BLASTX nr result
ID: Rehmannia26_contig00021119
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00021119
(842 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30945.3| unnamed protein product [Vitis vinifera] 422 e-115
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi... 422 e-115
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera] 419 e-115
ref|XP_006364881.1| PREDICTED: pentatricopeptide repeat-containi... 409 e-112
ref|XP_002316718.1| pentatricopeptide repeat-containing family p... 408 e-111
ref|XP_006306792.1| hypothetical protein CARUB_v10008329mg [Caps... 404 e-110
gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thali... 403 e-110
ref|NP_174320.2| PPR repeat domain-containing protein [Arabidops... 403 e-110
ref|XP_004293531.1| PREDICTED: pentatricopeptide repeat-containi... 402 e-109
gb|EMJ15895.1| hypothetical protein PRUPE_ppa026763mg, partial [... 401 e-109
ref|XP_004244882.1| PREDICTED: pentatricopeptide repeat-containi... 399 e-109
ref|XP_006415489.1| hypothetical protein EUTSA_v10006807mg [Eutr... 397 e-108
ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arab... 395 e-108
ref|XP_002531431.1| pentatricopeptide repeat-containing protein,... 395 e-108
gb|EOY27595.1| Tetratricopeptide repeat-like superfamily protein... 395 e-107
gb|EOY27594.1| Tetratricopeptide repeat (TPR)-like superfamily p... 395 e-107
ref|XP_006468264.1| PREDICTED: pentatricopeptide repeat-containi... 392 e-107
ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containi... 390 e-106
ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containi... 390 e-106
ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containi... 389 e-106
>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 422 bits (1084), Expect = e-115
Identities = 200/281 (71%), Positives = 235/281 (83%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSE-GWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC+ GNS EAREMMNMSE WW PNA+TYSV+MHGFRREGK SEACD+VREMI+KGF+P+
Sbjct: 488 LCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPT 547
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLIQSLCQ + D+A++ ME+CL GCAVNVVNFTTVIHGFCQ DL+AALS+LD
Sbjct: 548 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 607
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+NKHPD VTYTT+IDALG+KGRI EA ++ KML GL+PTPVTYR++IH +C+ G
Sbjct: 608 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMG 667
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V CRTAYNQVIEKLC FG +++AY+LLGKVLRTAS+IDANTCH+L
Sbjct: 668 RVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHML 727
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
I S+L G PL SY VACRMFNRNL+PDLKLCE+VSKKL+L
Sbjct: 728 IESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 768
Score = 114 bits (285), Expect = 4e-23
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R +M + + P+ VTY+ +H + G EA + +RE + F
Sbjct: 347 LCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 406
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S C+ GR D+A++++ E KGC +VV +T+VI+G CQ +D A +L
Sbjct: 407 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 466
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
MY + P+ V+YT +++ L + G EA EM +P +TY L+H F ++
Sbjct: 467 RQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRRE 526
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTC 709
GK T N +I+ LC VDEA + + L ++
Sbjct: 527 GKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNF 586
Query: 710 HILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
+I F + + + + M+ N PD+
Sbjct: 587 TTVIHGFCQKDDLEAALSLLDDMYLSNKHPDV 618
Score = 91.7 bits (226), Expect = 3e-16
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
PN +TY+ ++ G+ +L +A +++ EM KG P + ++ LC+ R + R L
Sbjct: 300 PNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLL 359
Query: 248 MEECLK-KGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
ME+ LK + V + T +H + G D AL L + D+V Y+ ++ +
Sbjct: 360 MEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFC 419
Query: 425 RKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCR--- 595
R+GR+++A E+ +M G +P VTY S+I+ CQ+ KV C+
Sbjct: 420 REGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKV-DQAKKMLRQMYKHGCKPNT 478
Query: 596 TAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACR 775
+Y ++ LC G EA E++ +A T +L+ F + G + +
Sbjct: 479 VSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVRE 538
Query: 776 MFNRNLVP 799
M + P
Sbjct: 539 MIKKGFFP 546
Score = 82.4 bits (202), Expect = 2e-13
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 1/242 (0%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+ +M + R GKL A ++ M + G P N I L R D+A + +E
Sbjct: 235 FGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQ 294
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
NV+ + +I G+C + L+ A+ ++ +M PD+++Y TV+ L ++ RI
Sbjct: 295 IVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIK 354
Query: 443 EAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTAYNQVIE 619
E + +KML S LLP VTY + +H
Sbjct: 355 EVRLLMEKMLKDSNLLPDQVTYNTFVH--------------------------------- 381
Query: 620 KLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNLVP 799
L G+ DEA E L + R+D ++ SF + G + + MF++ +P
Sbjct: 382 MLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP 441
Query: 800 DL 805
D+
Sbjct: 442 DV 443
>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
[Vitis vinifera]
Length = 733
Score = 422 bits (1084), Expect = e-115
Identities = 200/281 (71%), Positives = 235/281 (83%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSE-GWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC+ GNS EAREMMNMSE WW PNA+TYSV+MHGFRREGK SEACD+VREMI+KGF+P+
Sbjct: 425 LCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPT 484
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLIQSLCQ + D+A++ ME+CL GCAVNVVNFTTVIHGFCQ DL+AALS+LD
Sbjct: 485 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+NKHPD VTYTT+IDALG+KGRI EA ++ KML GL+PTPVTYR++IH +C+ G
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMG 604
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V CRTAYNQVIEKLC FG +++AY+LLGKVLRTAS+IDANTCH+L
Sbjct: 605 RVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHML 664
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
I S+L G PL SY VACRMFNRNL+PDLKLCE+VSKKL+L
Sbjct: 665 IESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 705
Score = 114 bits (285), Expect = 4e-23
