BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00021900
         (928 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668...   261   3e-67
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   244   3e-62
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659...   243   6e-62
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   239   1e-60
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   233   6e-59
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   225   2e-56
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           225   2e-56
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   220   7e-55
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       219   2e-54
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   218   3e-54
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   215   2e-53
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   215   2e-53
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   214   3e-53
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   213   6e-53
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   211   4e-52
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   210   7e-52
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256...   209   2e-51
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   206   1e-50
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   203   9e-50
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   199   9e-49

>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
          Length = 603

 Score =  261 bits (666), Expect = 3e-67
 Identities = 122/273 (44%), Positives = 186/273 (68%)
 Frame = -1

Query: 922 SLFLSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQ 743
           ++ L K E L + Q  K  YL+Q+DKC++FFH+++KRN    FIA+I  +DG+ T SQD+
Sbjct: 157 TIMLRKTESLKFSQLIKNKYLLQADKCSKFFHALIKRNIHSRFIAAIRLEDGHKTSSQDE 216

Query: 742 VALEFIEFYKQLLGTKQNTQPPDPEIIGNGPLLDETQGTDLIKPITNSEILDALRDIGDD 563
           +AL F+  ++ L    + TQ P   I   GP +       L+ P +  E+ + +  + ++
Sbjct: 217 IALAFVNHFRNLFSAHELTQTPSISICNRGPKVPIDCFAALLCPTSKQEVWNVISVMDNN 276

Query: 562 RSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGD 383
           ++PG DG++  FFKK+W  +G+ + +AV EFF++G +LKQ NH I+ALIPK D +S+V  
Sbjct: 277 KAPGPDGFNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIALIPKHDQASQVNH 336

Query: 382 FRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRK 203
           FRPI+CC ++YK++SKILA R+A VL+ II   Q AF+K + M+++I L+QE+LR+Y  K
Sbjct: 337 FRPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNKKMMDNIFLIQEILRKYAWK 396

Query: 202 RTGARCTIKIDLRKAFDSISWDFLRDVLMGLGF 104
           R+  RC +KIDL KA+DSISW+FL  +L  +GF
Sbjct: 397 RSSPRCLLKIDLHKAYDSISWEFLDWMLKSIGF 429


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  244 bits (624), Expect = 3e-62
 Identities = 121/304 (39%), Positives = 189/304 (62%), Gaps = 1/304 (0%)
 Frame = -1

Query: 910  SKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALE 731
            S  E    QQK++  +L Q D  ++ F + VK     N I  +  +DG      D+V  E
Sbjct: 337  SHIEDSILQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEE 396

Query: 730  FIEFYKQLLGTKQNT-QPPDPEIIGNGPLLDETQGTDLIKPITNSEILDALRDIGDDRSP 554
             +EFYK+LLGT+ +T    D   +  G  L       LI+ + ++EI +AL  IG+D++P
Sbjct: 397  ILEFYKKLLGTRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAP 456

Query: 553  GSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRP 374
            G DG+++ FFKKSW ++ +++   ++EFF++  + +  N  ++ L+PK  H+++V +FRP
Sbjct: 457  GLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRP 516

Query: 373  IACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRKRTG 194
            IACC VIYK+ISK+L  RM  ++  +++ AQ+ F+ GR++ ++I L  EL+R Y RK   
Sbjct: 517  IACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMS 576

Query: 193  ARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFK 14
             RC +K+D+RKA+DS+ W FL  +L   GFP  FV WIMECVST SYS+ +NG     F+
Sbjct: 577  PRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQ 636

Query: 13   GQRG 2
             ++G
Sbjct: 637  ARKG 640


>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
          Length = 964

 Score =  243 bits (621), Expect = 6e-62
 Identities = 115/260 (44%), Positives = 174/260 (66%)
 Frame = -1

Query: 922  SLFLSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQ 743
            ++ L KAE + + Q  K  YL+Q+DKC++FFH+++KRN    FIA+I  +DG+ T SQD+
Sbjct: 705  TIMLRKAESMKFAQLIKNKYLLQADKCSKFFHALIKRNKHSRFIAAIRLEDGHNTSSQDE 764

