BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00022199
         (690 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr...   178   1e-42
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi...   175   1e-41
ref|XP_002305605.1| pentatricopeptide repeat-containing family p...   171   3e-40
gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus pe...   168   2e-39
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   167   2e-39
gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein...   165   1e-38
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   164   3e-38
ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi...   159   6e-37
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi...   158   2e-36
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps...   152   1e-34
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr...   148   2e-33
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...   147   4e-33
ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [A...   126   6e-27
ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [A...   125   2e-26
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...   105   1e-20
emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|72689...   105   1e-20
ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp....   102   9e-20
ref|XP_004296042.1| PREDICTED: putative pentatricopeptide repeat...    86   1e-14
ref|XP_004295753.1| PREDICTED: putative pentatricopeptide repeat...    84   4e-14
ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containi...    83   7e-14

>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
           gi|557551699|gb|ESR62328.1| hypothetical protein
           CICLE_v10018367mg [Citrus clementina]
          Length = 578

 Score =  178 bits (452), Expect = 1e-42
 Identities = 83/152 (54%), Positives = 112/152 (73%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RG+I  A ELS +V  QC +G+W+E EEL   ++DQG LLDS  C   ++ YCS R+I K
Sbjct: 422 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDQGLLLDSFCCSSLMEYYCSNRQIDK 481

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           AI LH K+E LKG+LD A Y + L  LFK+ R+EEA+++FDYMK  K ++S SF +++  
Sbjct: 482 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVQIFDYMKELKVVSSSSFVIVVSR 541

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           LCH KELRKAMK+HDEML++G KPD+ TYK++
Sbjct: 542 LCHLKELRKAMKIHDEMLKMGHKPDEATYKQV 573


>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Citrus sinensis]
          Length = 538

 Score =  175 bits (444), Expect = 1e-41
 Identities = 82/152 (53%), Positives = 111/152 (73%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RG+I  A ELS +V  QC +G+W+E EEL   ++D+G LLDS  C   ++ YCS R+I K
Sbjct: 382 RGYIPCAMELSRFVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDK 441

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           AI LH K+E LKG+LD A Y + L  LFK+ R+EEA+++FDYMK  K ++S SF +++  
Sbjct: 442 AIALHIKIEKLKGSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSR 501

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           LCH KELRKAMK HDEML++G KPD+ TYK++
Sbjct: 502 LCHLKELRKAMKNHDEMLKMGHKPDEATYKQV 533


>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848569|gb|EEE86116.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 564

 Score =  171 bits (432), Expect = 3e-40
 Identities = 83/152 (54%), Positives = 108/152 (71%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RGF      LS ++     + RWRE E+L DL++++G L DS  C   V+ YCSRR+I K
Sbjct: 407 RGFRPGTVGLSKFILLLSRKRRWREVEDLLDLVLEKGLLPDSLCCCSLVEHYCSRRQIDK 466

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           A+ LH+K+E L+ +LD A Y+I L  L K  RIEE ++VFDYMK  K +NSESF++ IRG
Sbjct: 467 AVALHNKMEKLQASLDVATYNILLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRG 526

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           LC  KE+RKAMKLHDEML++GLKPD+  YKRL
Sbjct: 527 LCRAKEMRKAMKLHDEMLDMGLKPDKAAYKRL 558


>gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
          Length = 584

 Score =  168 bits (425), Expect = 2e-39
 Identities = 82/152 (53%), Positives = 108/152 (71%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RG    A ELS +++  C  GRWREAE L ++++D+G L D   C   V RYCS R+I  
Sbjct: 412 RGCSPSASELSCFISFLCRRGRWREAEYLLNVVLDKGLLPDLICCSPLVGRYCSGRQIDS 471

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           AI LH+K+E L G+LD   Y++ L+ LF  +RIEEA++VFDYM+    ++S SF++MIRG
Sbjct: 472 AIALHNKMEKLNGSLDVTTYNVLLSGLFAARRIEEAMRVFDYMRRHNLMSSASFTIMIRG 531

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           LC  KELRKAMK+HDEML++ LKPD  TYKRL
Sbjct: 532 LCGVKELRKAMKIHDEMLKMRLKPDAATYKRL 563


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  167 bits (424), Expect = 2e-39
 Identities = 83/152 (54%), Positives = 106/152 (69%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RGF      LS Y+   C + RW+EAEEL  +++++G L D+ S    VK YCS ++  K
Sbjct: 436 RGFSPCTSSLSKYITLLCKKRRWKEAEELLYMVLEKGLLPDTLSFCSLVKHYCSSKQTDK 495