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R +M + + P+ VTY+ +H + G EA + +RE + F
Sbjct: 284 LCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 343
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S C+ GR D+A++++ E KGC +VV +T+VI+G CQ +D A +L
Sbjct: 344 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 403
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
MY + P+ V+YT +++ L + G EA EM +P +TY L+H F ++
Sbjct: 404 RQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRRE 463
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTC 709
GK T N +I+ LC VDEA + + L ++
Sbjct: 464 GKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNF 523
Query: 710 HILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
+I F + + + + M+ N PD+
Sbjct: 524 TTVIHGFCQKDDLEAALSLLDDMYLSNKHPDV 555
Score = 91.7 bits (226), Expect = 3e-16
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
PN +TY+ ++ G+ +L +A +++ EM KG P + ++ LC+ R + R L
Sbjct: 237 PNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLL 296
Query: 248 MEECLK-KGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
ME+ LK + V + T +H + G D AL L + D+V Y+ ++ +
Sbjct: 297 MEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFC 356
Query: 425 RKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCR--- 595
R+GR+++A E+ +M G +P VTY S+I+ CQ+ KV C+
Sbjct: 357 REGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKV-DQAKKMLRQMYKHGCKPNT 415
Query: 596 TAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACR 775
+Y ++ LC G EA E++ +A T +L+ F + G + +
Sbjct: 416 VSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVRE 475
Query: 776 MFNRNLVP 799
M + P
Sbjct: 476 MIKKGFFP 483
Score = 82.4 bits (202), Expect = 2e-13
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 1/242 (0%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+ +M + R GKL A ++ M + G P N I L R D+A + +E
Sbjct: 172 FGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQ 231
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
NV+ + +I G+C + L+ A+ ++ +M PD+++Y TV+ L ++ RI
Sbjct: 232 IVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIK 291
Query: 443 EAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTAYNQVIE 619
E + +KML S LLP VTY + +H
Sbjct: 292 EVRLLMEKMLKDSNLLPDQVTYNTFVH--------------------------------- 318
Query: 620 KLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNLVP 799
L G+ DEA E L + R+D ++ SF + G + + MF++ +P
Sbjct: 319 MLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP 378
Query: 800 DL 805
D+
Sbjct: 379 DV 380
>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 419 bits (1078), Expect = e-115
Identities = 199/281 (70%), Positives = 234/281 (83%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSE-GWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC+ GNS EAREMMNMSE WW PNA+TYSV+MHGFRREGK SEACD+VREMI+KGF+P+
Sbjct: 425 LCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPT 484
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLIQSLCQ + D+A++ ME+CL GCAVNVVNFTTVIHGFCQ DL+AALS+LD
Sbjct: 485 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+NKHPD VTYTT+IDALG+KGRI EA ++ KML G +PTPVTYR++IH +C+ G
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMG 604
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V CRTAYNQVIEKLC FG +++AY+LLGKVLRTAS+IDANTCH+L
Sbjct: 605 RVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHML 664
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
I S+L G PL SY VACRMFNRNL+PDLKLCE+VSKKL+L
Sbjct: 665 IESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 705
Score = 113 bits (283), Expect = 7e-23
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R +M + + P+ VTY+ +H + G EA + +RE + F
Sbjct: 284 LCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 343
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S C+ GR D+A++++ E KGC +VV +T+VI+G CQ +D A +L
Sbjct: 344 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 403
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
MY + P+ V+YT +++ L + G EA EM +P +TY L+H F ++
Sbjct: 404 RQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRRE 463
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTC 709
GK T N +I+ LC VDEA + + L ++
Sbjct: 464 GKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNF 523
Query: 710 HILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
+I F + + + + M+ N PD+
Sbjct: 524 TTVIHGFCQKDDLEAALSLLDDMYLSNKHPDV 555
Score = 91.3 bits (225), Expect = 4e-16
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
PN +TY+ ++ G+ +L +A +++ EM KG P + ++ LC+ R + R L
Sbjct: 237 PNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLL 296
Query: 248 MEECLK-KGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
ME+ LK + V + T +H + G D AL L + D+V Y+ ++ +
Sbjct: 297 MEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFC 356
Query: 425 RKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCR--- 595
R+GR+++A E+ +M G +P VTY S+I+ CQ+ KV C+
Sbjct: 357 REGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKV-DQAKKMLRQMYKHGCKPNT 415
Query: 596 TAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACR 775
+Y ++ LC G EA E++ +A T +L+ F + G + +
Sbjct: 416 VSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVRE 475
Query: 776 MFNRNLVP 799
M + P
Sbjct: 476 MIKKGFFP 483
Score = 79.3 bits (194), Expect = 2e-12
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 1/242 (0%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+ +M + R GKL A + M + G P N I L R D+A + +E
Sbjct: 172 FGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQ 231
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
NV+ + +I G+C + L+ A ++ +M PD+++Y TV+ L ++ RI
Sbjct: 232 IVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIK 291
Query: 443 EAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTAYNQVIE 619
E + +KML S LLP VTY + +H
Sbjct: 292 ELRLLMEKMLKDSNLLPDQVTYNTFVH--------------------------------- 318
Query: 620 KLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNLVP 799
L G+ DEA E L + R+D ++ SF + G + + MF++ +P
Sbjct: 319 MLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP 378
Query: 800 DL 805
D+
Sbjct: 379 DV 380
>ref|XP_006364881.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
[Solanum tuberosum]
Length = 843
Score = 409 bits (1050), Expect = e-112
Identities = 193/280 (68%), Positives = 232/280 (82%), Gaps = 1/280 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEGWW-TPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC+RG S+EA+E+MN SE WW PNA+T+SV+MHG+RREGKLSEAC++ REMI KGF+ S