Query: 742  VALEFIEFYKQLLGTKQNTQPPDPEIIGNGPLLDETQGTDLIKPITNSEILDALRDIGDD 563
            +AL F+  ++      + TQ P   I   GP +       L+ P +  ++ + +  + ++
Sbjct: 765  IALAFVNHFRNFFSAHELTQTPSISICNRGPKVPTDCFAALLCPTSKQKVWNIISVMANN 824

Query: 562  RSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGD 383
            ++PG DG++  FFKK+W  VG+ +  AV EFF++G +LKQ NH I+ LIPK D +S+V  
Sbjct: 825  KAPGPDGFNVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQLNHAIIVLIPKHDQASQVNH 884

Query: 382  FRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRK 203
            FRPI+CC ++YK++SKILA R+A VL+ II   Q AF+K R M+++I L+QE+LR+Y RK
Sbjct: 885  FRPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNRKMMDNIFLVQEILRKYARK 944

Query: 202  RTGARCTIKIDLRKAFDSIS 143
            R   RC +KIDL KA+D IS
Sbjct: 945  RPSPRCLLKIDLHKAYDFIS 964


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  239 bits (609), Expect = 1e-60
 Identities = 118/304 (38%), Positives = 180/304 (59%), Gaps = 1/304 (0%)
 Frame = -1

Query: 910  SKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALE 731
            S  ++   +QK++  +L   D  ++FF + +K    +N I  +  D G+      ++  E
Sbjct: 340  STIDESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNE 399

Query: 730  FIEFYKQLLGTKQNT-QPPDPEIIGNGPLLDETQGTDLIKPITNSEILDALRDIGDDRSP 554
               FY++LLGT  +  +  D  ++  G  L  T    L++PIT  EI  AL DI D ++P
Sbjct: 400  ICNFYRRLLGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAP 459

Query: 553  GSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRP 374
            G DG++S FFKKSW  + +++ + + +FF +G + K  N T + LIPK D +    D+RP
Sbjct: 460  GLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRP 519

Query: 373  IACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRKRTG 194
            IACC  +YK+ISKIL  R+  V+  ++D AQ  F+  R++ ++I L  EL+R YNR+   
Sbjct: 520  IACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVS 579

Query: 193  ARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFK 14
             RC IK+D+RKA+DS+ W FL  +L  LGFP +F+ WIM CV T SYS+ +NG     F 
Sbjct: 580  PRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFD 639

Query: 13   GQRG 2
             Q+G
Sbjct: 640  AQKG 643


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  233 bits (595), Expect = 6e-59
 Identities = 115/304 (37%), Positives = 186/304 (61%), Gaps = 1/304 (0%)
 Frame = -1

Query: 910 SKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALE 731
           S  E+  + QK++ N++   D  T+FFH+  K    +N I  ++ +DG      + +  E
Sbjct: 20  STIEEKIWMQKSRANWIQLGDSNTKFFHAYAKERRCQNNIKFLITEDGTRIDKHNLIKEE 79

Query: 730 FIEFYKQLLGTKQNTQPP-DPEIIGNGPLLDETQGTDLIKPITNSEILDALRDIGDDRSP 554
              FY +L+G+  ++ P  D  ++  GP+L + Q   L    T  E+ + L  +   ++P
Sbjct: 80  IRGFYLKLMGSSVDSLPMVDKNVVKRGPMLSQHQQDLLCSKFTAVEVKNVLFSMDSSKAP 139

Query: 553 GSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRP 374
           G DGY+  FFK SW  +G+ V DA+ +FF +G + K  N T + L+PK  + + V +FRP
Sbjct: 140 GIDGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRP 199

Query: 373 IACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRKRTG 194
           IACC VIYK+ISKIL +RM  VL+ ++   Q+AFVKGR + ++I L  EL++ Y+RK   
Sbjct: 200 IACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGIS 259