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           A+ LH+ LE L+ +LD   Y++ L  L KE R+EE+IKVFDYMK  K  NS SF+V+IRG
Sbjct: 496 ALALHNTLEKLQASLDITAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANSASFTVIIRG 555

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           LC  KELRKAMKLHDEML +GLKPD+ TYKRL
Sbjct: 556 LCRAKELRKAMKLHDEMLNMGLKPDKPTYKRL 587


>gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 578

 Score =  165 bits (417), Expect = 1e-38
 Identities = 73/146 (50%), Positives = 107/146 (73%)
 Frame = +3

Query: 21  AKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHD 200
           A +LS Y++ QC++  WR+AEEL DL++++G L DS  C   ++ YC  R++ K + LHD
Sbjct: 428 ASKLSKYISSQCSQMNWRKAEELLDLMLEKGLLPDSFGCCLLIQYYCFNRQVDKIVALHD 487

Query: 201 KLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKE 380
           K+E +KG LD   Y++ L  L+ E++ EEA++V+DYM     ++S SF++MIR LCH KE
Sbjct: 488 KMEKVKGCLDVTTYNMILDVLWGERKAEEAVRVYDYMTGLNLVDSASFTIMIRELCHMKE 547

Query: 381 LRKAMKLHDEMLELGLKPDQRTYKRL 458
           ++KAMK+HDEML +GLKPD+ TYKRL
Sbjct: 548 MKKAMKIHDEMLNMGLKPDKGTYKRL 573


>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score =  164 bits (414), Expect = 3e-38
 Identities = 75/152 (49%), Positives = 108/152 (71%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           +GF     +LS ++   C  GRW EA++L ++ +++G L DS  C   V+ YC  R+I  
Sbjct: 413 KGFSPCGSKLSKFITSLCKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRSRQIDS 472

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           +I LH+K++ +KG+LD A Y++ L  LF EKRIE+A+ VFD M++   L+S SF++M+ G
Sbjct: 473 SIALHEKIKKVKGSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSG 532

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           LC E+ELRKAMK HDEML++GLKPD+ TYKRL
Sbjct: 533 LCRERELRKAMKFHDEMLKMGLKPDRATYKRL 564


>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like isoform X1 [Solanum tuberosum]
           gi|565362693|ref|XP_006348080.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21170-like isoform X2 [Solanum tuberosum]
           gi|565362695|ref|XP_006348081.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21170-like isoform X3 [Solanum tuberosum]
          Length = 584

 Score =  159 bits (403), Expect = 6e-37
 Identities = 76/152 (50%), Positives = 104/152 (68%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RGF+    ++S ++  QC + +W+EAEEL ++I  +    +S  C   V+ YC  R I  
Sbjct: 428 RGFVPPVSQVSKFIVSQCEKRQWKEAEELLNVIFQRRLQFESFCCCSLVRHYCFSRRIDS 487

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           AI+LH +LE L   LD   Y + L SLFK +R EEA+K+FDYM+    L+SESFS+MIRG
Sbjct: 488 AISLHTELERLGVALDVETYGLLLDSLFKSRRREEALKIFDYMRTHDMLSSESFSIMIRG 547

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           LC E+E RKAM+LHD+ML+LG KPD++ YKRL
Sbjct: 548 LCQEQEFRKAMRLHDDMLKLGFKPDKKAYKRL 579


>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Solanum lycopersicum]
          Length = 584

 Score =  158 bits (399), Expect = 2e-36
 Identities = 75/152 (49%), Positives = 103/152 (67%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RGF+    ++S ++  QC + +W+EAEEL ++I  +G   +S  C   V+ YC  R I  
Sbjct: 428 RGFVPPVSQVSKFIVSQCEKHQWKEAEELLNVIFQKGLQFESFCCCSLVRHYCFSRRIDS 487

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           AI+LH +LE L   LD   Y + L  LFK +R EEA+K+FDYM+    L+S SFS+MIRG
Sbjct: 488 AISLHTELERLGVALDVETYGLLLDRLFKSRRHEEALKIFDYMRTHDMLSSGSFSIMIRG 547

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           LC E+E RKAM+LHD+ML+LG KPD++ YKRL
Sbjct: 548 LCQEEEFRKAMRLHDDMLKLGFKPDKKAYKRL 579


>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
           gi|482553811|gb|EOA18004.1| hypothetical protein
           CARUB_v10006439mg [Capsella rubella]
          Length = 585