Sbjct: 536 LCQRGRSAEAQEIMNTSEEWWWRPNAITFSVVMHGYRREGKLSEACEVGREMIGKGFFLS 595
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINL+I+SLCQ GR D+A++ M ECLKKGCAVNVVNFTTVIHGFC +LDAALSVLD
Sbjct: 596 PVEINLIIKSLCQEGRADEAKRFMVECLKKGCAVNVVNFTTVIHGFCLKNELDAALSVLD 655
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL NKHPD VTYTT+ID LG++GRI EA+ ++ KMLH G+LPT VTYR++IH FCQQ
Sbjct: 656 DMYLINKHPDVVTYTTLIDGLGKQGRIEEAIGLSNKMLHRGVLPTAVTYRTVIHRFCQQH 715
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V C+TAYNQVIEKLC GY DEAY+LLGKVLRTASR+D+NTCHIL
Sbjct: 716 RVDDLLVLLEKMLSREGCKTAYNQVIEKLCGLGYTDEAYKLLGKVLRTASRVDSNTCHIL 775
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLI 838
I S+LK GNPL SY+VACRMFNRNL+PDLK+C++V +L+
Sbjct: 776 IESYLKEGNPLSSYKVACRMFNRNLIPDLKVCDKVRDRLM 815
Score = 115 bits (288), Expect = 2e-23
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 4/271 (1%)
Frame = +2
Query: 5 CRRGNSSEAREMMNM--SEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
C + + E RE++ + P+ VTY+ I+H + G EA +RE +GF
Sbjct: 396 CTKKQTDEVRELVEKMAKDSNLLPDQVTYNTIIHMLSKHGHADEALGFLREAEERGFRVD 455
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
V + ++ S C+ G D+A++L+ E + KGC +VV +T V++GFC G +D A +L
Sbjct: 456 KVGYSAVVNSFCKEGSLDKAKELVNEMIAKGCPPDVVTYTAVLNGFCLAGKIDQAKKLLQ 515
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
MY P+ VTYT +++ L ++GR EA E+ P +T+ ++H + ++G
Sbjct: 516 HMYKYGCKPNTVTYTALLNGLCQRGRSAEAQEIMNTSEEWWWRPNAITFSVVMHGYRREG 575
Query: 539 KV--XXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCH 712
K+ N +I+ LC G DEA + + L+ ++
Sbjct: 576 KLSEACEVGREMIGKGFFLSPVEINLIIKSLCQEGRADEAKRFMVECLKKGCAVNVVNFT 635
Query: 713 ILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
+I F + V M+ N PD+
Sbjct: 636 TVIHGFCLKNELDAALSVLDDMYLINKHPDV 666
Score = 98.2 bits (243), Expect = 3e-18
Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 4/230 (1%)
Frame = +2
Query: 65 TPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARK 244
TPN VTY+ ++ G+ ++ +A +++ EM KG YP V LI C +TD+ R+
Sbjct: 347 TPNVVTYNCLIKGYCDVHRVEDALELIAEMPYKGCYPDKVSYYTLIAFFCTKKQTDEVRE 406
Query: 245 LMEECLK-KGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDAL 421
L+E+ K + V + T+IH + G D AL L + D+V Y+ V+++
Sbjct: 407 LVEKMAKDSNLLPDQVTYNTIIHMLSKHGHADEALGFLREAEERGFRVDKVGYSAVVNSF 466
Query: 422 GRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCR-- 595
++G +++A E+ +M+ G P VTY ++++ FC GK+ C+
Sbjct: 467 CKEGSLDKAKELVNEMIAKGCPPDVVTYTAVLNGFCLAGKI-DQAKKLLQHMYKYGCKPN 525
Query: 596 -TAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNG 742
Y ++ LC G EA E++ R +A T +++ + + G
Sbjct: 526 TVTYTALLNGLCQRGRSAEAQEIMNTSEEWWWRPNAITFSVVMHGYRREG 575
Score = 87.0 bits (214), Expect = 7e-15
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+ +M F R G L +A I+ M R G P N I L + +T++A + +E
Sbjct: 283 FGCVMVAFSRAGHLRKAMQILNVMQRAGIEPDLSICNTAIYVLVKGDKTEKALRFLERMQ 342
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G NVV + +I G+C + ++ AL ++ +M +PD+V+Y T+I K + +
Sbjct: 343 LVGITPNVVTYNCLIKGYCDVHRVEDALELIAEMPYKGCYPDKVSYYTLIAFFCTKKQTD 402
Query: 443 EAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCRTAYNQV 613
E E+ +KM S LLP VTY ++IH + G + Y+ V
Sbjct: 403 EVRELVEKMAKDSNLLPDQVTYNTIIHMLSKHGHADEALGFLREAEERGFRVDKVGYSAV 462
Query: 614 IEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNG 742
+ C G +D+A EL+ +++ D T ++ F G
Sbjct: 463 VNSFCKEGSLDKAKELVNEMIAKGCPPDVVTYTAVLNGFCLAG 505
Score = 65.1 bits (157), Expect = 3e-08
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 3/225 (1%)
Frame = +2
Query: 140 IVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFC 319
I++ M R+ P + ++ + + G +A +++ + G ++ T I+
Sbjct: 267 ILKLMARRRIPQRPEDFGCVMVAFSRAGHLRKAMQILNVMQRAGIEPDLSICNTAIYVLV 326
Query: 320 QMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPV 499
+ + AL L+ M L P+ VTY +I R+ +A+E+ +M + G P V
Sbjct: 327 KGDKTEKALRFLERMQLVGITPNVVTYNCLIKGYCDVHRVEDALELIAEMPYKGCYPDKV 386
Query: 500 TYRSLIHHFCQQGKVXXXXXXXXXXXXXXNC---RTAYNQVIEKLCCFGYVDEAYELLGK 670
+Y +LI FC + + N + YN +I L G+ DEA L +
Sbjct: 387 SYYTLIAFFCTKKQTDEVRELVEKMAKDSNLLPDQVTYNTIIHMLSKHGHADEALGFLRE 446
Query: 671 VLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
R+D ++ SF K G+ + + M + PD+
Sbjct: 447 AEERGFRVDKVGYSAVVNSFCKEGSLDKAKELVNEMIAKGCPPDV 491
Score = 62.8 bits (151), Expect = 2e-07
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
P+ VTY+ ++ G ++G++ EA + +M+ +G P+ V +I CQ R D L
Sbjct: 664 PDVVTYTTLIDGLGKQGRIEEAIGLSNKMLHRGVLPTAVTYRTVIHRFCQQHRVDDLLVL 723
Query: 248 MEECL-KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
+E+ L ++GC + VI C +G D A +L + D T +I++
Sbjct: 724 LEKMLSREGCKTA---YNQVIEKLCGLGYTDEAYKLLGKVLRTASRVDSNTCHILIESYL 780
Query: 425 RKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKV 544
++G + ++ +M + L+P + Q G+V
Sbjct: 781 KEGNPLSSYKVACRMFNRNLIPDLKVCDKVRDRLMQGGRV 820
>ref|XP_002316718.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222859783|gb|EEE97330.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 684
Score = 408 bits (1048), Expect = e-111
Identities = 193/280 (68%), Positives = 233/280 (83%), Gaps = 1/280 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC++GNSSEAREMM SE WWTPNA+TYSV+MHGFRREGKLS+ACD+VREMI KGF+P+
Sbjct: 373 LCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPT 432
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLL+QSLC++GR D+A+K MEECL GCAVN VNFTTVIH FCQ D++AALS+LD
Sbjct: 433 PVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLD 492
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+NKHPD VTYTT+IDALG+KGRI EA E+T KML G+ PTPVTYR++IH + Q G
Sbjct: 493 DMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIG 552
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V CRTA+NQVIEKLC FG ++ A +LLGKVLRTASRIDANTCH+L
Sbjct: 553 RVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVL 612
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLI 838
+ S+L+ G PL +Y+VACRMF+R+L+PDLKLCE+V KKL+
Sbjct: 613 MESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLM 652
Score = 117 bits (294), Expect = 4e-24
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 3/270 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN-MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC+ E +++ M + + VTY+ ++H + EA +RE ++GF
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVD 292
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
V + ++ S C+ GR DQA++++ E +GC +VV +T +I+GF Q G++ A +L