Query: 193 ARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFK 14
            RC +KIDL+KA++S+ W F++ +++ LGF + FV+W+M C++T SY+ +ING     F 
Sbjct: 260 PRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPFA 319

Query: 13  GQRG 2
            ++G
Sbjct: 320 AKKG 323


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  225 bits (573), Expect = 2e-56
 Identities = 111/311 (35%), Positives = 189/311 (60%), Gaps = 5/311 (1%)
 Frame = -1

Query: 919  LFLSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQV 740
            + LS AE+ F+ Q+++ ++  + D  T +FH +V      N I S+V  +G    SQ  +
Sbjct: 202  VLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGI 261

Query: 739  ALEFIEFYKQLLGTKQNTQPPDPEIIGNGPLL-----DETQGTDLIKPITNSEILDALRD 575
                + +Y++LLG+ ++    + E +    LL      + Q ++L K  T+ EI  A + 
Sbjct: 262  LDHCVTYYERLLGSIESPFSMEQEDMN---LLLTYRCSQDQCSELEKSFTDDEIKAAFKS 318

Query: 574  IGDDRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSS 395
            +  +++ G DGYS  FF+ +W+ +G +V  A+ EFF SG LLKQWN T L LIPK+ ++ 
Sbjct: 319  LPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNAC 378

Query: 394  KVGDFRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQ 215
             + +FRPI+C   +YK+ISK+L +R+  +L  +I  +Q+AF+ GR++ E++ L  E++  
Sbjct: 379  TISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHG 438

Query: 214  YNRKRTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSING 35
            YNR     R  +K+DL+KAFDS+ W+F+   L  L  P  +++WI +C++T S+++S+NG
Sbjct: 439  YNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNG 498

Query: 34   GTYGLFKGQRG 2
             T G F+  +G
Sbjct: 499  ATGGFFRSTKG 509


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  225 bits (573), Expect = 2e-56
 Identities = 111/311 (35%), Positives = 189/311 (60%), Gaps = 5/311 (1%)
 Frame = -1

Query: 919  LFLSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQV 740
            + LS AE+ F+ Q+++ ++  + D  T +FH +V      N I S+V  +G    SQ  +
Sbjct: 202  VLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGI 261

Query: 739  ALEFIEFYKQLLGTKQNTQPPDPEIIGNGPLL-----DETQGTDLIKPITNSEILDALRD 575
                + +Y++LLG+ ++    + E +    LL      + Q ++L K  T+ EI  A + 
Sbjct: 262  LDHCVTYYERLLGSIESPFSMEQEDMN---LLLTYRCSQDQCSELEKSFTDDEIKAAFKS 318

Query: 574  IGDDRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSS 395
            +  +++ G DGYS  FF+ +W+ +G +V  A+ EFF SG LLKQWN T L LIPK+ ++ 
Sbjct: 319  LPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNAC 378

Query: 394  KVGDFRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQ 215
             + +FRPI+C   +YK+ISK+L +R+  +L  +I  +Q+AF+ GR++ E++ L  E++  
Sbjct: 379  TISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHG 438

Query: 214  YNRKRTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSING 35
            YNR     R  +K+DL+KAFDS+ W+F+   L  L  P  +++WI +C++T S+++S+NG
Sbjct: 439  YNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNG 498

Query: 34   GTYGLFKGQRG 2
             T G F+  +G
Sbjct: 499  ATGGFFRSTKG 509


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  220 bits (560), Expect = 7e-55
 Identities = 121/310 (39%), Positives = 179/310 (57%), Gaps = 7/310 (2%)
 Frame = -1

Query: 913  LSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVAL 734
            ++  E+ + +Q +K ++L   DK  + FH      A +N I  I ++DG+   ++D +  
Sbjct: 764  IASIEEKYLKQVSKLHWLKVGDKNNKTFHRAATARAAQNSIREIQKEDGSTATTKDDIKN 823

