BLASTX nr result

ID: Rehmannia26_contig00021895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00021895
         (551 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006368725.1| DNA-binding family protein, partial [Populus...    56   7e-06
ref|XP_002304442.2| DNA-binding family protein [Populus trichoca...    56   7e-06
ref|XP_002329847.1| predicted protein [Populus trichocarpa]            56   7e-06

>ref|XP_006368725.1| DNA-binding family protein, partial [Populus trichocarpa]
           gi|550346812|gb|ERP65294.1| DNA-binding family protein,
           partial [Populus trichocarpa]
          Length = 287

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 27/56 (48%), Positives = 34/56 (60%)
 Frame = -3

Query: 549 KKHKPESMTXXXXXXXXXSNAGMDDAYHTSPSFRGDSWSSMPPDSRNKPTDINVTL 382
           KK K +S++          ++       +S SFRGDSWS +PPDSRNKP DINVTL
Sbjct: 228 KKQKHDSLSGVVLTAAIPISSADPKTNFSSSSFRGDSWSPLPPDSRNKPADINVTL 283


>ref|XP_002304442.2| DNA-binding family protein [Populus trichocarpa]
           gi|550342987|gb|EEE79421.2| DNA-binding family protein
           [Populus trichocarpa]
          Length = 332

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = -3

Query: 549 KKHKPESMTXXXXXXXXXSNAGMDDAYHTSPSFRGDSWSSMPPDSRNKPTDINVTL 382
           KK K +S++          +     +  +SPSFRGDSWS +PP+SRNKP DIN+TL
Sbjct: 274 KKQKHDSLSGVMPTAAIPISIADPKSNFSSPSFRGDSWSPLPPESRNKPADINLTL 329


>ref|XP_002329847.1| predicted protein [Populus trichocarpa]
          Length = 297

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 27/56 (48%), Positives = 34/56 (60%)
 Frame = -3

Query: 549 KKHKPESMTXXXXXXXXXSNAGMDDAYHTSPSFRGDSWSSMPPDSRNKPTDINVTL 382
           KK K +S++          ++       +S SFRGDSWS +PPDSRNKP DINVTL
Sbjct: 238 KKQKHDSLSGVVLTAAIPISSADPKTNFSSSSFRGDSWSPLPPDSRNKPADINVTL 293


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