
gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis]           245   1e-62
ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Popu...   243   6e-62
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i...   241   2e-61
ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like i...   240   3e-61

>gb|EPS59477.1| hypothetical protein M569_15330, partial [Genlisea aurea]
          Length = 214

 Score =  275 bits (704), Expect = 9e-72
 Identities = 148/214 (69%), Positives = 166/214 (77%), Gaps = 5/214 (2%)
 Frame = +2

Query: 26  LDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKISPQDIYYPG 205
           L +FY ED G+ DP SKIRL+ PN              RSLIEDSRADIKISPQD Y+PG
Sbjct: 1   LIQFYAEDEGQGDPVSKIRLVAPNSCCGGIIGKGGAIIRSLIEDSRADIKISPQDFYFPG 60

Query: 206 LHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYN--GMNYIPNGVG 379
           LHDRLVTV G L EQ+RAIELILLKLV D YYQQS  APFPYAALMYN  G++Y PNG G
Sbjct: 61  LHDRLVTVTGILGEQLRAIELILLKLVNDSYYQQSVLAPFPYAALMYNGGGVHYGPNGFG 120

Query: 380 VKYQNNRSPNKDD---RSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGARIKISDRGDF 550
            KY +NR  NK      +SSV+IG+ DE++GL+VGRGGRNI+EISQLSGARIKISDRGDF
Sbjct: 121 PKYPSNRPHNKASILRLTSSVSIGVPDENIGLIVGRGGRNILEISQLSGARIKISDRGDF 180

Query: 551 MSGTSNRKVTITGSQRAIGAAESIILQKVASVAE 652
           + GTSNRKVTI GSQRAI AAES+I QK+ASV E
Sbjct: 181 IPGTSNRKVTIIGSQRAIRAAESMISQKIASVGE 214


>ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum lycopersicum]
          Length = 328

 Score =  275 bits (704), Expect = 9e-72
 Identities = 149/225 (66%), Positives = 172/225 (76%), Gaps = 7/225 (3%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           VDLIL KL+DEFY EDGG+ DP SK RL+VPN              +S IEDSRA IKIS
Sbjct: 104 VDLILGKLMDEFYAEDGGDVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKIS 163

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  +PGLHDR+VTV GTL EQMRAIELIL KL  DPYY QS +APF YAA +Y GMNY
Sbjct: 164 PQDYNFPGLHDRIVTVTGTLEEQMRAIELILFKLADDPYYMQSMNAPFQYAA-VYVGMNY 222

Query: 362 ---IPNGVGVKYQNNRSPNK----DDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGA 520
               PN VG +Y NNR  NK    + R +S+TIG+ADEHVGLV+GR GR+I+EISQLSGA
Sbjct: 223 GYGPPNRVGGRYPNNRQQNKVAPLEVRDNSMTIGVADEHVGLVLGRNGRSIIEISQLSGA 282

Query: 521 RIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           RIKISDRGDF+SGTS+RKVTITGSQRAI  AES+I +KVA+++ R
Sbjct: 283 RIKISDRGDFLSGTSDRKVTITGSQRAIRTAESMISRKVATISVR 327


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  275 bits (702), Expect = 1e-71
 Identities = 147/218 (67%), Positives = 172/218 (78%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           ++LIL+KLL E + EDG E DP SK+RLIVPN              +S IEDS+A IKIS
Sbjct: 97  MELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKIS 156

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  Y GL DRLVT++G+L EQMRAI+LIL KL +DP+Y Q  +APF YAA  YN MNY
Sbjct: 157 PQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAA-YNSMNY 215

Query: 362 IPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGARIKISDR 541
            PNG G K+QNN    K+DRS+SVTIG+ADEH+GLVVGRGGRNIM+ISQ SGARIKISDR
Sbjct: 216 GPNGAGGKFQNN----KEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDR 271

Query: 542 GDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GDFMSGT++RKVTITGSQRAI AAES+I+QKVAS +ER
Sbjct: 272 GDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 309



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 47/195 (24%), Positives = 77/195 (39%)
 Frame = +2

Query: 77  IRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKISPQDIYYPGLHDRLVTVIGTLVEQMR 256
           IR +V N                    S A I++S    ++PG  DR++ + G   E ++
Sbjct: 36  IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIK 95