Query: 733  EFIEFYKQLLGTKQNTQPPDPEIIGNGPLLD-------ETQGTDLIKPITNSEILDALRD 575
            E   F+++ L       P D E I    L           +   L   ++  EI  AL  
Sbjct: 824  ETERFFQEFL----QLIPNDYEGITVEKLTSLLPYHCSPAEKDMLTASVSAKEIRGALFS 879

Query: 574  IGDDRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSS 395
            + +D+SPG DGY+S F+K++W  +G +   AVK FF  G L K  N TILALIPK   + 
Sbjct: 880  MPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPKKLEAK 939

Query: 394  KVGDFRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQ 215
            ++ D+RPI+CC VIYK+ISKI+A R+  VL   I G Q+AFVK R ++E++ L  EL++ 
Sbjct: 940  EMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKD 999

Query: 214  YNRKRTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSING 35
            Y++     RC IKID+ KAFDS+ W FL++VL  L FP  FV W+M CV+T S+S+ +NG
Sbjct: 1000 YHKDTISGRCAIKIDISKAFDSVQWSFLKNVLSALDFPPEFVHWVMLCVTTASFSVQVNG 1059

Query: 34   GTYGLFKGQR 5
               G F+  R
Sbjct: 1060 ELAGYFQSSR 1069


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  219 bits (557), Expect = 2e-54
 Identities = 111/311 (35%), Positives = 182/311 (58%), Gaps = 7/311 (2%)
 Frame = -1

Query: 913  LSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVAL 734
            L+ AE+ F++QK++ ++  + D  T++FH +       N I+++   +G    SQ+ +  
Sbjct: 344  LTAAEESFFRQKSRISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILD 403

Query: 733  EFIEFYKQLLGTKQNTQPPDPEIIGNGPL-------LDETQGTDLIKPITNSEILDALRD 575
                ++  LLG +      DP ++    +           Q  +L    +N +I  AL  
Sbjct: 404  LCASYFGSLLGDEV-----DPYLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFS 458

Query: 574  IGDDRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSS 395
            +  ++S G DG+++ FF  SW+ VG +V DA+KEFFSSGCLLKQWN T + LIPK  + +
Sbjct: 459  LPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPT 518

Query: 394  KVGDFRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQ 215
               DFRPI+C   +YK+I+++L  R+  +L  +I  AQ+AF+ GR++ E++ L  +L+  
Sbjct: 519  CTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHG 578

Query: 214  YNRKRTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSING 35
            YN      R  +K+DL+KAFDS+ W+F+   L  L  P  F++WI +C+ST ++++SING
Sbjct: 579  YNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSING 638

Query: 34   GTYGLFKGQRG 2
            G  G FK  +G
Sbjct: 639  GNGGFFKSTKG 649


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  218 bits (555), Expect = 3e-54
 Identities = 119/307 (38%), Positives = 175/307 (57%), Gaps = 7/307 (2%)
 Frame = -1

Query: 901  EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 722
            E+ + +QK+K ++    D+ T+ FH         N I  I+ +DG      D++  E   
Sbjct: 353  EEKYLKQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAER 412

Query: 721  FYKQLLGTKQNTQPPDPEIIGNGPL-------LDETQGTDLIKPITNSEILDALRDIGDD 563
            F+++ L       P D E +    L         +     LI+P+T  EI   L  +  D
Sbjct: 413  FFREFL----QLIPNDFEGVTITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSD 468

Query: 562  RSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGD 383
            +SPG DGY+S FFK +W  +G++   AV+ FF+ G L K  N TILALIPK   + ++ D
Sbjct: 469  KSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKD 528

Query: 382  FRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRK 203
            +RPI+CC V+YK+ISKI+A R+  VL   I G Q+AFVK R ++E++ L  EL++ Y++ 
Sbjct: 529  YRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKD 588

Query: 202  RTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYG 23
                RC IKID+ KAFDS+ W FL +V   LGFP  F+ WI  C++T S+S+ +NG   G
Sbjct: 589  TISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAG 648

Query: 22   LFKGQRG 2
             F+  RG
Sbjct: 649  YFQSSRG 655


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  215 bits (547), Expect = 2e-53
 Identities = 117/312 (37%), Positives = 180/312 (57%), Gaps = 8/312 (2%)
 Frame = -1

