BLASTX nr result

ID: Rehmannia26_contig00022021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00022021
         (319 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS73753.1| hypothetical protein M569_01004 [Genlisea aurea]        92   5e-17
ref|XP_004253145.1| PREDICTED: pentatricopeptide repeat-containi...    69   8e-10
ref|XP_006349790.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_004305365.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06

>gb|EPS73753.1| hypothetical protein M569_01004 [Genlisea aurea]
          Length = 679

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = +3

Query: 78  SSTIEPTTQTQLLEDLRKIRVLIQQNRNESAKSHLRSLISLHSVSQLYTVFSQS-SPPPN 254
           SS++     TQL E+LRKIR+L+QQNR E+ K HL SLISLHS   LY  FS S S  P+
Sbjct: 20  SSSVCTVGGTQLSEELRKIRILLQQNRIETTKRHLGSLISLHSPPDLYAAFSDSVSASPS 79

Query: 255 TKPVFADTLLTVYAESKLPNK 317
           TKPVF D LLTVYA+SKLP++
Sbjct: 80  TKPVFRDALLTVYADSKLPDE 100


>ref|XP_004253145.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Solanum lycopersicum]
          Length = 790

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
 Frame = +3

Query: 3   IHMARRF------HRLLSKVRSTP---PSKLFCSSSTIEPTTQTQ--LLEDLRKIRVLIQ 149
           +H A +F      H L    RSTP     +L  S +   PT      L+E LR++R+LIQ
Sbjct: 4   LHRAFKFAGTGNQHLLCKFFRSTPFLHQEQLLSSINNENPTDSPSQNLVEQLRQLRILIQ 63

Query: 150 QNRNESAKSHLRSLISLHSVSQLYTVFSQSSPPPNTKPVFADTLLTVYAESKLPNK 317
           Q R E+AK  L +LI   SVSQLY++FS    P   KP+ +D L ++Y ESKL N+
Sbjct: 64  QRRMENAKGILGTLIHTSSVSQLYSLFS----PSPAKPLLSDLLFSLYLESKLINQ 115


>ref|XP_006349790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Solanum tuberosum]
          Length = 808

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 10/115 (8%)
 Frame = +3

Query: 3   IHMARRF------HRLLSKVRSTP--PSKLFCSSSTIEPTTQTQ--LLEDLRKIRVLIQQ 152
           +H A +F      H L    RSTP    +   S +  +PT  +   L E LR++R+L+QQ
Sbjct: 4   LHRAFKFAGTGNHHFLCKFFRSTPFLHQEELSSINNEKPTNSSSQNLEEQLRQLRILLQQ 63

Query: 153 NRNESAKSHLRSLISLHSVSQLYTVFSQSSPPPNTKPVFADTLLTVYAESKLPNK 317
            R E+AK  L +LI   SVSQLY++FS    P   KP+F+D L ++Y ESKL N+
Sbjct: 64  RRMENAKGILGTLIHTSSVSQLYSLFS----PSPAKPLFSDLLFSLYLESKLINQ 114


>ref|XP_004305365.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 802

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
 Frame = +3

Query: 9   MARRFHRLLSKVRSTPPSKLFCSS---STIEPTTQTQLLEDLRKIRVLIQQNRNESAKSH 179
           MARR   LL   +S P       S    T+    Q    E +RK+R+L+QQ R ++A   
Sbjct: 1   MARRVSLLLRLPKSLPTKTQNLRSLSVCTVSDQDQQHRHEQVRKLRILLQQGRTDAAARF 60

Query: 180 LRSLI----SLHSVSQLYTVFSQSSPPPNTKPVFADTLLTVYAESKLPNK 317
           ++SLI       S S LY +FS S+  P+  P F+D LLT   +SK+P +
Sbjct: 61  IKSLILPTSPFSSPSDLYDLFSLSA--PSITPAFSDMLLTACTDSKMPKQ 108


>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 29/129 (22%)
 Frame = +3

Query: 9   MARRFHRLLSKVRST----------PPSKLFCS--------SSTIEPTTQTQ-------L 113
           MA+R H     V ST          P  K FCS        S+T   TT  Q        
Sbjct: 1   MAKRIHLSKFSVGSTLNKPQKSLLLPSCKPFCSLTEKQEPTSTTNNSTTNLQGQVQEQAR 60

Query: 114 LEDLRKIRVLIQQNRNESAKSHLRSLI----SLHSVSQLYTVFSQSSPPPNTKPVFADTL 281
            E ++K++ L+QQ R E+A+  +RS++       S S LYT+FS SS P   KP+F+D L
Sbjct: 61  HEHVQKLQTLLQQGRTETARRLIRSMLLPKSPFSSPSHLYTLFSLSSTP--MKPLFSDML 118

Query: 282 LTVYAESKL 308
           L++ +ESK+
Sbjct: 119 LSICSESKM 127


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