Query: 257 AIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNYIPNGVGVKYQNNRSPNKDDRSSSVT 436
           A+ELIL KL+ + + +    A                                D  S V 
Sbjct: 96  AMELILAKLLSEMHTEDGDEA--------------------------------DPRSKVR 123

Query: 437 IGIADEHVGLVVGRGGRNIMEISQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIGAAE 616
           + + +   G ++G+GG  I    + S A IKIS + +   G ++R VT+ GS      A 
Sbjct: 124 LIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAI 183

Query: 617 SIILQKVASVAERTE 661
            +IL K+      T+
Sbjct: 184 DLILSKLTEDPHYTQ 198


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  275 bits (702), Expect = 1e-71
 Identities = 147/218 (67%), Positives = 172/218 (78%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           ++LIL+KLL E + EDG E DP SK+RLIVPN              +S IEDS+A IKIS
Sbjct: 145 MELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKIS 204

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  Y GL DRLVT++G+L EQMRAI+LIL KL +DP+Y Q  +APF YAA  YN MNY
Sbjct: 205 PQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAA-YNSMNY 263

Query: 362 IPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGARIKISDR 541
            PNG G K+QNN    K+DRS+SVTIG+ADEH+GLVVGRGGRNIM+ISQ SGARIKISDR
Sbjct: 264 GPNGAGGKFQNN----KEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDR 319

Query: 542 GDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GDFMSGT++RKVTITGSQRAI AAES+I+QKVAS +ER
Sbjct: 320 GDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 357



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 47/195 (24%), Positives = 77/195 (39%)
 Frame = +2

Query: 77  IRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKISPQDIYYPGLHDRLVTVIGTLVEQMR 256
           IR +V N                    S A I++S    ++PG  DR++ + G   E ++
Sbjct: 84  IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIK 143

Query: 257 AIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNYIPNGVGVKYQNNRSPNKDDRSSSVT 436
           A+ELIL KL+ + + +    A                                D  S V 
Sbjct: 144 AMELILAKLLSEMHTEDGDEA--------------------------------DPRSKVR 171

Query: 437 IGIADEHVGLVVGRGGRNIMEISQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIGAAE 616
           + + +   G ++G+GG  I    + S A IKIS + +   G ++R VT+ GS      A 
Sbjct: 172 LIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAI 231

Query: 617 SIILQKVASVAERTE 661
            +IL K+      T+
Sbjct: 232 DLILSKLTEDPHYTQ 246


>ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum tuberosum]
          Length = 328

 Score =  274 bits (701), Expect = 2e-71
 Identities = 149/225 (66%), Positives = 172/225 (76%), Gaps = 7/225 (3%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           VDLIL KL+DEFY EDGGE DP SK RL+VPN              +S IEDSRA IKIS
Sbjct: 104 VDLILGKLMDEFYAEDGGEVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKIS 163

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  +PGLHDR+VTV GTL EQMRAIELIL KL +DP+Y QS +APF YAA +Y GMNY
Sbjct: 164 PQDYNFPGLHDRIVTVTGTLEEQMRAIELILFKLAEDPHYMQSMNAPFQYAA-VYVGMNY 222

Query: 362 ---IPNGVGVKYQNNRSPNK----DDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGA 520
               PN VG +Y NNR  NK    +   +S+TIG+ADEHVGLV+GR GR+I+EISQLSGA
Sbjct: 223 GYGPPNRVGGRYPNNRQQNKVAPPEVGDNSMTIGVADEHVGLVLGRNGRSIIEISQLSGA 282

Query: 521 RIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           RIKISDRGDF+SGTS+RKVTITGSQRAI  AES+I QK+A+V+ R
Sbjct: 283 RIKISDRGDFLSGTSDRKVTITGSQRAIRTAESMISQKIATVSVR 327


>ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [Solanum lycopersicum]
          Length = 328

 Score =  272 bits (695), Expect = 1e-70
 Identities = 148/224 (66%), Positives = 174/224 (77%), Gaps = 7/224 (3%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           VDL+L+KLLDE YVEDGG+  P SK+RL+VPN              +S IEDSRA IKI 
Sbjct: 105 VDLVLNKLLDESYVEDGGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKIL 164

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  +PGLHDR+V VIGTL EQMRAIELIL KL +D +Y Q+ +APFPYAA  Y GMNY
Sbjct: 165 PQDENFPGLHDRIVIVIGTLGEQMRAIELILYKLAEDAHYVQNMNAPFPYAAA-YLGMNY 223