Sbjct: 293 KVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQ 352
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
MY + P+ V+YT + L +KG +EA EM K P +TY ++H F ++G
Sbjct: 353 QMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREG 412
Query: 539 KVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCH 712
K+ T N +++ LC G VDEA + + + L ++A
Sbjct: 413 KLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFT 472
Query: 713 ILIRSFLKNGNPLGSYRVACRMFNRNLVPD 802
+I F + + + + M+ N PD
Sbjct: 473 TVIHRFCQQDDIEAALSLLDDMYLSNKHPD 502
Score = 94.0 bits (232), Expect = 6e-17
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 2/242 (0%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+ +M + R GKL A ++ M + G P+ + N I L ++A + +E
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQ 180
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G NVV + +I G+C + ++ A+ ++ +M L PD+V+Y TV+ L + RI
Sbjct: 181 LLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIR 240
Query: 443 EAVEMTKKMLHSGLLPTPVTYRSLIHHFC--QQGKVXXXXXXXXXXXXXXNCRTAYNQVI 616
E +++ +KM + LL VTY +LIH C Q + Y+ ++
Sbjct: 241 EVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIV 300
Query: 617 EKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNLV 796
+ C G +D+A E++ ++ D T +I F + G + ++ +M+
Sbjct: 301 DSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCK 360
Query: 797 PD 802
P+
Sbjct: 361 PN 362
Score = 93.6 bits (231), Expect = 8e-17
Identities = 43/158 (27%), Positives = 83/158 (52%)
Frame = +2
Query: 65 TPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARK 244
+P+ V+Y +M + ++ E D++ +M V N LI LC+ D+A +
Sbjct: 220 SPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQ 279
Query: 245 LMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
+ E K+G V+ V ++ ++ +C+ G +D A ++++M+ PD VTYT +I+
Sbjct: 280 FLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFS 339
Query: 425 RKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
+ G + +A +M ++M G P V+Y + + CQ+G
Sbjct: 340 QAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKG 377
Score = 89.0 bits (219), Expect = 2e-15
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 3/247 (1%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
PN VTY+ ++ G+ ++ +A +++ EM KG P V ++ LC+ R + +
Sbjct: 186 PNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDV 245
Query: 248 MEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGR 427
+E+ + V + T+IH C+ D AL L + D+V Y+ ++D+ +
Sbjct: 246 IEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCK 305
Query: 428 KGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCR---T 598
+GR+++A E+ +M G +P VTY ++I+ F Q G+V C+
Sbjct: 306 EGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEV-GQARKMLQQMYKHGCKPNTV 364
Query: 599 AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRM 778
+Y ++ LC G EA E++ +A T +++ F + G + V M
Sbjct: 365 SYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREM 424
Query: 779 FNRNLVP 799
+ P
Sbjct: 425 IGKGFFP 431
Score = 79.7 bits (195), Expect = 1e-12
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 2/245 (0%)
Frame = +2
Query: 77 VTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEE 256
+ Y V++ + A ++R M+R+G +P + ++ S + G+ A +++
Sbjct: 84 IVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTM 143
Query: 257 CLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGR 436
K G N++ T IH L+ AL L+ M L P+ VTY +I R
Sbjct: 144 MQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHR 203
Query: 437 INEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNC--RTAYNQ 610
+ +A+E+ +M G P V+Y +++ C+ ++ + YN
Sbjct: 204 VEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNT 263
Query: 611 VIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRN 790
+I LC + DEA + L + + ++D ++ S+ K G + + MF R
Sbjct: 264 LIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRG 323
Query: 791 LVPDL 805
+PD+
Sbjct: 324 CIPDV 328
Score = 68.9 bits (167), Expect = 2e-09
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
P+AVTY+ I+ ++G++ EA ++ +M++KG P+PV +I Q+GR + L
Sbjct: 501 PDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNL 560
Query: 248 MEECL-KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
+++ L ++ C F VI C G+L+AA +L + D T ++++
Sbjct: 561 LDKMLTRQECRTA---FNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYL 617
Query: 425 RKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
RKG A ++ +M L+P + Q+GK
Sbjct: 618 RKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGK 656
>ref|XP_006306792.1| hypothetical protein CARUB_v10008329mg [Capsella rubella]
gi|565498308|ref|XP_006306793.1| hypothetical protein
CARUB_v10008329mg [Capsella rubella]
gi|482575503|gb|EOA39690.1| hypothetical protein
CARUB_v10008329mg [Capsella rubella]
gi|482575504|gb|EOA39691.1| hypothetical protein
CARUB_v10008329mg [Capsella rubella]
Length = 810
Score = 404 bits (1039), Expect = e-110
Identities = 194/281 (69%), Positives = 227/281 (80%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
+CR G S EAREMMNMSE WW+PN++TYSVIMHG RREGKLSEACD+VREM+ KGF+P
Sbjct: 500 MCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 559
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLL+QSLC+ GRT +ARK MEECL KGCA+NVVNFTTVIHGFCQ +LDAALSVLD
Sbjct: 560 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 619
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL NKH D TYTT+ID LG+KGRI EA E+ KKMLH G+ PTPVTYR++IH +CQ G
Sbjct: 620 DMYLINKHADVFTYTTLIDTLGKKGRILEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 679
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
KV CRT YNQVIEKLC G ++EA +LLGKVLRTAS DA TC++L
Sbjct: 680 KVDDLVAILEKMILRQKCRTVYNQVIEKLCGLGKLEEADKLLGKVLRTASVSDAKTCYVL 739
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
I +LK G PL +Y+VACRMFNRNLVPD+K+CE++SK+L+L
Sbjct: 740 IEGYLKKGAPLSAYKVACRMFNRNLVPDIKMCEKLSKRLVL 780
Score = 105 bits (262), Expect = 2e-20
Identities = 63/229 (27%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ G SEA++++N +S+G P+ VTY+ +++GF R G++ +A +++ M G P
Sbjct: 429 LCKEGRMSEAKDLINEMLSQGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 488
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
+ V L+ +C+ G++ +AR++M + + N + ++ ++HG + G L A V+
Sbjct: 489 NTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 548
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
+M L P V ++ +L R GR +EA + ++ L+ G V + ++IH FCQ
Sbjct: 549 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 608
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVL 676
