BLASTX nr result
ID: Rehmannia26_contig00021225
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00021225
(1883 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 417 e-177
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 413 e-175
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 416 e-174
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 408 e-171
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 387 e-167
gb|ABG22121.1| polyprotein [Solanum melongena] 531 e-167
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 402 e-166
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 401 e-166
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 401 e-166
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 398 e-165
gb|AFB73911.1| polyprotein [Citrus sinensis] 398 e-165
gb|AFB73912.1| polyprotein [Citrus sinensis] 399 e-164
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 399 e-164
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 378 e-161
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 384 e-158
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 409 e-158
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera] 377 e-157
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 386 e-157
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera] 372 e-156
emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera] 374 e-156
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 417 bits (1072), Expect(2) = e-177
Identities = 208/348 (59%), Positives = 266/348 (76%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
+ RSKYD CVY++ + +GS IYLLLYVDDMLIA++S++EI KLK L+ EF+MKDLG K
Sbjct: 990 FKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAK 1048
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGMEISRDR SG L L+Q Y+KKVLQRF M +N K VSTP+APH KLSA P D
Sbjct: 1049 KILGMEISRDRKSGLLFLSQHNYIKKVLQRFNM-QNAKAVSTPIAPHFKLSAAQCPSIDA 1107
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
E +YM +VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW AV+WI RY+ T
Sbjct: 1108 EIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGT 1167
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
L F G+ + ++GY DSDYA DLD+RRS TGY+FT+ VSW++TLQS VALS
Sbjct: 1168 TYSCLKF---GRTDKGLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALS 1224
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA+ EA KE IWL+ L +L + I++HCDSQSAI+L K+Q+ H RTKHID+
Sbjct: 1225 TTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDI 1284
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINIL 1751
+YHFVR+++EEG + + KI T +NPADM+TK + KF+ C L+ ++
Sbjct: 1285 KYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLVGLI 1332
Score = 232 bits (592), Expect(2) = e-177
Identities = 125/246 (50%), Positives = 155/246 (63%), Gaps = 11/246 (4%)
Frame = +1
Query: 4 PAKNDNPVTEDLSDDD-EEEVQTQEPLDQSE---PIALRRPRREIHKPARFAD------- 150
P + D++DDD ++VQ P+ Q E PIA R+ +R P R +
Sbjct: 744 PVHEQDDHNNDVADDDAHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIEECNLSYY 803
Query: 151 MVANALPVIDDDVPFTFREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGC 330
++ A V + P T++EAVR +SE W AM EEMQSL+KN TW+V LPK KK I C
Sbjct: 804 ALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISC 863
Query: 331 KWVFAKKDGFPNKNDVHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXX 510
KW+F +K+G + YKARLVA+GY+Q G+DYN+VFSPVVKHSSIR
Sbjct: 864 KWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDL 923
Query: 511 XXXXXDVKTAFLHGDLEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDK 690
DVKTAFLHG+LEE+IYM QPEGF V GKE +V KL +SLYGLKQSPRQW KRFD
Sbjct: 924 ELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDS 983
Query: 691 FMMGRS 708
FM+ S
Sbjct: 984 FMLSHS 989
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 413 bits (1062), Expect(2) = e-175
Identities = 206/348 (59%), Positives = 264/348 (75%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
+ RSKYD CVY++ + +GS IYLLLYVDDMLIA++S++EI KLK L+ EF+MKDLG K
Sbjct: 990 FKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAK 1048
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KIL MEISRDR SG L L+Q Y+KKVLQRF M +N K VSTP+APH KLSA P D
Sbjct: 1049 KILVMEISRDRKSGLLFLSQHNYIKKVLQRFNM-QNAKAVSTPIAPHFKLSAAQCPSTDA 1107
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
E +YM +VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW V+WI RY+ T
Sbjct: 1108 EIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGT 1167
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
L F G+ + ++GY DSDYA DLD+RRS TGY+FT+ VSW++TLQS VALS
Sbjct: 1168 TYSCLKF---GRTDKGLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALS 1224
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA+ EA KE IWL+ L +L + I++HCDSQSAI+L K+Q+ H RTKHID+
Sbjct: 1225 TTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDI 1284
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINIL 1751
+YHFVR+++EEG + + KI T +NPADM+TK + KF+ C L+ ++
Sbjct: 1285 KYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLVGLI 1332
Score = 232 bits (592), Expect(2) = e-175
Identities = 125/246 (50%), Positives = 155/246 (63%), Gaps = 11/246 (4%)
Frame = +1
Query: 4 PAKNDNPVTEDLSDDD-EEEVQTQEPLDQSE---PIALRRPRREIHKPARFAD------- 150
P + D++DDD ++VQ P+ Q E PIA R+ +R P R +
Sbjct: 744 PVHEQDDHNNDVADDDAHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIEECNLSYY 803
Query: 151 MVANALPVIDDDVPFTFREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGC 330
++ A V + P T++EAVR +SE W AM EEMQSL+KN TW+V LPK KK I C
Sbjct: 804 ALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISC 863
Query: 331 KWVFAKKDGFPNKNDVHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXX 510
KW+F +K+G + YKARLVA+GY+Q G+DYN+VFSPVVKHSSIR
Sbjct: 864 KWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDL 923
