BLASTX nr result

ID: Rehmannia26_contig00021512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00021512
         (631 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ17298.1| hypothetical protein PRUPE_ppa018570mg, partial [...    70   5e-10
ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581...    68   2e-09
ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251...    66   9e-09
gb|EXC20319.1| putative ATP-dependent DNA helicase HFM1 [Morus n...    61   3e-07
ref|XP_002298526.2| hypothetical protein POPTR_0001s35040g [Popu...    58   2e-06
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...    57   3e-06

>gb|EMJ17298.1| hypothetical protein PRUPE_ppa018570mg, partial [Prunus persica]
          Length = 1214

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
 Frame = +3

Query: 3    VFDHIRTKAKTLPVLPISNDTCSPSLEAFTRIRKRTRERHLELDNGIEVFEVQESSKILR 182
            VFDHIR KAK  PVL  SN  CSPS E     RKR RE+ LE  N +EV E  E +KI R
Sbjct: 951  VFDHIREKAKNFPVLAASNAVCSPSSERLVLTRKRAREKQLEPHNEVEVLEELEWNKIPR 1010

Query: 183  -SIQYP--EFAEPEQNMHINCPPNNHSNLMSDPEFWGGEGMLTTENQNIESGKLTEETIL 353
             ++  P  E  E EQN H     +  + L  +P    G+G   T           EETI 
Sbjct: 1011 WAVVNPSSESKETEQNQHNLM--DERAGLPLEP----GDGAFKTSG---------EETIF 1055

Query: 354  EH 359
            EH
Sbjct: 1056 EH 1057


>ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581133 [Solanum tuberosum]
          Length = 1891

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
 Frame = +3

Query: 3    VFDHIRTKAKTLPVLPISNDTCSPSLEAFTRIRKRTRERHLELDNGIEVFEVQESSK--- 173
            VFDHIR KAK LP L     TC PSLE    IRKRTRE  L ++N + V E    +K   
Sbjct: 1618 VFDHIREKAKNLPALTSLKGTCLPSLETLNLIRKRTREEQLLVENAVGVSEEVRRTKVPY 1677

Query: 174  ---ILRSIQYPEFAEPEQNMHINCPPNNH--SNLMSDPEFWGGEGMLTTENQNIESGKLT 338
               +++S QY +  E     + +  P +H  SN +  P+     G L  E  ++ S  + 
Sbjct: 1678 HNMVIQSAQYIDLEENRPFSNKDQRPYSHHVSNAIYLPD---ERGELFFETGSVPSETIA 1734

Query: 339  EETILEHGKVPS 374
            EE I ++  + S
Sbjct: 1735 EEMIFKYNPIDS 1746


>ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251951 [Solanum
            lycopersicum]
          Length = 1933

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
 Frame = +3

Query: 3    VFDHIRTKAKTLPVLPISNDTCSPSLEAFTRIRKRTRERHLELDNGIEVFEVQESSKI-- 176
            +FDHIR KAK LP L     T  PSLE    IRKRTRE+ L L+N + V E    +K+  
Sbjct: 1660 IFDHIREKAKNLPALTSLKGTRLPSLETLNLIRKRTREKQLLLENAVGVSEELRRTKVPC 1719

Query: 177  -LRSIQYPEFAEPEQNMHIN----CPPNNH-SNLMSDPEFWGGEGMLTTENQNIESGKLT 338
                IQ  E+ + E+N   +     P ++H SN +  P+     G L  E  ++ S  + 
Sbjct: 1720 HNMVIQSAEYIDLEENRPFSNKDQIPYSHHVSNAIYLPD---ERGELFFETGSVPSETIA 1776

Query: 339  EETILEHGKVPS 374
            EETI ++  + S
Sbjct: 1777 EETIFKYNPIDS 1788


>gb|EXC20319.1| putative ATP-dependent DNA helicase HFM1 [Morus notabilis]
          Length = 1202

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 46/128 (35%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
 Frame = +3

Query: 3    VFDHIRTKAKTLPVLPISNDTCSPSLEAFTRIRKRTRERHLELDNGIEVFEVQESSKILR 182
            +FDHIR KAK+ P L  S+    PS E     RKRTRE  LE    IEV E  E ++  R
Sbjct: 920  IFDHIREKAKSFPDLAASSIAYLPSTETLNLARKRTREEELEFLREIEVLEEIEKNRSQR 979

Query: 183  -------SIQYPEFAEPEQNMHINCPPNNHSNLMSDPEF--WGGEGMLTTENQNIESGKL 335
                   S++  E    +QN+  +  P N+    S   F      G L++E +      L
Sbjct: 980  QTLVVKPSVETSEGDPNKQNIKNSPSPQNNITATSSWPFNLMEERGGLSSEAEEGMVKTL 1039

Query: 336  TEETILEH 359
            TEETI +H
Sbjct: 1040 TEETIFDH 1047


>ref|XP_002298526.2| hypothetical protein POPTR_0001s35040g [Populus trichocarpa]
            gi|550348915|gb|EEE83331.2| hypothetical protein
            POPTR_0001s35040g [Populus trichocarpa]
          Length = 1175

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = +3

Query: 3    VFDHIRTKAKTLPVLPISNDTCSPSLEAFTRIRKRTRERHLELDNGIEVFEVQESSKI 176
            +F+HIR KAK  P+L  S++ CSPS EA    RKR+R++ +ELD+     E  E SKI
Sbjct: 876  IFEHIREKAKNFPLLTSSSNVCSPSSEAMLLTRKRSRDKAIELDSAPNATEETEGSKI 933


>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 48/129 (37%), Positives = 52/129 (40%), Gaps = 10/129 (7%)
 Frame = +3

Query: 3    VFDHIRTKAKTLPVLPISNDTCSPSLEAFTRIRKRTRERHLELDNGIEVFEVQESSKILR 182
            +FDHIR KAK  P    S   CSPSLE     RK   E  L LD   +  EV E SK  +
Sbjct: 1686 IFDHIREKAKNFPNFTPSRTACSPSLETHLFTRKHRHENDLMLDGKPDAIEVTEGSKTSQ 1745

Query: 183  SIQY---PEFAEPEQNMHINCPPNNHSNLMSDPEFWGG--EGMLTTENQNIESG-----K 332
                    EF E E N H         N+ S P          L T N   E G      
Sbjct: 1746 QTVLNLTSEFREMEHNEH---------NIKSSPTLQPSTTARSLFTMNLMEEKGGHNMRN 1796

Query: 333  LTEETILEH 359
            LTEETI  H
Sbjct: 1797 LTEETIFGH 1805


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