++ Y +I+ L G + EA EL+ K+L
Sbjct: 609 DELDAALSVLDDMYLINKHADVFTYTTLIDTLGKKGRILEATELMKKML 657
Score = 86.7 bits (213), Expect = 1e-14
Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 4/182 (2%)
Frame = +2
Query: 11 RGNSSEA--REMMNMSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPV 184
RGN E R + M PN VTY+ ++ G+ ++ EA +++ +M KG P V
Sbjct: 290 RGNRLEKALRFLERMQVVGIMPNVVTYNCMIRGYCDLHRVEEAIELLEDMPSKGCLPDKV 349
Query: 185 EINLLIQSLCQVGRTDQARKLMEECLKK-GCAVNVVNFTTVIHGFCQMGDLDAALSVLDD 361
++ LC+ R + R LM++ K+ G + V + T+IH + D AL L+D
Sbjct: 350 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVADQVTYNTLIHMLTKHDHADEALWFLND 409
Query: 362 MYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTP-VTYRSLIHHFCQQG 538
D+V Y+ ++ AL ++GR++EA ++ +ML G P VTY ++++ FC+ G
Sbjct: 410 AEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSQGHCPPDVVTYTAVVNGFCRLG 469
Query: 539 KV 544
+V
Sbjct: 470 EV 471
Score = 83.2 bits (204), Expect = 1e-13
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+S +M + R G+L +A ++ M R G P + N I + R ++A + +E
Sbjct: 246 FSFVMVSYSRAGQLRDALKVLTLMQRAGVEPDLLICNTTIDVFLRGNRLEKALRFLERMQ 305
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G NVV + +I G+C + ++ A+ +L+DM PD+V+Y T++ L ++ RI
Sbjct: 306 VVGIMPNVVTYNCMIRGYCDLHRVEEAIELLEDMPSKGCLPDKVSYYTIMGYLCKEKRIV 365
Query: 443 EAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCRTAYNQV 613
E ++ KKM GL+ VTY +LIH + + Y+ +
Sbjct: 366 EVRDLMKKMAKEHGLVADQVTYNTLIHMLTKHDHADEALWFLNDAEEKGFRIDKVGYSAI 425
Query: 614 IEKLCCFGYVDEAYELLGKVL 676
+ LC G + EA +L+ ++L
Sbjct: 426 VHALCKEGRMSEAKDLINEML 446
Score = 66.6 bits (161), Expect = 1e-08
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 3/200 (1%)
Frame = +2
Query: 152 MIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGD 331
M R+G Y SP + ++ S + G+ A K++ + G +++ T I F +
Sbjct: 234 MRRRGIYRSPTAFSFVMVSYSRAGQLRDALKVLTLMQRAGVEPDLLICNTTIDVFLRGNR 293
Query: 332 LDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRS 511
L+ AL L+ M + P+ VTY +I R+ EA+E+ + M G LP V+Y +
Sbjct: 294 LEKALRFLERMQVVGIMPNVVTYNCMIRGYCDLHRVEEAIELLEDMPSKGCLPDKVSYYT 353
Query: 512 LIHHFCQQGKVXXXXXXXXXXXXXXNC---RTAYNQVIEKLCCFGYVDEAYELLGKVLRT 682
++ + C++ ++ + YN +I L + DEA L
Sbjct: 354 IMGYLCKEKRIVEVRDLMKKMAKEHGLVADQVTYNTLIHMLTKHDHADEALWFLNDAEEK 413
Query: 683 ASRIDANTCHILIRSFLKNG 742
RID ++ + K G
Sbjct: 414 GFRIDKVGYSAIVHALCKEG 433
Score = 63.2 bits (152), Expect = 1e-07
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGF----------------------- 106
LCR G + EAR+ M +++G N V ++ ++HGF
Sbjct: 570 LCRDGRTHEARKFMEECLNKGC-AINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 628
Query: 107 ------------RREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLM 250
++G++ EA +++++M+ KG P+PV +I CQ+G+ D ++
Sbjct: 629 DVFTYTTLIDTLGKKGRILEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL 688
Query: 251 EECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRK 430
E+ + + V N VI C +G L+ A +L + D T +I+ +K
Sbjct: 689 EKMILRQKCRTVYN--QVIEKLCGLGKLEEADKLLGKVLRTASVSDAKTCYVLIEGYLKK 746
Query: 431 GRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKV 544
G A ++ +M + L+P L GKV
Sbjct: 747 GAPLSAYKVACRMFNRNLVPDIKMCEKLSKRLVLDGKV 784
>gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 403 bits (1036), Expect = e-110
Identities = 192/281 (68%), Positives = 226/281 (80%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
+CR G S EAREMMNMSE WW+PN++TYSVIMHG RREGKLSEACD+VREM+ KGF+P
Sbjct: 495 MCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 554
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLL+QSLC+ GRT +ARK MEECL KGCA+NVVNFTTVIHGFCQ +LDAALSVLD
Sbjct: 555 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 614
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL NKH D TYTT++D LG+KGRI EA E+ KKMLH G+ PTPVTYR++IH +CQ G
Sbjct: 615 DMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 674
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
KV CRT YNQVIEKLC G ++EA LLGKVLRTASR DA TC+ L
Sbjct: 675 KVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYAL 734
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ +LK G PL +Y+VACRMFNRNL+PD+K+CE++SK+L+L
Sbjct: 735 MEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVL 775
Score = 100 bits (250), Expect = 5e-19
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 2/227 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSP 181
LC+ G SEA++++N + P+ VTY+ +++GF R G++ +A +++ M G P+
Sbjct: 428 LCKEGRMSEAKDLINEMD--CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNT 485
Query: 182 VEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDD 361
V L+ +C+ G++ +AR++M + + N + ++ ++HG + G L A V+ +
Sbjct: 486 VSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVRE 545
Query: 362 MYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
M L P V ++ +L R GR +EA + ++ L+ G V + ++IH FCQ +
Sbjct: 546 MVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDE 605
Query: 542 VXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVL 676
+ Y +++ L G + EA EL+ K+L
Sbjct: 606 LDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 652
Score = 88.6 bits (218), Expect = 3e-15
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 3/206 (1%)
Frame = +2
Query: 65 TPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARK 244
TP A +S +M + R G+L +A ++ M R G P+ + N I + R ++A +
Sbjct: 241 TPEA--FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR 298
Query: 245 LMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
+E G NVV + +I G+C + ++ A+ +L+DM+ PD+V+Y T++ L
Sbjct: 299 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC 358
Query: 425 RKGRINEAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCR 595
++ RI E ++ KKM GL+P VTY +LIH + +
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418
Query: 596 TAYNQVIEKLCCFGYVDEAYELLGKV 673
Y+ ++ LC G + EA +L+ ++
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEM 444
Score = 65.5 bits (158), Expect = 2e-08
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGF----------------------- 106
LCR G + EAR+ M +++G N V ++ ++HGF
Sbjct: 565 LCRDGRTHEARKFMEECLNKGC-AINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 623
Query: 107 ------------RREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLM 250
++G+++EA +++++M+ KG P+PV +I CQ+G+ D ++
Sbjct: 624 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL 683
Query: 251 EECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRK 430
E+ + + + N VI C +G L+ A ++L + D T +++ +K