Query: 511 XXXXXDVKTAFLHGDLEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDK 690
DVKTAFLHG+LEE+IYM QPEGF V GKE +V KL +SLYGLKQSPRQW KRFD
Sbjct: 924 ELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDS 983
Query: 691 FMMGRS 708
FM+ S
Sbjct: 984 FMLSHS 989
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 416 bits (1070), Expect(2) = e-174
Identities = 207/348 (59%), Positives = 266/348 (76%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
+ RSKYD CVY++ + +GS IYLLLYVDDMLIA++S++EI KLK L+ EF+MKDLG K
Sbjct: 992 FKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAK 1050
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGMEISRDR SG L L+Q Y+KKVLQRF M +N K VSTP+APH KLSA P D
Sbjct: 1051 KILGMEISRDRKSGLLFLSQHNYIKKVLQRFNM-QNAKAVSTPIAPHFKLSAAQCPSTDA 1109
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
E +YM +VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW A++WI RY+ T
Sbjct: 1110 EIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGT 1169
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
L F G+ + ++GY DSDYA DLD+RRS TGY+FT+ VSW++TLQS VALS
Sbjct: 1170 TYSCLKF---GRTDKGLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALS 1226
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA+ EA KE IWL+ L +L + I++HCDSQSAI+L K+Q+ H RTKHID+
Sbjct: 1227 TTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDI 1286
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINIL 1751
+YHFVR+++EEG + + KI T +NPADM+TK + KF+ C L+ ++
Sbjct: 1287 KYHFVRDVIEEGKLKVCKICTHDNPADMMTKPIPVAKFELCSSLVGLI 1334
Score = 225 bits (574), Expect(2) = e-174
Identities = 123/246 (50%), Positives = 152/246 (61%), Gaps = 11/246 (4%)
Frame = +1
Query: 4 PAKNDNPVTEDLSDDD-EEEVQTQEPLDQSEP---IALRRPRREIHKPARFAD------- 150
P + D++DDD ++VQ P+ Q E IA R+ +R P R +
Sbjct: 746 PVDEQDDHNNDVADDDAHDDVQQTPPILQLEEDLSIAQRKSKRTTKPPKRLIEECNLSYY 805
Query: 151 MVANALPVIDDDVPFTFREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGC 330
++ A V + P T++EAVR +SE W AM EEMQSL+KN TW+V LPK KK I C
Sbjct: 806 ALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISC 865
Query: 331 KWVFAKKDGFPNKNDVHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXX 510
KW+F +K+ YKARLVA+GY+Q G+DYN+VFSPVVKHSSIR
Sbjct: 866 KWIFKRKEALSLSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDL 925
Query: 511 XXXXXDVKTAFLHGDLEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDK 690
DVKTAFLHG+LEE+IYM QPEGF V GKE +V KL +SLYGLKQSPRQW KRFD
Sbjct: 926 ELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDS 985
Query: 691 FMMGRS 708
FM+ S
Sbjct: 986 FMLSHS 991
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 408 bits (1049), Expect(2) = e-171
Identities = 203/339 (59%), Positives = 258/339 (76%), Gaps = 1/339 (0%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
YTR +YD CVY +DG I LLLYVDDMLIA + L+I KLK +L EF+MKDLG +
Sbjct: 955 YTRCQYDCCVYYHVFEDGKVILLLLYVDDMLIACRDMLQIQKLKKKLGAEFDMKDLGAAQ 1014
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILG+EI RDR +GK+ L+Q++Y+ K+L+RF M E K VS PLA H +LSA+ P + +
Sbjct: 1015 KILGIEIRRDRNAGKIWLSQEKYIMKILERFNMAE-AKVVSIPLAAHFRLSAEQRPSDQK 1073
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
E D M VPYA+AVG LMYAM+CTRPD++QA+SVVS+YM +PGK HW AVKWI +Y+ NT
Sbjct: 1074 EIDMMKNVPYASAVGCLMYAMICTRPDLAQAMSVVSKYMSNPGKRHWEAVKWIFKYLKNT 1133
Query: 1248 VDVGLVFEQDGKLGQSIV-GYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVAL 1424
+G++FE+ + G++ V G+ DSD+AGDLD+RRST GY+FT PVSWK+TLQ+ AL
Sbjct: 1134 RQLGIMFER--RQGEACVAGFVDSDFAGDLDRRRSTAGYVFTCGGGPVSWKATLQAVTAL 1191
Query: 1425 STTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHID 1604
STTEAEYMA++EA KEAIWL L LGV Q+ + V CDSQSAIHLAKNQV HARTKHID
Sbjct: 1192 STTEAEYMALTEASKEAIWLNGLAGQLGVHQEGVVVKCDSQSAIHLAKNQVFHARTKHID 1251
Query: 1605 VRYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKF 1721
RYH +R+ +E G I++EK+HT +N AD LTK V+ K+
Sbjct: 1252 ARYHRIRDWVEAGVIIVEKVHTDDNAADFLTKPVSVEKY 1290
Score = 224 bits (571), Expect(2) = e-171
Identities = 115/214 (53%), Positives = 142/214 (66%), Gaps = 4/214 (1%)
Frame = +1
Query: 70 QEPLDQSEPIALRRPRREIHKPARFA----DMVANALPVIDDDVPFTFREAVRSPESEKW 237
Q P IAL +P+R RF + V+ AL + D P T+ +A+ S ES W
Sbjct: 739 QAPESFKRSIALDKPKRNRKPIQRFGFEPEEDVSRALSISQGD-PTTYEDAIESVESAGW 797
Query: 238 KGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFAKKDGFPNKNDVHYKARLVAKGYAQ 417
GAM EEM+SL KN W++ PK +K +GCKWVF KK+G + + YKARLVAKGY+Q
Sbjct: 798 IGAMTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQ 857
Query: 418 KEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGDLEEEIYMTQPEGFK 597
KEG+DY+E+FSPVVKH+SIR+ DVKTAFLHGDLEE+IYM+QPEGF
Sbjct: 858 KEGVDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFV 917
Query: 598 VAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMM 699
GKEN V +L KSLYGLKQSPRQWYK FD +M+
Sbjct: 918 ETGKENLVCRLKKSLYGLKQSPRQWYKPFDTYML 951
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 387 bits (993), Expect(2) = e-167
Identities = 193/316 (61%), Positives = 245/316 (77%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
+ RSKYD CVY++ + +GS IYLLLYVDDMLIA++S++EI KLK L+ EF+MKDLG K
Sbjct: 990 FKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAK 1048
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGMEISRDR SG L L+Q Y+KKVLQRF M +N K VSTP+APH KLSA P D
Sbjct: 1049 KILGMEISRDRKSGLLFLSQHNYIKKVLQRFNM-QNAKAVSTPIAPHFKLSAAQCPSIDA 1107
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
E +YM +VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW AV+WI RY+ T
Sbjct: 1108 EIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGT 1167
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
L F G+ + ++GY DSDYA DLD+RRS TGY+FT+ VSW++TLQS VALS
Sbjct: 1168 TYSCLKF---GRTDKGLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALS 1224