 Score =  152 bits (383), Expect = 1e-34
 Identities = 71/154 (46%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RGF+   + LS  +   C + RWR AE+L D +M+     DS SCG  ++RYC   ++ K
Sbjct: 427 RGFVPCTRRLSEVLASLCRKRRWRHAEKLLDSVMEMEVYFDSFSCGILMERYCRSGKLDK 486

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMI 356
           A+ LH++++ +KG+LD   Y+  L  L   +R  +EEA++VF+YMK  K +NS+SF++MI
Sbjct: 487 AMELHERIKKMKGSLDVNAYNAVLDRLMMRQREMVEEAVRVFEYMKEMKSVNSKSFTIMI 546

Query: 357 RGLCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           +GLCH KE++KA + HDEML+LG+KPD  TYKR+
Sbjct: 547 QGLCHVKEMKKAKQSHDEMLKLGMKPDLATYKRV 580


>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
           gi|557114982|gb|ESQ55265.1| hypothetical protein
           EUTSA_v10024760mg [Eutrema salsugineum]
          Length = 584

 Score =  148 bits (373), Expect = 2e-33
 Identities = 73/154 (47%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RGF+    +LS  +   C + RW  AE+L D +M+     DS SCG  ++RYC   ++ K
Sbjct: 426 RGFVPCTLKLSEVLASLCRKRRWNRAEKLLDSVMEMEVHFDSFSCGLLMERYCRSGKLEK 485

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMI 356
           A+ LH+K++ +KG+LD   Y+  L  L   +R  +EEA++VF+YMK    +NS+SF++MI
Sbjct: 486 AMVLHEKIKKMKGSLDVNAYNAVLDRLMMRQRTMVEEAVQVFEYMKEMNTVNSKSFTIMI 545

Query: 357 RGLCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
            GLC  KE++KAMK HDEML+LGLKPD  TYKRL
Sbjct: 546 HGLCRVKEMKKAMKSHDEMLKLGLKPDLVTYKRL 579


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score =  147 bits (370), Expect = 4e-33
 Identities = 70/154 (45%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RGF+    +LS  +   C + RW+ AE+L D +M+     DS +CG  ++RYC   ++ K
Sbjct: 427 RGFVPCTHKLSEVLASMCRKRRWKSAEKLLDSVMEMEVYFDSFACGLLMERYCRSGKLEK 486

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMI 356
           A+ LH+K++ +KG+LD   Y+  L  L   ++  +EEA+ VF+YMK    +NS+SF++MI
Sbjct: 487 ALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMI 546

Query: 357 RGLCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           +GLC  KE++KAM+ HDEML LGLKPD  TYKRL
Sbjct: 547 QGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRL 580


>ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [Amborella trichopoda]
           gi|548861770|gb|ERN19141.1| hypothetical protein
           AMTR_s00061p00160470 [Amborella trichopoda]
          Length = 372

 Score =  126 bits (317), Expect = 6e-27
 Identities = 59/152 (38%), Positives = 98/152 (64%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           +GF  +   +S++++ QC++G W+EA EL  +++++G + +  +CG F++ YC    +  
Sbjct: 216 KGFYPDPLAISSHISSQCSKGGWQEANELLWVMLERGVMPNGFACGSFIRHYCEDGGLDY 275

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           A++LH+KL  L   L+   Y+I L  L+   ++EEA ++FD+M+     +S SF  MI  
Sbjct: 276 ALSLHEKLVKLGNVLNAPSYNILLDQLYNGGKLEEASEMFDHMRNKNVTSSASFITMISW 335

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
            C EK+  +A K+HDEML+ GLKPD+ TYKRL
Sbjct: 336 FCWEKKFSEARKMHDEMLKKGLKPDEATYKRL 367


>ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [Amborella trichopoda]
           gi|548830797|gb|ERM93720.1| hypothetical protein
           AMTR_s00004p00243870 [Amborella trichopoda]
          Length = 359

 Score =  125 bits (313), Expect = 2e-26
 Identities = 60/152 (39%), Positives = 93/152 (61%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           +GF  +   +S+Y++ QC++G W+EA EL  + +++G + D    G F++ YC    +  
Sbjct: 203 KGFYPDPLAISSYISAQCSKGGWQEANELLWVTLERGVMPDGFVWGSFIRHYCEDGHLDY 262

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRG 362
           A++LH+K       L+   Y+I L  L+ E ++EEA  +FDYM+     +S SF  MI  
Sbjct: 263 ALSLHEKFAKSGNVLNAPSYNILLNRLYNEGKLEEASGMFDYMRNKDVTSSASFMTMISW 322