Query: 362 -IPNGV-GVKYQNNR-----SPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGA 520
             PNGV G +Y NNR      PN +DR++SVTIG+ADEH+GLV+GR GR++MEISQ+SGA
Sbjct: 224 GPPNGVIGGRYPNNRYQNKMEPNSEDRNNSVTIGVADEHIGLVLGRNGRSVMEISQVSGA 283

Query: 521 RIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAE 652
           RIKISDRGDFMSGTS+RKVTITGSQRAI  AES+I +KVA+V E
Sbjct: 284 RIKISDRGDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTE 327


>ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
           tuberosum]
          Length = 326

 Score =  271 bits (692), Expect = 2e-70
 Identities = 146/223 (65%), Positives = 172/223 (77%), Gaps = 6/223 (2%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           VDLIL+KLLDE YVEDGG+  P SK+RL+VPN              +S IEDSRA IKI 
Sbjct: 105 VDLILNKLLDESYVEDGGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKIL 164

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  +PGLHDR+V VIGTL EQMRAIELIL KL +D +Y Q+ +APFPYAA  Y GMNY
Sbjct: 165 PQDENFPGLHDRIVIVIGTLGEQMRAIELILYKLAEDTHYVQNMNAPFPYAA--YLGMNY 222

Query: 362 -IPNGVGVKYQNNR-----SPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGAR 523
             PNG+G +Y NNR      PN +D ++SVTIG+ADE +GLV+GR GR++MEISQ+SGAR
Sbjct: 223 GPPNGIGGRYPNNRYQNKMEPNSEDGNNSVTIGVADERIGLVLGRNGRSVMEISQVSGAR 282

Query: 524 IKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAE 652
           IKISDRGDFMSGTS+RKVTITGSQRAI  AES+I +KVA+V E
Sbjct: 283 IKISDRGDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTE 325


>ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Solanum
           tuberosum]
          Length = 327

 Score =  271 bits (692), Expect = 2e-70
 Identities = 146/223 (65%), Positives = 172/223 (77%), Gaps = 6/223 (2%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           VDLIL+KLLDE YVEDGG+  P SK+RL+VPN              +S IEDSRA IKI 
Sbjct: 105 VDLILNKLLDESYVEDGGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKIL 164

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  +PGLHDR+V VIGTL EQMRAIELIL KL +D +Y Q+ +APFPYAA  Y GMNY
Sbjct: 165 PQDENFPGLHDRIVIVIGTLGEQMRAIELILYKLAEDTHYVQNMNAPFPYAA-AYLGMNY 223

Query: 362 -IPNGVGVKYQNNR-----SPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGAR 523
             PNG+G +Y NNR      PN +D ++SVTIG+ADE +GLV+GR GR++MEISQ+SGAR
Sbjct: 224 GPPNGIGGRYPNNRYQNKMEPNSEDGNNSVTIGVADERIGLVLGRNGRSVMEISQVSGAR 283

Query: 524 IKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAE 652
           IKISDRGDFMSGTS+RKVTITGSQRAI  AES+I +KVA+V E
Sbjct: 284 IKISDRGDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTE 326


>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
          Length = 314

 Score =  258 bits (659), Expect = 1e-66
 Identities = 137/218 (62%), Positives = 168/218 (77%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           ++LIL+KLL+E  +ED  + +P +K+RLIVPN              +S IEDS+A IKIS
Sbjct: 98  MELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKIS 157

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  + GL+DRLVT+ GTL EQMRAI+LIL KL +DP+Y Q+  APF YAA  YN M+Y
Sbjct: 158 PQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSYAAATYNSMSY 217

Query: 362 IPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGARIKISDR 541
             NG G K+QN    +K+DRS+SVTIG+AD H+GLV+GRGGRNIMEISQLSGARIKISDR
Sbjct: 218 PSNGAGGKFQN----HKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDR 273

Query: 542 GDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GDFMSGT++RKVTITGSQRAI  AES+I+QKVA   +R
Sbjct: 274 GDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATDR 311


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
           gi|223527642|gb|EEF29753.1| Far upstream element-binding
           protein, putative [Ricinus communis]
          Length = 314

 Score =  257 bits (656), Expect = 3e-66
 Identities = 136/218 (62%), Positives = 166/218 (76%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           V+L+L+KLL E + EDG + DP +K+RL+VPN              +S IE+S+A IKIS
Sbjct: 99  VELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKIS 158