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA+ EA KE IWL+ L +L + I++HCDS+SAI+L K+Q+ H RTKHID+
Sbjct: 1225 TTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSESAIYLTKDQMFHERTKHIDI 1284
Query: 1608 RYHFVREILEEGNILL 1655
+YHFVR+++EE + L+
Sbjct: 1285 KYHFVRDVIEEDDWLI 1300
Score = 232 bits (592), Expect(2) = e-167
Identities = 125/246 (50%), Positives = 155/246 (63%), Gaps = 11/246 (4%)
Frame = +1
Query: 4 PAKNDNPVTEDLSDDD-EEEVQTQEPLDQSE---PIALRRPRREIHKPARFAD------- 150
P + D++DDD ++VQ P+ Q E PIA R+ +R P R +
Sbjct: 744 PVHEQDDHNNDVADDDAHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIEECNLSYY 803
Query: 151 MVANALPVIDDDVPFTFREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGC 330
++ A V + P T++EAVR +SE W AM EEMQSL+KN TW+V LPK KK I C
Sbjct: 804 ALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISC 863
Query: 331 KWVFAKKDGFPNKNDVHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXX 510
KW+F +K+G + YKARLVA+GY+Q G+DYN+VFSPVVKHSSIR
Sbjct: 864 KWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDL 923
Query: 511 XXXXXDVKTAFLHGDLEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDK 690
DVKTAFLHG+LEE+IYM QPEGF V GKE +V KL +SLYGLKQSPRQW KRFD
Sbjct: 924 ELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDS 983
Query: 691 FMMGRS 708
FM+ S
Sbjct: 984 FMLSHS 989
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 531 bits (1368), Expect(2) = e-167
Identities = 258/302 (85%), Positives = 280/302 (92%)
Frame = +3
Query: 705 KYTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGET 884
+YTRSKYDHCVY KLQ+GS++YLLLYVDDMLIA++SQ EID+LKAQL++EFEMKDLGE
Sbjct: 60 RYTRSKYDHCVYFHKLQNGSYVYLLLYVDDMLIAAKSQFEIDRLKAQLSKEFEMKDLGEA 119
Query: 885 KKILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKND 1064
KKILGMEISRDR GKLCLTQKQYLKKVLQRFG+ +++KPVSTPLAPHLKLS+QLSPK D
Sbjct: 120 KKILGMEISRDRQRGKLCLTQKQYLKKVLQRFGINDDSKPVSTPLAPHLKLSSQLSPKTD 179
Query: 1065 EERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILN 1244
EER+YM KVPYANAVGSLMYAMVCTR DISQAVSVVSRYMHDPGKGHW AVKWILRYI N
Sbjct: 180 EEREYMAKVPYANAVGSLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKN 239
Query: 1245 TVDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVAL 1424
TVD+GLVFEQD LG +VGYCDSDYAGDLDKRRSTTGYLFTLAK PVSWKSTLQ+TVAL
Sbjct: 240 TVDIGLVFEQDKSLGSCVVGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVAL 299
Query: 1425 STTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHID 1604
STTEAEYMA++EAVKEAIWL LLE+LGVGQKH+ VH DSQSAIHLAKNQV HARTKHID
Sbjct: 300 STTEAEYMAITEAVKEAIWLHGLLEELGVGQKHLMVHSDSQSAIHLAKNQVFHARTKHID 359
Query: 1605 VR 1610
VR
Sbjct: 360 VR 361
Score = 85.9 bits (211), Expect(2) = e-167
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +1
Query: 526 DVKTAFLHGDLEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFM 696
DVKTAF HGDL+EEIY +G KVA KENWV KL KSLY +KQS RQWYK+FDKFM
Sbjct: 1 DVKTAFFHGDLKEEIYYDFSQGIKVASKENWVCKLNKSLY-MKQSSRQWYKQFDKFM 56
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 402 bits (1033), Expect(2) = e-166
Identities = 201/348 (57%), Positives = 260/348 (74%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y+R DHC Y ++ FI LLLYVDDML+ ++ + +LKAQL +EF+MKDLG
Sbjct: 960 YSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPAN 1019
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGM+I RDR K+ L+QK YL+KVL+RF M ++ KP+STPL + KLS+ +SP N+
Sbjct: 1020 KILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM-QDCKPISTPLPVNFKLSSGMSPSNEA 1078
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ER M +VPYA+AVGSLMYAM+CTRPDI+QAV VVSR+M DPGK HW+AVK I+RYI T
Sbjct: 1079 ERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGT 1138
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
V + F G ++ GY DSD+AGD DKR+STTGY+FTLA VSW S LQ+ VALS
Sbjct: 1139 SGVAVCF---GGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALS 1195
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA ++A KEAIW+Q L+E+LG Q+ ITV+CDSQSA+H+A+N H+RTKHI V
Sbjct: 1196 TTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGV 1255
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINIL 1751
+YHFVRE++EEG++ ++KIHT +N AD +TK + + KF C L +L
Sbjct: 1256 QYHFVREVVEEGSVDMQKIHTNDNLADAMTKSINTDKFIWCRSLYGLL 1303
Score = 213 bits (542), Expect(2) = e-166
Identities = 115/227 (50%), Positives = 150/227 (66%), Gaps = 7/227 (3%)
Frame = +1
Query: 40 SDDDEEEV--QTQEPLDQSEPIALRRPRREIHKPARFADMVANALP----VIDDDVPFTF 201
SD E E + QEP D + + RR R+ KP+ +D V + + ++ P TF
Sbjct: 734 SDSSEAEPVHEEQEPDDVNNGV--RRSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTF 791
Query: 202 REAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFA-KKDGFPNKNDV 378
EA+ ++ +W AM EEM++L +NKTW++ +LPKG+KAIG KWV+ K+DG N
Sbjct: 792 HEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDG--NDQVE 849
Query: 379 HYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGDL 558
Y+ARLV KGYAQKEGID+NE+FSPVV+ ++IR+ DVKTAFLHG+L
Sbjct: 850 RYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGEL 909
Query: 559 EEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMM 699
EEEIYM QPEGFK GKEN V +L KSLYGLKQ+PR WYKRFD F++
Sbjct: 910 EEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFII 956
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 401 bits (1030), Expect(2) = e-166
Identities = 199/341 (58%), Positives = 257/341 (75%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y R DHC Y ++ FI LLLYVDDML+ ++ + +LKAQL +EF+MKDLG
Sbjct: 960 YNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPAN 1019
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGM+I RDR K+ L+QK YL+KVL+RF M ++ KP+STPL + KLS+ +SP N+
Sbjct: 1020 KILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM-QDCKPISTPLPVNFKLSSGMSPSNEA 1078
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ER M +VPYA+AVGSLMYAM+CTRPDI+QAV VVSR+M DPGK HW+AVK I+RYI T