Query: 363 LCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
            C EK+  +A K+HDEML+ GLKPD+ TYKRL
Sbjct: 323 FCREKKFSEARKMHDEMLKKGLKPDEATYKRL 354


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332659015|gb|AEE84415.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score =  105 bits (262), Expect = 1e-20
 Identities = 56/131 (42%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
 Frame = +3

Query: 75  EAEELFDLIMDQGCLLDSTSCGYFVKRYCSRR-EIGKAITLHDKLEDLKGTLDTAIYSIF 251
           E EEL   ++ +G    +    + ++ +  R  ++ KA+ LH+K++ +KG+LD   Y+  
Sbjct: 416 EEEELLVDVIKRGKEDGNPQRSFLIRLWKWRSGKLEKALVLHEKIKKMKGSLDVNAYNAV 475

Query: 252 LASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMKLHDEMLELG 425
           L  L   ++  +EEA+ VF+YMK    +NS+SF++MI+GLC  KE++KAM+ HDEML LG
Sbjct: 476 LDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLG 535

Query: 426 LKPDQRTYKRL 458
           LKPD  TYKRL
Sbjct: 536 LKPDLVTYKRL 546


>emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|7268914|emb|CAB79117.1|
           putative protein [Arabidopsis thaliana]
          Length = 534

 Score =  105 bits (262), Expect = 1e-20
 Identities = 56/131 (42%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
 Frame = +3

Query: 75  EAEELFDLIMDQGCLLDSTSCGYFVKRYCSRR-EIGKAITLHDKLEDLKGTLDTAIYSIF 251
           E EEL   ++ +G    +    + ++ +  R  ++ KA+ LH+K++ +KG+LD   Y+  
Sbjct: 399 EEEELLVDVIKRGKEDGNPQRSFLIRLWKWRSGKLEKALVLHEKIKKMKGSLDVNAYNAV 458

Query: 252 LASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMKLHDEMLELG 425
           L  L   ++  +EEA+ VF+YMK    +NS+SF++MI+GLC  KE++KAM+ HDEML LG
Sbjct: 459 LDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLG 518

Query: 426 LKPDQRTYKRL 458
           LKPD  TYKRL
Sbjct: 519 LKPDLVTYKRL 529


>ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313697|gb|EFH44120.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score =  102 bits (255), Expect = 9e-20
 Identities = 56/146 (38%), Positives = 91/146 (62%), Gaps = 4/146 (2%)
 Frame = +3

Query: 33  SNYVNKQCAEGRW-REAEELFDLIMDQGCLLDSTSCGYFVKRYCSRR-EIGKAITLHDKL 206
           + + N  C +     E EEL   ++ +G    +    + ++ +  R  ++ KA+ LH+K+
Sbjct: 384 NEFANALCRDDNSSEEGEELLVDVIKRGKEDGNPQRSFLIRLWKWRSGKLEKALELHEKI 443

Query: 207 EDLKGTLDTAIYSIFLASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKE 380
           + +KG+LD   Y+  L  L   ++  +EEA+ VF+YMK  K +NS+SF++MI+GLC  KE
Sbjct: 444 KKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVGVFEYMKEMKSVNSKSFTIMIQGLCRVKE 503

Query: 381 LRKAMKLHDEMLELGLKPDQRTYKRL 458
           ++KAM+ HDEML L +KPD  +YKRL
Sbjct: 504 MKKAMRSHDEMLRLDMKPDLVSYKRL 529


>ref|XP_004296042.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 563

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 44/136 (32%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
 Frame = +3

Query: 33  SNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLED 212
           S+ ++  C  G   EA ++FDL++ +GC++D  SC   +  YC  ++I +AI L +++  
Sbjct: 200 SSLMDGYCLRGEMGEARKIFDLMLRKGCMVDVWSCTILINGYCKHKKIDQAIELFEEMLR 259

Query: 213 LKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQL-NSESFSVMIRGLCHEKELRK 389
           L+   DT  YSI +    K  R++EA K+F  + +C  L N +++++++ GLC  ++L +
Sbjct: 260 LELVPDTYTYSILIDGFCKAGRMQEAEKLFSRLLSCGLLPNVQTYAILLDGLCSSQQLSR 319