Sbjct: 684 EKMISRQKCRTIYN--QVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKK 741
Query: 431 GRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKV 544
G A ++ +M + L+P L +GKV
Sbjct: 742 GVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKV 779
>ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing
protein [Arabidopsis thaliana]
Length = 806
Score = 403 bits (1036), Expect = e-110
Identities = 192/281 (68%), Positives = 226/281 (80%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
+CR G S EAREMMNMSE WW+PN++TYSVIMHG RREGKLSEACD+VREM+ KGF+P
Sbjct: 499 MCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 558
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLL+QSLC+ GRT +ARK MEECL KGCA+NVVNFTTVIHGFCQ +LDAALSVLD
Sbjct: 559 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 618
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL NKH D TYTT++D LG+KGRI EA E+ KKMLH G+ PTPVTYR++IH +CQ G
Sbjct: 619 DMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 678
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
KV CRT YNQVIEKLC G ++EA LLGKVLRTASR DA TC+ L
Sbjct: 679 KVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYAL 738
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ +LK G PL +Y+VACRMFNRNL+PD+K+CE++SK+L+L
Sbjct: 739 MEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVL 779
Score = 106 bits (264), Expect = 1e-20
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 5/251 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNM--SEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R++M E P+ VTY+ ++H + EA +++ KGF
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKG-CAVNVVNFTTVIHGFCQMGDLDAALSV 352
+ + ++ +LC+ GR +A+ L+ E L KG C +VV +T V++GFC++G++D A +
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476
Query: 353 LDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQ 532
L M+ + P+ V+YT +++ + R G+ EA EM P +TY ++H +
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536
Query: 533 QGKV--XXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANT 706
+GK+ N +++ LC G EA + + + L I+
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 707 CHILIRSFLKN 739
+I F +N
Sbjct: 597 FTTVIHGFCQN 607
Score = 105 bits (262), Expect = 2e-20
Identities = 62/229 (27%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ G SEA++++N +S+G P+ VTY+ +++GF R G++ +A +++ M G P
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
+ V L+ +C+ G++ +AR++M + + N + ++ ++HG + G L A V+
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 547
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
+M L P V ++ +L R GR +EA + ++ L+ G V + ++IH FCQ
Sbjct: 548 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 607
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVL 676
++ Y +++ L G + EA EL+ K+L
Sbjct: 608 DELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Score = 90.1 bits (222), Expect = 9e-16
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 3/207 (1%)
Frame = +2
Query: 65 TPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARK 244
TP A +S +M + R G+L +A ++ M R G P+ + N I + R ++A +
Sbjct: 241 TPEA--FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR 298
Query: 245 LMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
+E G NVV + +I G+C + ++ A+ +L+DM+ PD+V+Y T++ L
Sbjct: 299 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC 358
Query: 425 RKGRINEAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCR 595
++ RI E ++ KKM GL+P VTY +LIH + +
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418
Query: 596 TAYNQVIEKLCCFGYVDEAYELLGKVL 676
Y+ ++ LC G + EA +L+ ++L
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEML 445
Score = 65.5 bits (158), Expect = 2e-08
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGF----------------------- 106
LCR G + EAR+ M +++G N V ++ ++HGF
Sbjct: 569 LCRDGRTHEARKFMEECLNKGC-AINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 627
Query: 107 ------------RREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLM 250
++G+++EA +++++M+ KG P+PV +I CQ+G+ D ++
Sbjct: 628 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL 687
Query: 251 EECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRK 430
E+ + + + N VI C +G L+ A ++L + D T +++ +K
Sbjct: 688 EKMISRQKCRTIYN--QVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKK 745
Query: 431 GRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKV 544
G A ++ +M + L+P L +GKV
Sbjct: 746 GVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKV 783
>ref|XP_004293531.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 734
Score = 402 bits (1032), Expect = e-109
Identities = 191/281 (67%), Positives = 230/281 (81%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LCR GNS EAR+MMNMSE WWTPNA+TYSV+MHGFRREGKL EACD V+EMI+KGF+P+
Sbjct: 424 LCRGGNSLEARDMMNMSEEEWWTPNAITYSVLMHGFRREGKLVEACDTVKEMIKKGFFPT 483
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLIQSLCQ G+ D+A++ MEECL KGCAVNVVNFTTVIHG+C+ DL+AALSVLD
Sbjct: 484 PVEINLLIQSLCQEGKMDEAKRFMEECLNKGCAVNVVNFTTVIHGYCKKDDLEAALSVLD 543
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+NKHPD VTYT VI+ L +KGRI EA E+ KML G+ PTPVTYR++IH +C+
Sbjct: 544 DMYLSNKHPDAVTYTAVINELAKKGRIQEATELMIKMLGKGIDPTPVTYRTIIHWYCKMS 603
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V NC+TAYNQVIEKLC FG +EA +LLGKVLRTASR+DA TCH++
Sbjct: 604 RVDDLLTLLEKMFLRQNCKTAYNQVIEKLCSFGNFEEADKLLGKVLRTASRVDAKTCHVV 663
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ +L+ G PL +Y+VACRMF+RNL+PDLKLCE+V KKL+L
Sbjct: 664 MDGYLRKGIPLSAYKVACRMFSRNLIPDLKLCEKVIKKLML 704
Score = 120 bits (302), Expect = 5e-25
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R++M + +G P+ VTY+ ++H + G EA + +RE KGF
Sbjct: 283 LCKEKRVKEVRDLMEKMIKDGGLLPDQVTYNNLVHVLCKHGYGDEAIEFLREAEEKGFRF 342
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S C+ GR D A++++ E KGC +VV +T V++G+C++ +D A +L
Sbjct: 343 DKVGYSAIVHSFCKDGRIDMAKEIVSEMFSKGCTPDVVTYTAVLNGYCRLRKVDQAKKML 402
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
M+ + P+ V+YT +++ L R G EA +M P +TY L+H F ++
Sbjct: 403 QHMHKHGCKPNTVSYTALLNGLCRGGNSLEARDMMNMSEEEWWTPNAITYSVLMHGFRRE 462
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTC 709
GK+ T N +I+ LC G +DEA + + L ++
Sbjct: 463 GKLVEACDTVKEMIKKGFFPTPVEINLLIQSLCQEGKMDEAKRFMEECLNKGCAVNVVNF 522
Query: 710 HILIRSFLKNGNPLGSYRVACRMFNRNLVPD 802
+I + K + + V M+ N PD
Sbjct: 523 TTVIHGYCKKDDLEAALSVLDDMYLSNKHPD 553
Score = 93.2 bits (230), Expect = 1e-16