Sbjct: 1079 ERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGT 1138
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
V + F G ++ GY DSD+AGD DKR+STTGY+FTLA VSW S LQ+ VALS
Sbjct: 1139 SGVAVCF---GGSELTVWGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALS 1195
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA ++A KEAIW+Q L+E+LG Q+ ITV+CDSQSA+H+A+N H+RTKHI V
Sbjct: 1196 TTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGV 1255
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHC 1730
+YHFVRE++EEG++ ++KIHT +N AD++TK + + KF C
Sbjct: 1256 QYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINTDKFVWC 1296
Score = 214 bits (545), Expect(2) = e-166
Identities = 114/228 (50%), Positives = 151/228 (66%), Gaps = 5/228 (2%)
Frame = +1
Query: 31 EDLSDDDEEEVQTQEPLDQSEPIALRRPRREIHKPARFADMVANALP----VIDDDVPFT 198
E S + E + QEP D ++ + RR R+ KP+ +D V + + ++ P T
Sbjct: 733 ESDSSEAESVHEEQEPDDVNDGV--RRSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPST 790
Query: 199 FREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFA-KKDGFPNKND 375
F EA+ ++ +W AM EEM++L +NKTW++ +LPKG+KAIG KWV+ K+DG N
Sbjct: 791 FHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDG--NDQV 848
Query: 376 VHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGD 555
Y+ARLV KGYAQKEGID+NE+FSPVV+ ++IR+ DVKTAFLHG+
Sbjct: 849 ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGE 908
Query: 556 LEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMM 699
LEEEIYM QPEGFK GKEN V +L KSLYGLKQ+PR WYKRFD F++
Sbjct: 909 LEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFII 956
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 401 bits (1030), Expect(2) = e-166
Identities = 199/341 (58%), Positives = 258/341 (75%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y+R DHC Y ++ FI LLLYVDDML+ ++ + +LKAQL +EF+MKDLG
Sbjct: 960 YSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPAN 1019
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGM+I RDR K+ L+QK YL+KVL+RF M ++ KP+STPL + KLS+ +SP N+
Sbjct: 1020 KILGMQIHRDRKDMKIWLSQKNYLRKVLRRFNM-QDCKPISTPLPVNFKLSSGMSPSNEA 1078
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ER M +VPYA+AVGSLMYAM+CTRPDI+QAV VVSR+M DPGK HW+AVK I+RYI T
Sbjct: 1079 ERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGT 1138
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
V + F G ++ GY DSD+AGD DKR+STTGY+FTLA VSW S LQ+ VALS
Sbjct: 1139 SGVAVCF---GGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALS 1195
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA ++A KEAIW+Q L+E+LG Q+ ITV+CDSQSA+H+A+N H+RTKHI V
Sbjct: 1196 TTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGV 1255
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHC 1730
+YHFVRE++EEG++ ++KIHT +N AD++TK + + KF C
Sbjct: 1256 QYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINADKFVWC 1296
Score = 214 bits (545), Expect(2) = e-166
Identities = 114/228 (50%), Positives = 151/228 (66%), Gaps = 5/228 (2%)
Frame = +1
Query: 31 EDLSDDDEEEVQTQEPLDQSEPIALRRPRREIHKPARFADMVANALP----VIDDDVPFT 198
E S + E + QEP D ++ + RR R+ KP+ +D V + + ++ P T
Sbjct: 733 ESDSSEAESVHEEQEPDDVNDGV--RRSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPST 790
Query: 199 FREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFA-KKDGFPNKND 375
F EA+ ++ +W AM EEM++L +NKTW++ +LPKG+KAIG KWV+ K+DG N
Sbjct: 791 FHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDG--NDQV 848
Query: 376 VHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGD 555
Y+ARLV KGYAQKEGID+NE+FSPVV+ ++IR+ DVKTAFLHG+
Sbjct: 849 ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGE 908
Query: 556 LEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMM 699
LEEEIYM QPEGFK GKEN V +L KSLYGLKQ+PR WYKRFD F++
Sbjct: 909 LEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFII 956
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 398 bits (1022), Expect(2) = e-165
Identities = 197/341 (57%), Positives = 256/341 (75%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y R DHC Y ++ FI LLLYVDD+L+ ++ + +LKAQL +EF+MKDLG
Sbjct: 960 YNRLSSDHCTYYKRFDGNDFIILLLYVDDILVVGPNKDRVQELKAQLAREFDMKDLGPAN 1019
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGM+I RDR K+ L+QK YL+KVL+RF M ++ KP+STPL + KLS+ +SP N+
Sbjct: 1020 KILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM-QDCKPISTPLPVNFKLSSGMSPSNEA 1078
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ER M +VPYA+AVGSLMYAM+CTRPDI+QAV VVSR+M DPGK HW+AVK I+RYI T
Sbjct: 1079 ERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGT 1138
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
V + F G ++ GY DSD+AGD DKR+STTGY+FTL VSW S LQ+ VALS
Sbjct: 1139 SGVAVCF---GGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLTGGAVSWLSKLQTVVALS 1195
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA ++A KEAIW+Q L+E+LG Q+ ITV+CDSQSA+H+A+N H+RTKHI V
Sbjct: 1196 TTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGV 1255
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHC 1730
+YHFVRE++EEG++ ++KIHT +N AD++TK + + KF C
Sbjct: 1256 QYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINADKFVWC 1296
Score = 213 bits (542), Expect(2) = e-165
Identities = 114/228 (50%), Positives = 150/228 (65%), Gaps = 5/228 (2%)
Frame = +1
Query: 31 EDLSDDDEEEVQTQEPLDQSEPIALRRPRREIHKPARFADMVANALP----VIDDDVPFT 198
E S + E + QEP D + + RR R+ KP+ +D V + ++ P T
Sbjct: 733 ESDSSEAESVHEEQEPDDVNNGV--RRSTRQTQKPSWQSDYVMTGHDAYCLIAEEGEPST 790
Query: 199 FREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFA-KKDGFPNKND 375
F EA+ ++ +W A+ EEM++L+KNKTW++ +LPKG+KAIG KWV+ K+DG N
Sbjct: 791 FHEALNGSDASQWMTAIHEEMEALRKNKTWELVELPKGRKAIGNKWVYKIKRDG--NDQV 848
Query: 376 VHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGD 555