Query: 913  LSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVAL 734
            L+KAE+ F+ QK+  ++L + D  T +FH +       N I  ++ D G    +Q  +  
Sbjct: 341  LAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKE 400

Query: 733  EFIE----FYKQLL----GTKQNTQPPDPEIIGNGPLLDETQGTDLIKPITNSEILDALR 578
               E    F++ LL    G     Q     ++     +D+    DL +  ++ +I +A  
Sbjct: 401  GIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQIN--DLERSFSDLDIQEAFF 458

Query: 577  DIGDDRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHS 398
             +  +++ G DGYSS FFK  W  VG +V +AV+EFF SG LLKQWN T L LIPK  +S
Sbjct: 459  SLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNS 518

Query: 397  SKVGDFRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLR 218
            SK+ DFRPI+C   +YK+I+K+L +R+  +L+ +I  +Q+AF+ GR + E++ L  E++ 
Sbjct: 519  SKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVH 578

Query: 217  QYNRKRTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSIN 38
             YN K   +R  +K+DLRKAFDS+ WDF+      L  P  FV WI +C+ST  +S+ +N
Sbjct: 579  GYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVN 638

Query: 37   GGTYGLFKGQRG 2
            G + G FK  +G
Sbjct: 639  GSSSGFFKSNKG 650


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  215 bits (547), Expect = 2e-53
 Identities = 117/312 (37%), Positives = 180/312 (57%), Gaps = 8/312 (2%)
 Frame = -1

Query: 913  LSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVAL 734
            L+KAE+ F+ QK+  ++L + D  T +FH +       N I  ++ D G    +Q  +  
Sbjct: 341  LAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKE 400

Query: 733  EFIE----FYKQLL----GTKQNTQPPDPEIIGNGPLLDETQGTDLIKPITNSEILDALR 578
               E    F++ LL    G     Q     ++     +D+    DL +  ++ +I +A  
Sbjct: 401  GIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQIN--DLERSFSDLDIQEAFF 458

Query: 577  DIGDDRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHS 398
             +  +++ G DGYSS FFK  W  VG +V +AV+EFF SG LLKQWN T L LIPK  +S
Sbjct: 459  SLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNS 518

Query: 397  SKVGDFRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLR 218
            SK+ DFRPI+C   +YK+I+K+L +R+  +L+ +I  +Q+AF+ GR + E++ L  E++ 
Sbjct: 519  SKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVH 578

Query: 217  QYNRKRTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSIN 38
             YN K   +R  +K+DLRKAFDS+ WDF+      L  P  FV WI +C+ST  +S+ +N
Sbjct: 579  GYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVN 638

Query: 37   GGTYGLFKGQRG 2
            G + G FK  +G
Sbjct: 639  GSSSGFFKSNKG 650


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  214 bits (546), Expect = 3e-53
 Identities = 110/307 (35%), Positives = 181/307 (58%), Gaps = 3/307 (0%)
 Frame = -1

Query: 913  LSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVAL 734
            L+ AE+ F  QK++  +L   D  T FFH ++      N I  ++   G    + D++  
Sbjct: 342  LALAEERFLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQT 401

Query: 733  EFIEFYKQLLGTKQNTQPPDPEIIGNGPL---LDETQGTDLIKPITNSEILDALRDIGDD 563
              ++F+K+L G+  +    +     N       DE     L   ++ ++I      +  +
Sbjct: 402  HCVDFFKELFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSN 461

Query: 562  RSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGD 383
            +SPG DGY+S FFKK+W+ VG  +  AV+EFF SG LL QWN T + ++PK  ++ ++ +
Sbjct: 462  KSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITE 521

Query: 382  FRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRK 203
            FRPI+CC  IYK+ISK+LA R+ ++L   I  +Q+AFVKGR + E++ L  EL++ + + 
Sbjct: 522  FRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQA 581

