BLASTX nr result

ID: Rehmannia26_contig00021428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00021428
         (382 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ16167.1| hypothetical protein PRUPE_ppa001734mg [Prunus pe...    69   7e-10
ref|NP_001274977.1| granule-bound starch synthase 2, chloroplast...    65   9e-09
ref|XP_004232219.1| PREDICTED: granule-bound starch synthase 2, ...    65   1e-08
ref|XP_006482606.1| PREDICTED: granule-bound starch synthase 2, ...    60   4e-07
ref|XP_006431165.1| hypothetical protein CICLE_v10011124mg [Citr...    60   4e-07
gb|EOY03481.1| Starch synthase 2 [Theobroma cacao]                     59   5e-07

>gb|EMJ16167.1| hypothetical protein PRUPE_ppa001734mg [Prunus persica]
          Length = 773

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
 Frame = +1

Query: 13  MASMGSFLAGVD----SSVILHSSNHHSPMVPLLAYRPRKRVEVGAFADCNSAGFSRNLT 180
           MAS+GS    ++    SSV+LHS+N+     P   +RP + +EV         G +  + 
Sbjct: 1   MASIGSLPFMIETKTESSVLLHSNNNRRLRFPFFTHRPGRSIEV--------TGINAEVV 52

Query: 181 VDSFSRLSRCNGRRRWTTQHVKAXXXXXXXXXXXXXXXXALQATIEKSKKVLEMQRDLFQ 360
                +++ C   + W  + ++A                AL+ATIEKSKKVL MQRDL Q
Sbjct: 53  GMCSRQINWCTKGKLWKIEPLRATGKVSVEGEDGGEPEDALRATIEKSKKVLAMQRDLLQ 112

Query: 361 QIAERKK 381
           QIAER+K
Sbjct: 113 QIAERRK 119


>ref|NP_001274977.1| granule-bound starch synthase 2, chloroplastic/amyloplastic
           precursor [Solanum tuberosum]
           gi|57015403|sp|Q43847.3|SSY2_SOLTU RecName:
           Full=Granule-bound starch synthase 2,
           chloroplastic/amyloplastic; AltName: Full=Granule-bound
           starch synthase II; Short=GBSS-II; Short=SS II; Flags:
           Precursor gi|48927500|emb|CAA61241.2| soluble starch
           synthase II precursor [Solanum tuberosum]
          Length = 767

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 41/113 (36%), Positives = 54/113 (47%)
 Frame = +1

Query: 43  VDSSVILHSSNHHSPMVPLLAYRPRKRVEVGAFADCNSAGFSRNLTVDSFSRLSRCNGRR 222
           +++S++LHS N   P +PLLA RP+K                        S +   +  +
Sbjct: 1   MENSILLHSGNQFHPNLPLLALRPKK-----------------------LSLIHGSSREQ 37

Query: 223 RWTTQHVKAXXXXXXXXXXXXXXXXALQATIEKSKKVLEMQRDLFQQIAERKK 381
            W  + VKA                ALQ TIEKSKKVL MQ+DL QQIAER+K
Sbjct: 38  MWRIKRVKATGENSGEAASADESNDALQVTIEKSKKVLAMQQDLLQQIAERRK 90


>ref|XP_004232219.1| PREDICTED: granule-bound starch synthase 2,
           chloroplastic/amyloplastic-like [Solanum lycopersicum]
          Length = 768

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/113 (33%), Positives = 54/113 (47%)
 Frame = +1

Query: 43  VDSSVILHSSNHHSPMVPLLAYRPRKRVEVGAFADCNSAGFSRNLTVDSFSRLSRCNGRR 222
           +++S++LH+ N   P +P  ++RP+K                        SR+   +  +
Sbjct: 1   MENSIVLHTGNQFHPSLPFFSFRPKK-----------------------LSRIHGSSREQ 37

Query: 223 RWTTQHVKAXXXXXXXXXXXXXXXXALQATIEKSKKVLEMQRDLFQQIAERKK 381
            W  + VKA                ALQ TIEKSKKVL MQ+DL QQIAER+K
Sbjct: 38  MWRIKRVKATGENSGEAASADESDDALQVTIEKSKKVLAMQQDLLQQIAERRK 90


>ref|XP_006482606.1| PREDICTED: granule-bound starch synthase 2,
           chloroplastic/amyloplastic-like [Citrus sinensis]
          Length = 769

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 44/112 (39%), Positives = 56/112 (50%)
 Frame = +1

Query: 46  DSSVILHSSNHHSPMVPLLAYRPRKRVEVGAFADCNSAGFSRNLTVDSFSRLSRCNGRRR 225
           DS V+L S N + P     A+RP+K   + AF          N +V  FS  S  +G   
Sbjct: 16  DSYVVLFSKNQYRPSSSFSAFRPKKS-PIFAFL---------NNSVSGFSCRSNKSGHLL 65

Query: 226 WTTQHVKAXXXXXXXXXXXXXXXXALQATIEKSKKVLEMQRDLFQQIAERKK 381
              +HVKA                +LQATIEKSKKVL MQ+ L QQI+ER+K
Sbjct: 66  -KVKHVKATGAGFVEDESGNEPEDSLQATIEKSKKVLAMQKQLLQQISERRK 116


>ref|XP_006431165.1| hypothetical protein CICLE_v10011124mg [Citrus clementina]
           gi|557533222|gb|ESR44405.1| hypothetical protein
           CICLE_v10011124mg [Citrus clementina]
          Length = 769

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 44/112 (39%), Positives = 56/112 (50%)
 Frame = +1

Query: 46  DSSVILHSSNHHSPMVPLLAYRPRKRVEVGAFADCNSAGFSRNLTVDSFSRLSRCNGRRR 225
           DS V+L S N + P     A+RP+K   + AF          N +V  FS  S  +G   
Sbjct: 16  DSYVVLFSKNQYRPSSSFSAFRPKKS-PIFAFL---------NNSVSGFSFRSNKSGHLL 65

Query: 226 WTTQHVKAXXXXXXXXXXXXXXXXALQATIEKSKKVLEMQRDLFQQIAERKK 381
              +HVKA                +LQATIEKSKKVL MQ+ L QQI+ER+K
Sbjct: 66  -KVKHVKATGAGFVEDESGNEPEDSLQATIEKSKKVLAMQKQLLQQISERRK 116


>gb|EOY03481.1| Starch synthase 2 [Theobroma cacao]
          Length = 754

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 40/118 (33%), Positives = 53/118 (44%)
 Frame = +1

Query: 28  SFLAGVDSSVILHSSNHHSPMVPLLAYRPRKRVEVGAFADCNSAGFSRNLTVDSFSRLSR 207
           +++A   S  I+ S   + P+ P   +RPRK   +             N++   FS  S 
Sbjct: 2   AYIASSSSPFIIESKRENRPVFPFSTFRPRKSKSLAVL----------NVSTCGFSLFS- 50

Query: 208 CNGRRRWTTQHVKAXXXXXXXXXXXXXXXXALQATIEKSKKVLEMQRDLFQQIAERKK 381
            N    W  + V+                   QATIEKSKKVL MQRDL QQIAER+K
Sbjct: 51  -NKGLLWRFKPVRVAGSLDGVGGGGDDSEDTFQATIEKSKKVLAMQRDLLQQIAERRK 107


Top