Y+ARLV KGYAQKEGID+NE+FSPVV+ ++IR+ DVKTAFLHG+
Sbjct: 849 ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGE 908
Query: 556 LEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMM 699
LEEEIYM QPEGFK GKEN V +L KSLYGLKQ+PR WYKRFD F++
Sbjct: 909 LEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFII 956
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 398 bits (1022), Expect(2) = e-165
Identities = 202/338 (59%), Positives = 256/338 (75%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y R DHC Y ++ +D FI LLLYVDDML+A ++ I +LKAQL +EFEMKDLG
Sbjct: 964 YNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAREFEMKDLGPAN 1023
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGM+I RDR + K+ L+QK YLKK+L+RF M ++ K +ST L + KLS+ + P N+
Sbjct: 1024 KILGMQIHRDRNNMKIWLSQKNYLKKILRRFNM-QDCKSISTSLPVNFKLSSSMCPSNEA 1082
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ER M +VPYA+AVGSLM+AM+CTRPDI+QAV VVSRYM +PG HW AVK ILRYI T
Sbjct: 1083 ERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGT 1142
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
DV L + G ++ GY DSD+AGDLDKR+STTGY+FTLA A VSW S LQ+ VALS
Sbjct: 1143 SDVALCY---GGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALS 1199
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA ++A K+AIW+Q LLE+LG Q+ I V CDSQSA+H+A+N H+RTKHI V
Sbjct: 1200 TTEAEYMAATQACKKAIWIQRLLEELGHKQQKILVFCDSQSALHIARNPAFHSRTKHIGV 1259
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKF 1721
+YHFVRE++E+G++ L+KIHT EN AD+LTK + + KF
Sbjct: 1260 QYHFVREVVEDGSVDLQKIHTKENLADVLTKPINTDKF 1297
Score = 212 bits (540), Expect(2) = e-165
Identities = 116/233 (49%), Positives = 149/233 (63%), Gaps = 5/233 (2%)
Frame = +1
Query: 16 DNPVTEDLSDDDEEEVQTQEPLDQSEPIALRRPRREIHKPARFADMVANA----LPVIDD 183
+NP D S+ E + QEP++ P +RR RE P ++ V + +D
Sbjct: 732 NNPENSDSSEAAPEH-EEQEPVESEAP-EVRRSTRERRPPTWHSEYVTEINVAYCLLTED 789
Query: 184 DVPFTFREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFA-KKDGF 360
P TF EA+ S + W AM+EE+++L KNKTW++ LP+G+KAIG KWV+ K+DG
Sbjct: 790 GEPSTFHEALNSSDVALWMTAMQEEIEALHKNKTWELVPLPRGRKAIGNKWVYKIKRDG- 848
Query: 361 PNKNDVHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTA 540
N Y+ARLV KGYAQKEGID+NE+FSPVV+ +++RI DVKTA
Sbjct: 849 -NDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTA 907
Query: 541 FLHGDLEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMM 699
FLHG+LEEEIYM QPEGF GKEN V +L KSLYGLKQ+PR WYKRFD F+M
Sbjct: 908 FLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRYWYKRFDSFIM 960
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 399 bits (1026), Expect(2) = e-164
Identities = 202/338 (59%), Positives = 256/338 (75%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y R DHC Y ++ +D FI LLLYVDDML+A ++ I +LKAQL +EFEMKDLG
Sbjct: 964 YNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAREFEMKDLGPAN 1023
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGM+I RDR + K+ L+QK YLKK+L+RF M ++ K +STPL + KLS+ + P N+
Sbjct: 1024 KILGMQIHRDRNNRKIWLSQKNYLKKILRRFNM-QDCKSISTPLPVNFKLSSSMCPSNEA 1082
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ER M +VPYA+AVGSLM+AM+CTRPDI+QAV VSRYM +PG HW AVK ILRYI T
Sbjct: 1083 ERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYIRGT 1142
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
+V L + G ++ GY DSD+AGDLDKR+STTGY+FTLA A VSW S LQ+ VALS
Sbjct: 1143 SNVALCY---GGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALS 1199
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA ++A KEAIW+Q LLE+LG Q+ I V CDSQSA+H+A+N H+RTKHI V
Sbjct: 1200 TTEAEYMAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQSALHIARNPAFHSRTKHIGV 1259
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKF 1721
+YHFVRE++E+G++ L+KIHT EN AD+LTK + + KF
Sbjct: 1260 QYHFVREVVEDGSVDLQKIHTKENLADVLTKSINTDKF 1297
Score = 209 bits (533), Expect(2) = e-164
Identities = 116/233 (49%), Positives = 148/233 (63%), Gaps = 5/233 (2%)
Frame = +1
Query: 16 DNPVTEDLSDDDEEEVQTQEPLDQSEPIALRRPRREIHKPARFADMVANA----LPVIDD 183
+NP D S+ E + QEP++ P +RR RE P ++ V + +D
Sbjct: 732 NNPENSDSSEAAPEH-EEQEPVESEAP-EVRRSTRERRPPTWHSEYVTEINVAYCLLTED 789
Query: 184 DVPFTFREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFA-KKDGF 360
P TF EA+ S + W AM+EE+++L KNKTW++ LP G+KAIG KWV+ K+DG
Sbjct: 790 GEPSTFHEALNSLDVALWMTAMQEEIEALHKNKTWELVPLPHGRKAIGNKWVYKIKRDG- 848
Query: 361 PNKNDVHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTA 540
N Y+ARLV KGYAQKEGID+NE+FSPVV+ +++RI DVKTA
Sbjct: 849 -NDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTA 907
Query: 541 FLHGDLEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMM 699
FLHG+LEEEIYM QPEGF GKEN V +L KSLYGLKQ+PR WYKRFD F+M
Sbjct: 908 FLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIM 960
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 399 bits (1024), Expect(2) = e-164
Identities = 201/341 (58%), Positives = 254/341 (74%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y R DHC Y ++ DG FI LLLYVDDML+ ++ + +LKAQL +EF+MKDLG
Sbjct: 960 YNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPAN 1019
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGM+I RDR K+ L+QK YL+KVL+RF M ++ P+STPL + KLS+ + P ++
Sbjct: 1020 KILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNM-QDYNPISTPLPVNYKLSSSMIPSSEA 1078
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ER M +VPYA+AVGSLMYAM+CTRPDI+QAV VSR+M DPGK HW+AVK ILRYI T
Sbjct: 1079 ERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGT 1138
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
L F G +I GY DSD+AGDLDKR+STTGY+FTLA VSW S LQ+ VALS
Sbjct: 1139 SGAALCF---GGSEFTIRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALS 1195
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEYMA ++A KEAIW Q LLE+LG Q+ ITV+CDS SA+H+A+N H+RTKHI V