Query: 202  RTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYG 23
               +R  +K+DLRKAFDS+ W F+ + L     P  FV+WI +C+++TS+S++++G   G
Sbjct: 582  NISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCG 641

Query: 22   LFKGQRG 2
             FKG +G
Sbjct: 642  YFKGSKG 648


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score =  213 bits (543), Expect = 6e-53
 Identities = 118/315 (37%), Positives = 179/315 (56%), Gaps = 9/315 (2%)
 Frame = -1

Query: 919  LFLSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQV 740
            L L KAE+ F+ Q+++  ++ + D  T +FH +       N I  I+ D+G    +Q  +
Sbjct: 291  LILVKAEESFFCQRSRVTWMGEGDSNTSYFHRMADSRKAVNTIHIIIDDNGVKIDTQLGI 350

Query: 739  ALEFIEFYKQLLGTKQNTQPPDPEIIGNGPLL-----DETQGTDLIKPITNSEILDALRD 575
                IE++  LLG +     P   I  +  LL        Q  +L    +  +I  A   
Sbjct: 351  KEHCIEYFSNLLGGEVG---PPMLIQEDFDLLLPFRCSHDQKKELAMSFSRQDIKSAFFS 407

Query: 574  IGDDRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSS 395
               +++ G DG+   FFK++W+ +G +V DAV EFF+S  LLKQWN T L LIPK  ++S
Sbjct: 408  FPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVLIPKITNAS 467

Query: 394  KVGDFRPIACCK----VIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQE 227
            K+ DFRPI+C       +YK+I+++L  R+  +L  +I   Q+AF+ GR + E++ L  E
Sbjct: 468  KMNDFRPISCNDFGPITLYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFLAENVLLATE 527

Query: 226  LLRQYNRKRTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSL 47
            L++ YNR+    R  +K+DLRKAFDSI WDF+   L  +G P  FV WI +C+ST ++S+
Sbjct: 528  LVQGYNRQNIDPRGMLKVDLRKAFDSIRWDFIISALKAIGIPDRFVYWITQCISTPTFSV 587

Query: 46   SINGGTYGLFKGQRG 2
             +NG T G FK  RG
Sbjct: 588  CVNGNTGGFFKSTRG 602


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  211 bits (536), Expect = 4e-52
 Identities = 110/306 (35%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
 Frame = -1

Query: 913  LSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVAL 734
            L++AE  F+ Q+++ N+L + D  + +FH +       N I  +    G+    Q  +  
Sbjct: 241  LAEAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLEN 300

Query: 733  EFIEFYKQLLGTKQNTQPPDPEIIGN--GPLLDETQGTDLIKPITNSEILDALRDIGDDR 560
              +E+++  LG++Q     +   I N         Q   L  P ++ +I +A   +  ++
Sbjct: 301  HCVEYFQSNLGSEQGLPLFEQADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNK 360

Query: 559  SPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDF 380
            + G DG+S  FF   W  +G +V +A+ EFF+SG LLKQWN T L LIPK  ++S + DF
Sbjct: 361  ASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDF 420

Query: 379  RPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRKR 200
            RPI+C   +YK+ISK+L  R+ D L   I  +Q+AF+ GR  +E++ L  EL+  YN+K 
Sbjct: 421  RPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKN 480

Query: 199  TGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGL 20
                  +K+DLRKAFDS+ WDF+   L  L  P  F  WI+EC+ST S+S+ +NG + G 
Sbjct: 481  IAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGH 540

Query: 19   FKGQRG 2
            F   +G
Sbjct: 541  FWSSKG 546


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  210 bits (534), Expect = 7e-52
 Identities = 113/290 (38%), Positives = 162/290 (55%), Gaps = 7/290 (2%)
 Frame = -1

Query: 850 DKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIEFYKQLLGTKQNTQPPDP 671
           D+  + FH  +      N I  IV  DG    SQ  +  E + +++  L     T P D 
Sbjct: 91  DRNNKTFHRAITTREAVNSIREIVTRDGLVVTSQQDIQTEAVNYFQDFL----QTIPADY 146