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  + GL+DRLVTV GTL EQMRAI+LIL KL  DP+Y Q+  APF YA + YN MNY
Sbjct: 159 PQDNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHYVQTMHAPFSYA-VAYNSMNY 217

Query: 362 IPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGARIKISDR 541
             NG G K+QNN    K+DR++SVTIG+AD H+GLVVGRGGRNIMEISQ+SGARIKISDR
Sbjct: 218 GANGAGGKFQNN----KEDRTNSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDR 273

Query: 542 GDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GDFMSGT++RK+ ITGSQRAI  AE +I+QKVA  +ER
Sbjct: 274 GDFMSGTNDRKIIITGSQRAIRTAEGMIMQKVAYASER 311


>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
           gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
           gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  254 bits (648), Expect = 3e-65
 Identities = 137/218 (62%), Positives = 168/218 (77%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           ++LIL+KLL+E  +ED  + +P +K+RLIVPN              +S IEDS+A IKIS
Sbjct: 98  MELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKIS 157

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  + GL+DRLVT+ GTL EQMRAI+LIL KL +DP+Y Q+  APF YAA  YN M+Y
Sbjct: 158 PQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSYAAT-YNSMSY 216

Query: 362 IPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGARIKISDR 541
             NG G K+QN+    K+DRS+SVTIG+AD H+GLV+GRGGRNIMEISQLSGARIKISDR
Sbjct: 217 PSNGAGGKFQNH----KEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDR 272

Query: 542 GDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GDFMSGT++RKVTITGSQRAI  AES+I+QKVA   +R
Sbjct: 273 GDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATDR 310


>ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
           gi|550330463|gb|ERP56589.1| hypothetical protein
           POPTR_0010s23710g [Populus trichocarpa]
          Length = 313

 Score =  251 bits (640), Expect = 2e-64
 Identities = 134/218 (61%), Positives = 162/218 (74%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           V+LI++KLL E   EDG E +P  ++RL+VPN              +S IE+S A IKIS
Sbjct: 98  VELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKIS 157

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           P D  + GL DRLVTV GTL EQM AI+LIL KL  DP+Y Q+  APF YAA  YN MN+
Sbjct: 158 PLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQTMHAPFSYAAA-YNSMNH 216

Query: 362 IPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGARIKISDR 541
            PNG  VK+Q+N    KDD ++SVTIG+ADEH+GLVVGRGGRNIMEISQ SGAR+KISDR
Sbjct: 217 GPNGAAVKFQHN----KDDITNSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDR 272

Query: 542 GDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GDFMSGT++RK+TITGSQRAI AAE +I+QKV+  +ER
Sbjct: 273 GDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYASER 310


>ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Cicer
           arietinum]
          Length = 315

 Score =  249 bits (635), Expect = 9e-64
 Identities = 131/218 (60%), Positives = 168/218 (77%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           V+LILSKLL E + ED  + +P++K+RLIVPN              RS IEDS+A IKIS
Sbjct: 101 VELILSKLLTELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEDSQAGIKIS 160

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALMYNGMNY 361
           PQD  Y G +DR+V+V GTL EQMRA++LI+ KL +DP+Y QS ++PF Y+A  YN +NY
Sbjct: 161 PQDNSYYGQNDRIVSVTGTLDEQMRAVDLIVSKLAEDPHYSQSMNSPFSYSA--YNSVNY 218

Query: 362 IPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRGGRNIMEISQLSGARIKISDR 541
            PNG   K+QN+    K++RS+S+TIGIADEH+GLVVGRGGRNI +I+Q+SGA+IKISDR
Sbjct: 219 RPNGAAGKFQNS----KEERSNSMTIGIADEHIGLVVGRGGRNIADITQVSGAKIKISDR 274

Query: 542 GDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GD++SGT++RKVTITGSQRAI  AES+I+QKVA   ER
Sbjct: 275 GDYISGTTDRKVTITGSQRAIRTAESMIMQKVAYATER 312


>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
          Length = 334

 Score =  248 bits (633), Expect = 1e-63
 Identities = 135/240 (56%), Positives = 167/240 (69%), Gaps = 20/240 (8%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           V+LILSKLL E + ED  + +P++K+RLIVPN              RS IE+S+A IKIS
Sbjct: 99  VELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKIS 158