Sbjct: 1196 TTEAEYMAATQACKEAIWTQRLLEELGHKQQKITVYCDSPSALHIARNPAFHSRTKHIGV 1255
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHC 1730
+YHFVRE++EEG++ ++KIHT +N AD++TK + S KF C
Sbjct: 1256 QYHFVREVVEEGSVNMQKIHTKDNLADVMTKPINSDKFIWC 1296
Score = 210 bits (535), Expect(2) = e-164
Identities = 113/228 (49%), Positives = 148/228 (64%), Gaps = 5/228 (2%)
Frame = +1
Query: 31 EDLSDDDEEEVQTQEPLDQSEPIALRRPRREIHKPARFADMVANALPVI----DDDVPFT 198
E+ + E E Q ++ +EP RR R+I KP+ ++ V + +D P T
Sbjct: 734 ENSEAEPEHEEQEPNEVNDAEP---RRTTRQIRKPSWHSEYVMASHDAYCLLSEDGEPST 790
Query: 199 FREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFA-KKDGFPNKND 375
F EAV ++ W AM+EE+++L +N TW++ +LPKG+KAIG KWVF K+DG N
Sbjct: 791 FHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVFKIKRDG--NDQV 848
Query: 376 VHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGD 555
Y+ARLV KGYAQKEGID+NE+FSPVV+ ++IRI DVKTAFLHG+
Sbjct: 849 ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLDVKTAFLHGE 908
Query: 556 LEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMM 699
LEEEIYM QPEGF+ +EN V +L KSLYGLKQ+PR WYKRFD F+M
Sbjct: 909 LEEEIYMLQPEGFEEKERENLVCRLTKSLYGLKQAPRCWYKRFDSFIM 956
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 378 bits (970), Expect(2) = e-161
Identities = 190/348 (54%), Positives = 255/348 (73%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y RS+YD CVY G YLLLYVDDMLIAS+ + EI++LK L EFEMKDLG K
Sbjct: 987 YRRSRYDSCVYFGGSDQGGVAYLLLYVDDMLIASKYKSEIERLKNLLKAEFEMKDLGNAK 1046
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
+ILGM+I RDR++G L L+Q +Y+KKVL+RF M ++ KPV TPL P KLSA + E
Sbjct: 1047 RILGMDIIRDRSAGTLFLSQGKYIKKVLERFEM-QDCKPVQTPLGPQFKLSAATT---SE 1102
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
+ M++ PYA AVGSLMYAMVCTR DI+ AVSVVSRY+ PGK HW+AVKWI+RY+ +
Sbjct: 1103 DESQMNEFPYAQAVGSLMYAMVCTRSDIAYAVSVVSRYLSCPGKVHWNAVKWIMRYLKGS 1162
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
GL++ + ++G+ DSD+AGDLD+R+ST+ Y+F L +SWKS+LQS ALS
Sbjct: 1163 STCGLLYGKTKSDKIEVMGFVDSDFAGDLDRRKSTSRYMFVLNSCLISWKSSLQSGGALS 1222
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
+TEAE++A +EAVKEA+WL+ LL +L + QK + V CD+Q+AIHL KNQ+ H RTKHIDV
Sbjct: 1223 STEAEFIATTEAVKEAMWLRGLLNELWLNQKIVQVFCDNQNAIHLVKNQMYHERTKHIDV 1282
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINIL 1751
+ F+R+ + +G +++ KIHT+ NPAD LTK + + KF+ C+ L+ I+
Sbjct: 1283 KLQFIRDEVGKGTVVVSKIHTSVNPADALTKSLPTAKFEFCVNLMGIM 1330
Score = 219 bits (558), Expect(2) = e-161
Identities = 112/228 (49%), Positives = 150/228 (65%), Gaps = 6/228 (2%)
Frame = +1
Query: 40 SDDDEEEVQTQEPLD-QSEPIALRRPRREIHKPARF--ADMVANALPVIDD---DVPFTF 201
++ +E EV D Q+ +A R RRE+ P R+ AD++A AL D+ + P F
Sbjct: 758 AESEEHEVSELPQADLQNYQLARDRVRREVRAPVRYGYADLIAYALLCADEVTIEEPANF 817
Query: 202 REAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFAKKDGFPNKNDVH 381
EA+ S +KW AM++EM+SLQ+N+TW + P K+ I CKW+F + +G P+
Sbjct: 818 SEAMESVHCDKWLEAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPK 877
Query: 382 YKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGDLE 561
YKARLVA+G+ Q+EG+D+NE+FSPVVKHSSIRI DVKTAFLHG+LE
Sbjct: 878 YKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLE 937
Query: 562 EEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMMGR 705
E+I M QPEGF+ KE++V L KSLYGLKQSPRQWY+RFD FM+ +
Sbjct: 938 EQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSK 985
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 384 bits (985), Expect(2) = e-158
Identities = 194/347 (55%), Positives = 256/347 (73%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y ++ D CVY ++ + +FI LLLYVDDMLI + + I KLK L++ F+MKDLG +
Sbjct: 983 YLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQ 1042
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
+ILGM+I R+RTS KL L+Q++Y+++VL+RF M +N KPVSTPLA HLKLS ++ P E
Sbjct: 1043 QILGMKIVRERTSRKLWLSQEKYIERVLERFNM-KNAKPVSTPLAGHLKLSKKMCPTTVE 1101
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
E+ M KVPY++AVGSLMYAMVCTRPDI+ AV VVSR++ +PGK HW AVKWILRY+ T
Sbjct: 1102 EKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGT 1161
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
L F G + GY D+D AGD+D R+S+TGYLFT + +SW+S LQ VALS
Sbjct: 1162 TGDCLCF---GGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALS 1218
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEY+A +E KE IWL+ L++LG+ QK V+CDSQSAI L+KN + HARTKHIDV
Sbjct: 1219 TTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDV 1278
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINI 1748
RYH++RE++++ ++ + KI T ENPADMLTKVV KF+ C L+ +
Sbjct: 1279 RYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325
Score = 205 bits (522), Expect(2) = e-158
Identities = 118/255 (46%), Positives = 162/255 (63%), Gaps = 19/255 (7%)
Frame = +1
Query: 1 IPAKNDNPVTEDLSDDD--EEEVQTQEPLDQSEPI-----ALRRPRR--EIHKPARFAD- 150
IP+ ++NP + + + D+ E+ Q E ++Q E + + P + E H+P R ++
Sbjct: 730 IPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSER 789
Query: 151 --MVANALP------VIDDDVPFTFREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLP 306
+ + P + DD P + +E + PE + AM+EEM+SLQKN T+K+ +LP
Sbjct: 790 PRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELP 849
Query: 307 KGKKAIGCKWVFA-KKDGFPNKNDVHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIX 483
KGK+ + CKWVF KKDG + V YKARLV KG+ QK+GID++E+FSPVVK +SIR
Sbjct: 850 KGKRPLKCKWVFKLKKDG--DCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTI 907
Query: 484 XXXXXXXXXXXXXXDVKTAFLHGDLEEEIYMTQPEGFKVAGKENWVYKLIKSLYGLKQSP 663
DVKTAFLHGDLEEEIYM QPEGF+VAGK++ V KL KSLYGLKQ+P
Sbjct: 908 LSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAP 967
Query: 664 RQWYKRFDKFMMGRS 708
RQWY +FD FM ++
Sbjct: 968 RQWYMKFDSFMKSQT 982
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 409 bits (1050), Expect(2) = e-158