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 1/239 (0%)
Frame = +2
Query: 92 IMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECLKKG 271
+M + R GKL A ++ M + G N I L + + ++A + +E G
Sbjct: 174 VMVSYSRAGKLRHALRVLTLMQKAGLELDLAMCNTAICVLVKGNKLEKALRTLERMKLVG 233
Query: 272 CAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRINEAV 451
A NV+ + +I G+C M ++ AL +LD M PD+V+Y TV+D L ++ R+ E
Sbjct: 234 IAPNVLTYNCLIKGYCDMHRVEDALQLLDKMPKKGCAPDKVSYYTVMDFLCKEKRVKEVR 293
Query: 452 EMTKKML-HSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTAYNQVIEKLC 628
++ +KM+ GLLP VTY +L+H LC
Sbjct: 294 DLMEKMIKDGGLLPDQVTYNNLVH---------------------------------VLC 320
Query: 629 CFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
GY DEA E L + R D ++ SF K+G + + MF++ PD+
Sbjct: 321 KHGYGDEAIEFLREAEEKGFRFDKVGYSAIVHSFCKDGRIDMAKEIVSEMFSKGCTPDV 379
>gb|EMJ15895.1| hypothetical protein PRUPE_ppa026763mg, partial [Prunus persica]
Length = 802
Score = 401 bits (1031), Expect = e-109
Identities = 190/280 (67%), Positives = 231/280 (82%), Gaps = 1/280 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LCR NS EAREMMNMSE WWTPNA+TYSV+MHG RREGKL EACD+VREM+ KGF P+
Sbjct: 492 LCRSQNSLEAREMMNMSEEEWWTPNAITYSVLMHGLRREGKLVEACDMVREMVNKGFLPN 551
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLIQSLC+ G+ ++A++ MEECL KGCAVNVVNFTTVIHG+CQ DL+ ALS+LD
Sbjct: 552 PVEINLLIQSLCREGKINEAKRFMEECLNKGCAVNVVNFTTVIHGYCQKDDLETALSLLD 611
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+NKHPD +TYTTVI+ALG+KGRI EA ++ +ML GL PTPVTYR++IH +CQ G
Sbjct: 612 DMYLSNKHPDAMTYTTVINALGKKGRIQEATKLMIEMLGKGLDPTPVTYRTVIHWYCQTG 671
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
V NC+TAYNQVIEKLC FG ++EA +LLGKVLRTA+R+DA TCH+L
Sbjct: 672 SVDDLVKLLEKMFLRQNCKTAYNQVIEKLCSFGKLEEADKLLGKVLRTAARVDAKTCHVL 731
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLI 838
+ S+L+ G PL +Y+VACRMFNRNL+PDLKLCE+V+K+L+
Sbjct: 732 MDSYLRKGTPLSAYKVACRMFNRNLIPDLKLCEKVTKRLM 771
Score = 118 bits (296), Expect = 2e-24
Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 39/305 (12%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNM--SEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E RE++ ++G P+ VTY+ ++H + G EA + +RE KGF
Sbjct: 351 LCKEKRVKEVRELVEKMTNDGGLLPDQVTYNNLVHMLSKHGYGDEAVEFLREAEDKGFRF 410
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S C+ GR D A++++ E KGC +VV +T V++G+C++G +D A +L
Sbjct: 411 DKVGYSAIVHSFCKDGRIDMAKEIVNEMFSKGCTPDVVTYTAVLNGYCRLGKVDQAKKML 470
Query: 356 DDMYLNNKHPDEVTYTTVID-----------------------------------ALGRK 430
MY + P+ V+YT +++ L R+
Sbjct: 471 QHMYKHGCKPNTVSYTALLNGLCRSQNSLEAREMMNMSEEEWWTPNAITYSVLMHGLRRE 530
Query: 431 GRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTAYN- 607
G++ EA +M ++M++ G LP PV LI C++GK+ N
Sbjct: 531 GKLVEACDMVREMVNKGFLPNPVEINLLIQSLCREGKINEAKRFMEECLNKGCAVNVVNF 590
Query: 608 -QVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFN 784
VI C ++ A LL + + DA T +I + K G + ++ M
Sbjct: 591 TTVIHGYCQKDDLETALSLLDDMYLSNKHPDAMTYTTVINALGKKGRIQEATKLMIEMLG 650
Query: 785 RNLVP 799
+ L P
Sbjct: 651 KGLDP 655
Score = 90.1 bits (222), Expect = 9e-16
Identities = 67/248 (27%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Frame = +2
Query: 65 TPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARK 244
+P A Y +M + R GKL A ++ M + G + N I +L + ++A +
Sbjct: 235 SPEAFGY--VMVSYSRAGKLRHAMRVLTLMQKAGVELNVSICNTAIHALVMGNKLEKALR 292
Query: 245 LMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
++E G A NVV + +I G+C++ ++ AL ++D+M PD+V+Y TV+ L
Sbjct: 293 VLERMQLVGIAPNVVTYNCLIKGYCEVHRVEDALELIDEMPSRGCLPDKVSYYTVMGFLC 352
Query: 425 RKGRINEAVEMTKKMLH-SGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTA 601
++ R+ E E+ +KM + GLLP VTY +L+H
Sbjct: 353 KEKRVKEVRELVEKMTNDGGLLPDQVTYNNLVH--------------------------- 385
Query: 602 YNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMF 781
L GY DEA E L + R D ++ SF K+G + + MF
Sbjct: 386 ------MLSKHGYGDEAVEFLREAEDKGFRFDKVGYSAIVHSFCKDGRIDMAKEIVNEMF 439
Query: 782 NRNLVPDL 805
++ PD+
Sbjct: 440 SKGCTPDV 447
>ref|XP_004244882.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
[Solanum lycopersicum]
Length = 833
Score = 399 bits (1024), Expect = e-109
Identities = 189/280 (67%), Positives = 226/280 (80%), Gaps = 1/280 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNM-SEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC+ G S+EA+E+MN E WW PNA+T+ V+MHG+RREGKLSEAC++ REMI KGF S
Sbjct: 526 LCQSGRSAEAQEIMNTCEEWWWRPNAITFGVVMHGYRREGKLSEACEVGREMIGKGFLLS 585
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINL+I+SLCQ GR D+A+ M ECLKKGCAVNVVNFTTVIHGFC +LDAALSVLD
Sbjct: 586 PVEINLIIKSLCQEGRADEAKSFMVECLKKGCAVNVVNFTTVIHGFCLKKELDAALSVLD 645
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL NKHPD VTYTT+ID LG++GRI EA+ ++ KMLH G+LPT VTYR++IH FCQQ
Sbjct: 646 DMYLINKHPDVVTYTTLIDGLGKQGRIEEAIGLSNKMLHRGVLPTAVTYRTVIHRFCQQH 705
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V C+TAYNQVIEKLC GY DEAY+LLGKVLRTASR+D+NTCHIL
Sbjct: 706 RVDDLLVLLEKMLSREGCKTAYNQVIEKLCGLGYTDEAYKLLGKVLRTASRVDSNTCHIL 765
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLI 838
I S+LK GNPL SY+V CRMFNRNL+PDLK+C++V +L+
Sbjct: 766 IESYLKEGNPLSSYKVVCRMFNRNLIPDLKVCDKVRDRLM 805
Score = 113 bits (283), Expect = 7e-23
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 4/271 (1%)
Frame = +2
Query: 5 CRRGNSSEAREMMNM--SEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
C + + E RE++ + P+ VTY+ I+H + G EA +RE +GF
Sbjct: 386 CTKKQTEEVRELVEKMAKDSNLLPDQVTYNTIIHMLSKHGHADEALGFLREAEERGFRVD 445
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
V + ++ S C+ G D+A++L+ E + KGC +VV +T V++GFC G +D A +L
Sbjct: 446 KVGYSAVVNSFCKEGSLDKAKELVNEMIAKGCPPDVVTYTAVLNGFCLAGRIDQAKKLLQ 505
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
MY P+ VTYT +++ L + GR EA E+ P +T+ ++H + ++G
Sbjct: 506 HMYKYGCKPNTVTYTALLNGLCQSGRSAEAQEIMNTCEEWWWRPNAITFGVVMHGYRREG 565
Query: 539 KVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCH 712
K+ + N +I+ LC G DEA + + L+ ++
Sbjct: 566 KLSEACEVGREMIGKGFLLSPVEINLIIKSLCQEGRADEAKSFMVECLKKGCAVNVVNFT 625
Query: 713 ILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
+I F + V M+ N PD+
Sbjct: 626 TVIHGFCLKKELDAALSVLDDMYLINKHPDV 656
Score = 96.3 bits (238), Expect = 1e-17
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Frame = +2
Query: 65 TPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARK 244
TPN VTY+ ++ G+ ++ +A +++ EM KG YP V LI C +T++ R+
Sbjct: 337 TPNVVTYNCLIKGYCDVHRVEDALELIAEMPYKGCYPDKVSYYTLIAFFCTKKQTEEVRE 396