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALM------ 343
           PQD  Y G +DR+VTV GTL EQMR I+LI+ KL +DP+Y  S S+PF Y+         
Sbjct: 159 PQDNSYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYSHSMSSPFTYSGAYVSGYQG 218

Query: 344 --------------YNGMNYIPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRG 481
                         YNG+NY PNG G K+QN+    K+DRS+S+TIG+ADEH+GLVVGRG
Sbjct: 219 VPYTYVLPSVAPPAYNGVNYRPNGTGAKFQNS----KEDRSNSMTIGVADEHIGLVVGRG 274

Query: 482 GRNIMEISQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAERTE 661
           GRNI +ISQ SGA+IKISDRGD++SGT++RKVTITGSQRAI  AES+ILQKVA   ER E
Sbjct: 275 GRNISDISQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATERVE 334


>gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus vulgaris]
          Length = 335

 Score =  247 bits (631), Expect = 3e-63
 Identities = 135/238 (56%), Positives = 167/238 (70%), Gaps = 20/238 (8%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           V LILSKLL E + ED  E +P++K+RLIVPN              RS IEDS+A IKIS
Sbjct: 99  VGLILSKLLSELHTEDDNEAEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEDSQAGIKIS 158

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALM------ 343
           PQD  Y G +DRLVT+ GTL EQ+RAIELI+ KL +DP Y QS ++PF Y  +       
Sbjct: 159 PQDNNYYGQNDRLVTLTGTLEEQIRAIELIVSKLAEDPQYSQSMNSPFSYPGVYFSGYQG 218

Query: 344 --------------YNGMNYIPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRG 481
                         YN +NY PNG G K+QN+    K++RS+S+T+G+ADEH+GLVVGRG
Sbjct: 219 VPYTYVLPSVAPPAYNAVNYRPNGAGAKFQNS----KEERSNSMTMGVADEHIGLVVGRG 274

Query: 482 GRNIMEISQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GRNI+EISQ+SGARIKISDRGD++SGT++RKVTITG+QRAI  AES+ILQKVA   ER
Sbjct: 275 GRNIIEISQVSGARIKISDRGDYISGTTDRKVTITGAQRAIRTAESMILQKVAYATER 332


>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
          Length = 334

 Score =  246 bits (628), Expect = 6e-63
 Identities = 136/238 (57%), Positives = 168/238 (70%), Gaps = 20/238 (8%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           ++LIL+KLL+E  +ED  + +P +K+RLIVPN              +S IEDS+A IKIS
Sbjct: 98  MELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKIS 157

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALM------ 343
           PQD  + GL+DRLVT+ GTL EQMRAI+LIL KL +DP+Y Q+  APF YA +       
Sbjct: 158 PQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAMHAPFSYAGIFFSGFHG 217

Query: 344 --------------YNGMNYIPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRG 481
                         YN M+Y  NG G K+QN+    K+DRS+SVTIG+AD H+GLV+GRG
Sbjct: 218 IPYAYVLPSVATATYNSMSYPSNGAGGKFQNH----KEDRSNSVTIGVADGHIGLVLGRG 273

Query: 482 GRNIMEISQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GRNIMEISQLSGARIKISDRGDFMSGT++RKVTITGSQRAI  AES+I+QKVA   +R
Sbjct: 274 GRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATDR 331


>gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis]
          Length = 349

 Score =  245 bits (625), Expect = 1e-62
 Identities = 135/237 (56%), Positives = 164/237 (69%), Gaps = 19/237 (8%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           ++L+L+KLL E   E+  + DP  K+RL+VPN              +S IE+S+A IKIS
Sbjct: 113 MELVLAKLLSELQTEEENDVDPRKKLRLVVPNGSCGGIIGKGGSTIKSFIEESQAGIKIS 172

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPY---------- 331
           PQD  Y G++DRLVT+ GTL EQMRAI+LIL KL +DP+Y QS +APF Y          
Sbjct: 173 PQDNNYLGINDRLVTLTGTLDEQMRAIDLILSKLAEDPHYTQSMNAPFSYPGVFSGIHGT 232

Query: 332 ---------AALMYNGMNYIPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRGG 484
                    A   YN   Y PNG G K+QNN    K+DRS+SVTIG+AD H+G VVGRGG
Sbjct: 233 PYPHVLPSVATASYNQTGYGPNGAGGKFQNN----KEDRSNSVTIGVADGHIGFVVGRGG 288