Identities = 207/351 (58%), Positives = 264/351 (75%)
Frame = +3
Query: 696 DGAKYTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDL 875
+ K+ RS YD CVY K+ DGS IYLLLYVDDMLIA++ + EI KLKAQL+ EFEMKDL
Sbjct: 791 ENLKFRRSNYDSCVY-PKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDL 849
Query: 876 GETKKILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSP 1055
G KKILG+EI+++R SGKL L+QK Y++KVL+RF M + KPVSTPLA H +LS+ L P
Sbjct: 850 GAAKKILGIEITKERHSGKLYLSQKGYIEKVLRRFNM-HDAKPVSTPLAAHFRLSSDLCP 908
Query: 1056 KNDEERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRY 1235
++D + +YM +VPY++ VGSLMYAMVC+RPD+S A+SVVSRYM +PGK HW AV+WI RY
Sbjct: 909 QSDYDIEYMSRVPYSSVVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRY 968
Query: 1236 ILNTVDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQST 1415
+ T L F G+ +VGY DSD+AGDLD+RRS GY+FT+ VSWK+ LQ+T
Sbjct: 969 LCGTSSACLQF---GRSRDGLVGYVDSDFAGDLDRRRSLAGYVFTIGGCAVSWKANLQAT 1025
Query: 1416 VALSTTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTK 1595
VALSTTEAEYMA+SEA KE IWL+ L +L I + CDSQSAI L K+Q+ H RTK
Sbjct: 1026 VALSTTEAEYMAISEACKETIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTK 1085
Query: 1596 HIDVRYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINI 1748
HIDVRYHF+R ++ EG++ + KI T +NPADM+TK V + KF+ C L+ +
Sbjct: 1086 HIDVRYHFIRSVITEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLVGV 1136
Score = 178 bits (452), Expect(2) = e-158
Identities = 97/212 (45%), Positives = 128/212 (60%), Gaps = 7/212 (3%)
Frame = +1
Query: 13 NDNPVTEDLSDDDEEEVQTQEPLDQSEPIALRRPRREIHKPARF---ADMVANALPVIDD 183
+D P T + E+ Q P IA +P+R P R+ A++VA AL V ++
Sbjct: 588 HDKPSTNVPIESQEKASVQQSP---KHSIAKDKPKRNTRPPQRYIEEANIVAYALSVAEE 644
Query: 184 ----DVPFTFREAVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFAKK 351
P T+ EA+ S + +W AM +EM SL+KN TWK+ +LPK KK I CKW+F +K
Sbjct: 645 IEGNAEPSTYSEAIVSDDCNRWITAMHDEMDSLEKNHTWKLVKLPKEKKLIHCKWIFKRK 704
Query: 352 DGFPNKNDVHYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDV 531
+G ++ YKA LVAKGY+Q GID+N+VFSPVVKHSSIR DV
Sbjct: 705 EGMSPTDEARYKAMLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELDQMDV 764
Query: 532 KTAFLHGDLEEEIYMTQPEGFKVAGKENWVYK 627
KTAFLHG+LEE+IYM QPEGF + GKEN ++
Sbjct: 765 KTAFLHGELEEDIYMEQPEGFVIPGKENLKFR 796
>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
Length = 1222
Score = 377 bits (969), Expect(2) = e-157
Identities = 193/348 (55%), Positives = 246/348 (70%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
+ R + DHC Y++ D S+I LLLYVDDMLI +I+ LK QL+++F MKDLG K
Sbjct: 879 FKRCEADHCCYVKSF-DNSYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAK 937
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
+ILGM I RD+ +G L L+Q +Y+KKVL RF M E KPVSTPL H KLS + SPK +E
Sbjct: 938 QILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNE-AKPVSTPLGSHFKLSKEQSPKTEE 996
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ERD+M KVPYA+A+GSLMYAMVCTRPDI+ AV VVSR+M PGK HW AVKWILRY+ +
Sbjct: 997 ERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGS 1056
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
+D L F + GY D+D+AGD+D R+STTG++FTL +SW S LQ V LS
Sbjct: 1057 LDTCLCFTG---ASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLS 1113
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEY+A +EA KE IWL L++LG Q+ +H DSQSAI LAKN H+++KHI
Sbjct: 1114 TTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQSAIFLAKNSAFHSKSKHIQT 1173
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINIL 1751
+YHF+R ++E+ ++LEKI ++NPADMLTK VT K K C I +L
Sbjct: 1174 KYHFIRYLVEDKLVILEKICGSKNPADMLTKGVTIEKLKLCAPSIGLL 1221
Score = 207 bits (526), Expect(2) = e-157
Identities = 112/219 (51%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Frame = +1
Query: 43 DDDEEEVQTQEPLDQSEPIA-LRRPRREIHKPARFADMVANALPVIDDDVPFTFREAVRS 219
++D+E V +Q +D S P+ +RR R P R++ V N L + D P + EA++
Sbjct: 661 EEDKENVNSQ--VDLSTPVVEVRRSSRNTRPPQRYSP-VLNYLLLTDGGEPECYDEALQD 717
Query: 220 PESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFAKKDGFPNKNDVHYKARLV 399
S KW+ AM++EM SL N+TW++T+LP GKKA+ KWV+ K+ + YKARLV
Sbjct: 718 ENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVYRIKN--EHDGSKRYKARLV 775
Query: 400 AKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGDLEEEIYMT 579
KG+ QKEGIDY E+FSPVVK S+IR+ DVKTAFLHGDLEE++YM
Sbjct: 776 VKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMI 835
Query: 580 QPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFM 696
QPEGF V G+EN V KL KSLYGLKQ+PRQWYK+FD FM
Sbjct: 836 QPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFM 874
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 386 bits (991), Expect(2) = e-157
Identities = 196/341 (57%), Positives = 252/341 (73%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
Y R D C Y ++ +F+ LLLYVDDML+A ++ ID+LKAQL +EFEMKDLG
Sbjct: 953 YNRLNADPCAYFKRFGKDNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPAN 1012
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
KILGM+I RDR + K+ L+QK YLKK+L RF M ++ K +STPL +LK+S+ +SP N+E
Sbjct: 1013 KILGMQIHRDRGNRKIWLSQKNYLKKILSRFSM-QDCKSISTPLPINLKVSSSMSPSNEE 1071
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
R M +VPYA+AVGSLM+AM+CTRPDI+QAV VVSRYM +PG+ HW+ VK ILRYI T
Sbjct: 1072 GRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGT 1131
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
DV L + G I GY DSDYAGDLDK +STTGY+F +A VSW S LQ+ VA S
Sbjct: 1132 SDVALCY---GGSDFIINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATS 1188
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEY+A ++A KEAIWL+ LLE+LG Q+ +++ CDSQSA+HLA+N H+RTKHI V
Sbjct: 1189 TTEAEYVAATQASKEAIWLKMLLEELGHKQEFVSLFCDSQSALHLARNPAFHSRTKHIRV 1248
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHC 1730