Query: 390 AMKLHDEMLELGLKPD 437
           AM L  EM +  ++ D
Sbjct: 320 AMDLLREMEDKKMELD 335



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 54  CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDT 233
           C  GR +EAE+LF  ++  G L +  +    +   CS +++ +A+ L  ++ED K  LD 
Sbjct: 277 CKAGRMQEAEKLFSRLLSCGLLPNVQTYAILLDGLCSSQQLSRAMDLLREMEDKKMELDI 336

Query: 234 AIYSIFLASLFKEKRIEEAIKVFDYMKA-CKQLNSESFSVMIRGLCHEKELRKAMKLHDE 410
            IY++ +  + K  ++E A   F  + +   Q N  +++VMI GLC    L +A KL  E
Sbjct: 337 VIYTVIIEGMCKAGKLESATDFFSSLSSKGVQPNVRTYNVMINGLCKGGLLVEAEKLLRE 396

Query: 411 MLELGLKPDQRTYK 452
           M   G  PD  TYK
Sbjct: 397 MGAKGCSPDSCTYK 410


>ref|XP_004295753.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 690

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 47/141 (33%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
 Frame = +3

Query: 33  SNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLED 212
           S+ ++  C  G   EA+++FDL++ +G +++  SC   +  YC +++I +A  L D++  
Sbjct: 225 SSLMDGHCLRGEMDEAKQVFDLMVAKGSMVNVHSCNILINGYCKQKKIHEAKNLFDEM-P 283

Query: 213 LKGTL-DTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQL-NSESFSVMIRGLCHEKELR 386
           L+G + DT  YS  +   +K  R +EA K+F  M+A  QL ++ ++++++ GLC+ ++L 
Sbjct: 284 LRGLVPDTVTYSTLIDGFYKAGRQQEAEKLFSEMQASGQLPSNRTYNIILDGLCNNQQLS 343

Query: 387 KAMKLHDEMLELGLKPDQRTY 449
           KA++L  EM    LKPD   Y
Sbjct: 344 KAIELLREMEANKLKPDIVAY 364



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RG + +    S  ++     GR +EAE+LF  +   G L  + +    +   C+ +++ K
Sbjct: 285 RGLVPDTVTYSTLIDGFYKAGRQQEAEKLFSEMQASGQLPSNRTYNIILDGLCNNQQLSK 344

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQL-NSESFSVMIR 359
           AI L  ++E  K   D   Y+I + +LFK  +IE A  VF  + +   L +  ++++MIR
Sbjct: 345 AIELLREMEANKLKPDIVAYNIIIEALFKAGKIESATDVFSGLSSKGVLPDVWTYNIMIR 404

Query: 360 GLCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           GLC+   L +A KL  EM +    PD  TY  +
Sbjct: 405 GLCNGGILVEAEKLFREMEQKCCYPDGCTYNTI 437



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           RG + +    S+ +   C  GRW+EA  L + +  QG   D  +    V   C    + +
Sbjct: 145 RGIVPDVITYSSLIQGVCNIGRWKEAWRLLNEMASQGIFPDLITFNILVDGLCKEGRVVQ 204

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKAC-KQLNSESFSVMIR 359
           A ++   +       +T  YS  +        ++EA +VFD M A    +N  S +++I 
Sbjct: 205 ARSVVQIMIQRGIEPNTITYSSLMDGHCLRGEMDEAKQVFDLMVAKGSMVNVHSCNILIN 264

Query: 360 GLCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           G C +K++ +A  L DEM   GL PD  TY  L
Sbjct: 265 GYCKQKKIHEAKNLFDEMPLRGLVPDTVTYSTL 297


>ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 761

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   RGFIFEAKELSNYVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGK 182
           +G I +   +++ +   C     + A ELF+ +  +GC  D  +    +  YCSR ++ +
Sbjct: 401 KGIIPDVCTVNSLIQGLCLNSNHKVAMELFEEMKMKGCQPDGFTYSLLIDSYCSRGKLEE 460

Query: 183 AITLHDKLEDLKGTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACK-QLNSESFSVMIR 359
           A++L   +E      +  IY+  +    K KRIE+A ++FD M+      NS +++ +I 
Sbjct: 461 ALSLLKDMESSGCARNAVIYNTLIDGFCKNKRIEDAEEIFDQMELQGISRNSVTYNTLID 520

Query: 360 GLCHEKELRKAMKLHDEMLELGLKPDQRTYKRL 458
           GLC  + + +A +L D+M+  GLKPD+ TY  L
Sbjct: 521 GLCQNRRVEEASQLMDQMIMEGLKPDKFTYNSL 553