Query: 485 RNIMEISQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           RNIMEISQ SGARIKISDRGDF+SGT++RKVTITGSQRAI AAES+I+QKVA  +ER
Sbjct: 289 RNIMEISQASGARIKISDRGDFLSGTTDRKVTITGSQRAICAAESMIMQKVAYASER 345


>ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
           gi|222865445|gb|EEF02576.1| hypothetical protein
           POPTR_0010s23710g [Populus trichocarpa]
          Length = 334

 Score =  243 bits (619), Expect = 6e-62
 Identities = 133/238 (55%), Positives = 162/238 (68%), Gaps = 20/238 (8%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           V+LI++KLL E   EDG E +P  ++RL+VPN              +S IE+S A IKIS
Sbjct: 98  VELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKIS 157

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALM------ 343
           P D  + GL DRLVTV GTL EQM AI+LIL KL  DP+Y Q+  APF YA +       
Sbjct: 158 PLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQTMHAPFSYAGVFFSGFDG 217

Query: 344 --------------YNGMNYIPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRG 481
                         YN MN+ PNG  VK+Q+N    KDD ++SVTIG+ADEH+GLVVGRG
Sbjct: 218 IQYACVLPYVATAAYNSMNHGPNGAAVKFQHN----KDDITNSVTIGVADEHIGLVVGRG 273

Query: 482 GRNIMEISQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GRNIMEISQ SGAR+KISDRGDFMSGT++RK+TITGSQRAI AAE +I+QKV+  +ER
Sbjct: 274 GRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYASER 331


>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
          Length = 332

 Score =  241 bits (614), Expect = 2e-61
 Identities = 135/234 (57%), Positives = 166/234 (70%), Gaps = 16/234 (6%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           V+LILSKLL E + ED  + +P++K+RL+VPN              RS IEDS+A IKIS
Sbjct: 99  VELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKIS 158

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPY---------- 331
           PQD  Y G +DRLVT+ G+  EQMRAIELI+ KL +DP+Y QS ++PF Y          
Sbjct: 159 PQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNSPFSYPGYQGVPYTY 218

Query: 332 -----AALMYNGMNYIPNGV-GVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRGGRNI 493
                A   YN +NY PNG  G K QN+    K++RS+S+T+G+ADEH+GLVVGRGGRNI
Sbjct: 219 VLPSVAPPAYNAVNYRPNGAAGGKLQNS----KEERSNSLTMGVADEHIGLVVGRGGRNI 274

Query: 494 MEISQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           MEISQ SGARIKISDRGD++SGT++RKVTITGSQRAI  AES+ILQKVA   ER
Sbjct: 275 MEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAYATER 328


>ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Cicer
           arietinum]
          Length = 337

 Score =  240 bits (613), Expect = 3e-61
 Identities = 130/238 (54%), Positives = 168/238 (70%), Gaps = 20/238 (8%)
 Frame = +2

Query: 2   VDLILSKLLDEFYVEDGGENDPESKIRLIVPNXXXXXXXXXXXXXXRSLIEDSRADIKIS 181
           V+LILSKLL E + ED  + +P++K+RLIVPN              RS IEDS+A IKIS
Sbjct: 101 VELILSKLLTELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEDSQAGIKIS 160

Query: 182 PQDIYYPGLHDRLVTVIGTLVEQMRAIELILLKLVKDPYYQQSSSAPFPYAALM------ 343
           PQD  Y G +DR+V+V GTL EQMRA++LI+ KL +DP+Y QS ++PF Y+ +       
Sbjct: 161 PQDNSYYGQNDRIVSVTGTLDEQMRAVDLIVSKLAEDPHYSQSMNSPFSYSGVYVPGYQG 220

Query: 344 --------------YNGMNYIPNGVGVKYQNNRSPNKDDRSSSVTIGIADEHVGLVVGRG 481
                         YN +NY PNG   K+QN+    K++RS+S+TIGIADEH+GLVVGRG
Sbjct: 221 VPYTYVLPSVAPPAYNSVNYRPNGAAGKFQNS----KEERSNSMTIGIADEHIGLVVGRG 276

Query: 482 GRNIMEISQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIGAAESIILQKVASVAER 655
           GRNI +I+Q+SGA+IKISDRGD++SGT++RKVTITGSQRAI  AES+I+QKVA   ER
Sbjct: 277 GRNIADITQVSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMIMQKVAYATER 334