+YHF+RE ++EG + L+KIHT +N AD LTK++ KF C
Sbjct: 1249 QYHFIREKVKEGTVDLQKIHTADNVADFLTKIINVDKFTWC 1289
Score = 197 bits (502), Expect(2) = e-157
Identities = 106/224 (47%), Positives = 140/224 (62%), Gaps = 5/224 (2%)
Frame = +1
Query: 43 DDDEEEVQTQEPLDQSEPI-ALRRPRREIHKPARFADMVANA----LPVIDDDVPFTFRE 207
D E E +EP +S R+ RE +P +D V + +D P TF+E
Sbjct: 727 DSSEAEPAHEEPEPESSGAPTTRQSDREKRRPTWHSDYVMEGNVAYCLLTEDGEPSTFQE 786
Query: 208 AVRSPESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFAKKDGFPNKNDVHYK 387
A+ S + +W AM+EE+++L KN TW + LP+G+K IG KWVF K ++ + Y+
Sbjct: 787 AINSSDVSQWTAAMQEEIEALHKNNTWDLVPLPQGRKPIGNKWVFKIKRNGDDQVE-RYR 845
Query: 388 ARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGDLEEE 567
ARLV KGYAQKEGID+NE+FSPVV+ +++R+ DVKTAFLHGDLEEE
Sbjct: 846 ARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNLHLEQLDVKTAFLHGDLEEE 905
Query: 568 IYMTQPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFMM 699
IYM QPEGF+ +N V +L KSLYGLKQ+PR WYKRFD F+M
Sbjct: 906 IYMLQPEGFEDKENQNLVCRLNKSLYGLKQAPRCWYKRFDSFIM 949
>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
Length = 1211
Score = 372 bits (954), Expect(2) = e-156
Identities = 191/348 (54%), Positives = 245/348 (70%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
+ R + DHC Y + D S+I LLLYVDDMLI +I+ LK QL+++F MKDLG K
Sbjct: 868 FKRCEADHCCYFKSF-DNSYIILLLYVDDMLITGFDIEKINNLKKQLSKQFAMKDLGAAK 926
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
+ILGM I RD+ +G L L+Q +Y+KKVL RF M E KPVSTPL H KLS + SPK +E
Sbjct: 927 QILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNE-AKPVSTPLGSHFKLSKEQSPKTEE 985
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ERD+M KVPYA+A+GSLMYAMVCTRPDI+ AV VVSR+M PGK HW AVKWILRY+ +
Sbjct: 986 ERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGS 1045
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
+D L F + GY D+D+AGD+D R+STTG++FTL +SW S LQ V LS
Sbjct: 1046 LDTCLCFTG---ASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTTISWTSNLQKIVTLS 1102
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEY+A +EA KE IWL L++LG Q+ +H DSQSAI LAKN H+++K+I
Sbjct: 1103 TTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQSAIFLAKNSAFHSKSKNIQT 1162
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINIL 1751
+YHF+R ++E+ ++LEKI ++NPA+MLTK VT K K C I +L
Sbjct: 1163 KYHFIRYLVEDKLVILEKICGSKNPANMLTKGVTIEKLKLCAASIGLL 1210
Score = 210 bits (534), Expect(2) = e-156
Identities = 114/219 (52%), Positives = 147/219 (67%), Gaps = 1/219 (0%)
Frame = +1
Query: 43 DDDEEEVQTQEPLDQSEPIA-LRRPRREIHKPARFADMVANALPVIDDDVPFTFREAVRS 219
++D+E V +Q +D S P+A +RR R I R++ V N L + D D P + EA++
Sbjct: 650 EEDKENVNSQ--VDLSTPVAEVRRSSRNIRPLQRYSP-VLNYLLLTDGDEPEGYDEALQD 706
Query: 220 PESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFAKKDGFPNKNDVHYKARLV 399
S KW+ AM++EM SL N+TW++T+LP GKKA+ KWV+ K+ + YKARLV
Sbjct: 707 ENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVYRIKNEYDGSK--RYKARLV 764
Query: 400 AKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGDLEEEIYMT 579
KG+ QKEGIDY E+FSPVVK S+IR+ DVKTAFLHGDLEE++YM
Sbjct: 765 VKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAKNLHLEQLDVKTAFLHGDLEEDLYMI 824
Query: 580 QPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFM 696
QPEGF V G+EN V KL KSLYGLKQ+PRQWYK+FD FM
Sbjct: 825 QPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFM 863
>emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera]
Length = 1261
Score = 374 bits (960), Expect(2) = e-156
Identities = 193/348 (55%), Positives = 244/348 (70%)
Frame = +3
Query: 708 YTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASQSQLEIDKLKAQLNQEFEMKDLGETK 887
+ R + DHC Y + D S+I LLLYVDDMLIA +I+ LK QL+++F MKDLG K
Sbjct: 918 FKRCEADHCCYFKSF-DNSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAK 976
Query: 888 KILGMEISRDRTSGKLCLTQKQYLKKVLQRFGMTENTKPVSTPLAPHLKLSAQLSPKNDE 1067
+ILGM I RD+ +G L L+Q +Y+KKVL RF M E KPVSTPL H KLS + SPK +E
Sbjct: 977 QILGMRIIRDKANGTLKLSQSEYVKKVLXRFNMNE-AKPVSTPLGSHFKLSKEQSPKTEE 1035
Query: 1068 ERDYMDKVPYANAVGSLMYAMVCTRPDISQAVSVVSRYMHDPGKGHWHAVKWILRYILNT 1247
ERD M KVPYA+A+GSLMYAMVCTR DI+ AV VVSR+M PGK HW AVKWILRY+ +
Sbjct: 1036 ERDXMSKVPYASAIGSLMYAMVCTRLDIAHAVGVVSRFMSXPGKQHWEAVKWILRYLKGS 1095
Query: 1248 VDVGLVFEQDGKLGQSIVGYCDSDYAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVALS 1427
+D L F + GY D+D+AGD+D R+STTG++FTL +SW S LQ V LS
Sbjct: 1096 LDTCLCFTG---ASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLS 1152
Query: 1428 TTEAEYMAVSEAVKEAIWLQSLLEDLGVGQKHITVHCDSQSAIHLAKNQVLHARTKHIDV 1607
TTEAEY+A +EA KE IWL L++LG Q+ +H DSQSAI LAKN H+++KHI
Sbjct: 1153 TTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQSAIFLAKNSAFHSKSKHIQT 1212
Query: 1608 RYHFVREILEEGNILLEKIHTTENPADMLTKVVTSVKFKHCLYLINIL 1751
+YHF+R ++E+ ++LEKI ++NPADMLTK VT K K C I +L
Sbjct: 1213 KYHFIRYLVEDKLVILEKICGSKNPADMLTKGVTIEKLKLCAASIGLL 1260
Score = 207 bits (527), Expect(2) = e-156
Identities = 113/219 (51%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Frame = +1
Query: 43 DDDEEEVQTQEPLDQSEPIA-LRRPRREIHKPARFADMVANALPVIDDDVPFTFREAVRS 219
++D+E V +Q +D S PI +RR R P R++ V N L + D P + EA++
Sbjct: 700 EEDKENVNSQ--VDLSTPIVEVRRSSRNTRPPQRYSP-VLNYLLLTDGGEPECYDEALQD 756
Query: 220 PESEKWKGAMEEEMQSLQKNKTWKVTQLPKGKKAIGCKWVFAKKDGFPNKNDVHYKARLV 399
S KW+ AM++EM SL N+TW++T+LP GKKA+ KWV+ K+ + YKARLV
Sbjct: 757 ENSSKWELAMKDEMDSLLGNQTWZLTELPVGKKALHNKWVYRIKN--EHDGSKRYKARLV 814
Query: 400 AKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXXDVKTAFLHGDLEEEIYMT 579
KG+ QKEGIDY E+FSPVVK S+IR+ DVKTAFLHGDLEE++YM
Sbjct: 815 VKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMI 874
Query: 580 QPEGFKVAGKENWVYKLIKSLYGLKQSPRQWYKRFDKFM 696
QPEGF V G+EN V KL KSLYGLKQ+PRQWYK+FD FM
Sbjct: 875 QPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFM 913