Query: 670 EIIGNGPL-------LDETQGTDLIKPITNSEILDALRDIGDDRSPGSDGYSSAFFKKSW 512
           E +    L         E     L + +T  EI   +  +  D+SPG DGY+S F+K SW
Sbjct: 147 EGMCVEELENLLPFRCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASW 206

Query: 511 TTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPIACCKVIYKLISKI 332
             +G++V  A++ FF+ G L K  N TILALIPK   + ++ D+RPI+CC V+YK ISKI
Sbjct: 207 EIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKI 266

Query: 331 LAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRKRTGARCTIKIDLRKAFD 152
           LA R+  +L   I G Q+AFVK R ++E++ L  EL++ Y++     RC +KID+ KAFD
Sbjct: 267 LANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFD 326

Query: 151 SISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQRG 2
           S+ W FL  VL  + FP  F+ WI  C+ST S+S+ +NG   G F+  RG
Sbjct: 327 SLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARG 376


>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
           lycopersicum]
          Length = 421

 Score =  209 bits (531), Expect = 2e-51
 Identities = 104/302 (34%), Positives = 163/302 (53%)
 Frame = -1

Query: 910 SKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALE 731
           S  E+   +QKA+  ++   D   ++F S++K   +   I +I+   G       ++  E
Sbjct: 33  SMIEESAQRQKARAKWIQLGDANNKYFSSVIKERTQNKHIRNILSIHGRMLYEPQEIQDE 92

Query: 730 FIEFYKQLLGTKQNTQPPDPEIIGNGPLLDETQGTDLIKPITNSEILDALRDIGDDRSPG 551
            + FYK L+GT                             +T  +I  AL+ IG+D++PG
Sbjct: 93  VVLFYKSLMGT---------------------------SAVTEEKIFAALQSIGNDKAPG 125

Query: 550 SDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPI 371
            DGY++ FFK +W  +   + + V+ FF  G L K +N T+++LIPK      V ++R I
Sbjct: 126 IDGYNAFFFKYTWKIIKNDIIEVVQSFFKPGKLFKPFNCTLVSLIPKVQSPKNVKEYRTI 185

Query: 370 ACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRKRTGA 191
            CC V+YK+ISK++  RM DV+  +I  +Q  F+ GR + E+I L  EL+  Y RK    
Sbjct: 186 TCCTVLYKIISKVITNRMHDVIHNVICDSQVGFILGRKISENILLAHELVNSYTRKNISP 245

Query: 190 RCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKG 11
           R  +KIDL+K +DS+ W FL+ V++GLGFP +F  W+M CV T +Y++ +NG T   F  
Sbjct: 246 RSMLKIDLQKVYDSVEWPFLKQVMVGLGFPDMFTQWVMHCVKTVNYTIVVNGQTTQRFDA 305

Query: 10  QR 5
            R
Sbjct: 306 AR 307


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  206 bits (524), Expect = 1e-50
 Identities = 109/302 (36%), Positives = 171/302 (56%), Gaps = 5/302 (1%)
 Frame = -1

Query: 892  FYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIEFYK 713
            F+QQ+ KC +    D  +R+F    KR  +KN I  I    G    S+  +  EF+ ++ 
Sbjct: 344  FWQQRVKCKWKAWEDTNSRWFFRKAKRRKQKNEILVIKNSAGKWVSSKQDIQGEFLGYFA 403

Query: 712  QLLGTKQNTQPPDPEIIGNG---PLLDETQGTDLIKPITNSEILDALRDIGDDRSPGSDG 542
             +    Q++Q    E+ G     P +D  Q  DLIKP+T  E+ + +  +G  ++PG DG
Sbjct: 404  DIFQGSQHSQEYWEELDGIRHLIPQIDLMQREDLIKPVTREEVRNVVFQMGSLKAPGPDG 463

Query: 541  YSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPIACC 362
              + F++K W+ VGE +  AV  FF++G +L++WN T + LIPK +   +   FRPI+ C
Sbjct: 464  IPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNICLIPKVERPEQACQFRPISLC 523

Query: 361  KVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRKRTGAR-- 188
             VIYK+ISKI+A R+  +L  I+   Q AFV GR + ++  +  E++    +++ G    
Sbjct: 524  NVIYKIISKIIANRLKPILKSIVTPYQNAFVPGRLISDNCLIAHEVVNLIKQRKKGTHFL 583

Query: 187  CTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYGLFKGQ 8
              +KID+ KA+D + WDFL  +L  +GFP  +  WIM+CV+T SYS+ +NG     FK  
Sbjct: 584  AALKIDMFKAYDKVDWDFLFWLLTQMGFPSFYRQWIMQCVTTVSYSIIVNGEPTTRFKPS 643

Query: 7    RG 2
             G
Sbjct: 644  CG 645


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  203 bits (516), Expect = 9e-50
 Identities = 109/306 (35%), Positives = 175/306 (57%), Gaps = 7/306 (2%)
 Frame = -1

Query: 901  EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 722
            E+ F +Q++K ++L   D+  + FH  V     +N I  I+  DG+    ++++  E   
Sbjct: 241  EEKFLKQRSKLHWLDIGDRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAEH 300

Query: 721  FYKQLLGTKQNTQPPDPEIIGNGPLLD-------ETQGTDLIKPITNSEILDALRDIGDD 563
             +++ L       P D E I    L D       ++    L   ++  EI   +  + +D
Sbjct: 301  HFREFL----QLIPNDFEGIAVEELQDLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPND 356

Query: 562  RSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGD 383
            +SPG DGY++ F+K +W  +G +   A++ FF+ G L K  N TILALIPK   + ++ D
Sbjct: 357  KSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKD 416

Query: 382  FRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQYNRK 203
            +RPI+CC V+YK+ISKI+A R+  VL   I G Q+AFVK R ++E++ L  E+++ Y++ 
Sbjct: 417  YRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKD 476

Query: 202  RTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSINGGTYG 23
               +RC +KID+ KAFDS+ W FL +VL  + FP  F  WI  C++T S+S+ +NG   G
Sbjct: 477  SVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAG 536

Query: 22   LFKGQR 5
            +F   R
Sbjct: 537  VFSSAR 542


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  199 bits (507), Expect = 9e-49
 Identities = 114/311 (36%), Positives = 171/311 (54%), Gaps = 7/311 (2%)
 Frame = -1

Query: 913  LSKAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVAL 734
            LS+ E+ F +QK+K +++   D    +FH   +    +N I  I   +     + +++  
Sbjct: 646  LSELEEGFLKQKSKLHWMNVGDGNNSYFHKAAQVRKMRNSIREIRGPNAETLQTSEEIKG 705

Query: 733  EFIEFYKQLLGTKQNTQPPDPEIIGNGPLLD-------ETQGTDLIKPITNSEILDALRD 575
            E   F+ + L    N Q  D   I    L +        T    L + +T  EI   L  
Sbjct: 706  EAERFFNEFL----NRQSGDFHGISVEDLRNLMSYRCSVTDQNILTREVTGEEIQKVLFA 761

Query: 574  IGDDRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSS 395
            + +++SPG DGY+S FFK +W+  G     A++ FF  G L K  N TILALIPK D + 
Sbjct: 762  MPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAI 821

Query: 394  KVGDFRPIACCKVIYKLISKILAARMADVLDPIIDGAQAAFVKGRNMVEHIHLMQELLRQ 215
            ++ D+RPI+CC V+YK+ISKILA R+  +L   I   Q+AFVK R ++E++ L  EL++ 
Sbjct: 822  EMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKD 881

Query: 214  YNRKRTGARCTIKIDLRKAFDSISWDFLRDVLMGLGFPHLFVSWIMECVSTTSYSLSING 35
            Y+++    RC +KID+ KAFDS+ W FL + L  L FP  F  WI  C+ST ++S+ +NG
Sbjct: 882  YHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNG 941

Query: 34   GTYGLFKGQRG 2
               G F   RG
Sbjct: 942  ELAGFFGSSRG 952