Query: 245 LMEECLK-KGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDAL 421
L+E+ K + V + T+IH + G D AL L + D+V Y+ V+++
Sbjct: 397 LVEKMAKDSNLLPDQVTYNTIIHMLSKHGHADEALGFLREAEERGFRVDKVGYSAVVNSF 456
Query: 422 GRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCR-- 595
++G +++A E+ +M+ G P VTY ++++ FC G++ C+
Sbjct: 457 CKEGSLDKAKELVNEMIAKGCPPDVVTYTAVLNGFCLAGRI-DQAKKLLQHMYKYGCKPN 515
Query: 596 -TAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVAC 772
Y ++ LC G EA E++ R +A T +++ + + G + V
Sbjct: 516 TVTYTALLNGLCQSGRSAEAQEIMNTCEEWWWRPNAITFGVVMHGYRREGKLSEACEVGR 575
Query: 773 RMFNRNLV 796
M + +
Sbjct: 576 EMIGKGFL 583
Score = 82.8 bits (203), Expect = 1e-13
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 3/223 (1%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+ +M F R G L +A I+ M R G P N I L + ++A +E
Sbjct: 273 FGCVMVAFSRAGHLRKAMQILNVMQRAGIEPDLSICNTAIYVLVKGDNIEKALSFLERMQ 332
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G NVV + +I G+C + ++ AL ++ +M +PD+V+Y T+I K +
Sbjct: 333 LVGITPNVVTYNCLIKGYCDVHRVEDALELIAEMPYKGCYPDKVSYYTLIAFFCTKKQTE 392
Query: 443 EAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCRTAYNQV 613
E E+ +KM S LLP VTY ++IH + G + Y+ V
Sbjct: 393 EVRELVEKMAKDSNLLPDQVTYNTIIHMLSKHGHADEALGFLREAEERGFRVDKVGYSAV 452
Query: 614 IEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNG 742
+ C G +D+A EL+ +++ D T ++ F G
Sbjct: 453 VNSFCKEGSLDKAKELVNEMIAKGCPPDVVTYTAVLNGFCLAG 495
Score = 70.9 bits (172), Expect = 6e-10
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 3/246 (1%)
Frame = +2
Query: 77 VTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEE 256
+ Y V++ R A I++ M R+ P + ++ + + G +A +++
Sbjct: 236 IVYYVMLQLLSRTKLCQGAKRILKLMARRRIPRRPEDFGCVMVAFSRAGHLRKAMQILNV 295
Query: 257 CLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGR 436
+ G ++ T I+ + +++ ALS L+ M L P+ VTY +I R
Sbjct: 296 MQRAGIEPDLSICNTAIYVLVKGDNIEKALSFLERMQLVGITPNVVTYNCLIKGYCDVHR 355
Query: 437 INEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNC---RTAYN 607
+ +A+E+ +M + G P V+Y +LI FC + + N + YN
Sbjct: 356 VEDALELIAEMPYKGCYPDKVSYYTLIAFFCTKKQTEEVRELVEKMAKDSNLLPDQVTYN 415
Query: 608 QVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNR 787
+I L G+ DEA L + R+D ++ SF K G+ + + M +
Sbjct: 416 TIIHMLSKHGHADEALGFLREAEERGFRVDKVGYSAVVNSFCKEGSLDKAKELVNEMIAK 475
Query: 788 NLVPDL 805
PD+
Sbjct: 476 GCPPDV 481
Score = 63.5 bits (153), Expect = 9e-08
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
P+ VTY+ ++ G ++G++ EA + +M+ +G P+ V +I CQ R D L
Sbjct: 654 PDVVTYTTLIDGLGKQGRIEEAIGLSNKMLHRGVLPTAVTYRTVIHRFCQQHRVDDLLVL 713
Query: 248 MEECL-KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
+E+ L ++GC + VI C +G D A +L + D T +I++
Sbjct: 714 LEKMLSREGCKTA---YNQVIEKLCGLGYTDEAYKLLGKVLRTASRVDSNTCHILIESYL 770
Query: 425 RKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKV 544
++G + ++ +M + L+P + Q G+V
Sbjct: 771 KEGNPLSSYKVVCRMFNRNLIPDLKVCDKVRDRLMQDGRV 810
Score = 57.0 bits (136), Expect = 8e-06
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN-MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMI-RKGFYP 175
L ++G EA + N M P AVTY ++H F ++ ++ + ++ +M+ R+G
Sbjct: 666 LGKQGRIEEAIGLSNKMLHRGVLPTAVTYRTVIHRFCQQHRVDDLLVLLEKMLSREG--- 722
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
N +I+ LC +G TD+A KL+ + L+ V+ +I + + G+ ++ V+
Sbjct: 723 CKTAYNQVIEKLCGLGYTDEAYKLLGKVLRTASRVDSNTCHILIESYLKEGNPLSSYKVV 782
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSG 481
M+ N PD V D L + GR+ EA ++ + + G
Sbjct: 783 CRMFNRNLIPDLKVCDKVRDRLMQDGRVEEADKLMLRFVERG 824
>ref|XP_006415489.1| hypothetical protein EUTSA_v10006807mg [Eutrema salsugineum]
gi|557093260|gb|ESQ33842.1| hypothetical protein
EUTSA_v10006807mg [Eutrema salsugineum]
Length = 820
Score = 397 bits (1021), Expect = e-108
Identities = 191/281 (67%), Positives = 227/281 (80%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LCR G S EAREMMNMSE WW+PN++TYSV+MHG RREGKLSEACD+VREMI KGF+P
Sbjct: 509 LCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRREGKLSEACDVVREMILKGFFPG 568
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLL+QSL + G+T +ARK MEECL KGCA+NVVNFTTVIHGFCQ +LDAALSVLD
Sbjct: 569 PVEINLLLQSLSRDGKTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 628
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL NKH D TYTT++DALG+KGRI EA E+ KKMLH G+ PTPVTYR++IH +CQ G
Sbjct: 629 DMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 688
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
KV CRT YNQVIEKLC G ++EA +LLGKVLRTASR DA TC+IL
Sbjct: 689 KVDDLVAILEKMILRQKCRTVYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYIL 748
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ +LK PL +Y+VACRMF+RNL+PD+K+CE++SK+L+L
Sbjct: 749 MDGYLKKAVPLSAYKVACRMFSRNLIPDVKMCEKLSKRLVL 789
Score = 106 bits (265), Expect = 9e-21
Identities = 62/229 (27%), Positives = 119/229 (51%), Gaps = 4/229 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ G SEA++++N +S+G P+ VTY+ +++GF R G + +A +++ M G+ P
Sbjct: 438 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGGVDKAKKLLQVMHTHGYKP 497
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
+ V L+ LC+ G++ +AR++M ++ + N + ++ ++HG + G L A V+
Sbjct: 498 NTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRREGKLSEACDVV 557
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
+M L P V ++ +L R G+ +EA + ++ L+ G V + ++IH FCQ
Sbjct: 558 REMILKGFFPGPVEINLLLQSLSRDGKTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 617
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVL 676
++ Y +++ L G + EA EL+ K+L
Sbjct: 618 DELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKML 666
Score = 104 bits (259), Expect = 5e-20
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 3/184 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNM--SEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R +M E P+ VTY+ ++H + EA + + KGF
Sbjct: 367 LCKEKRIVEVRHLMEKMAKEHGLVPDQVTYNTLIHMLTKHNHADEALWFLNDAEEKGFRI 426
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKG-CAVNVVNFTTVIHGFCQMGDLDAALSV 352
V + ++ +LC+ GR +A+ L+ E L KG C +VV +T V++GFC++G +D A +
Sbjct: 427 DKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGGVDKAKKL 486
Query: 353 LDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQ 532
L M+ + P+ V+YT +++ L R G+ EA EM P +TY L+H +
Sbjct: 487 LQVMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRR 546
Query: 533 QGKV 544
+GK+
Sbjct: 547 EGKL 550
Score = 84.0 bits (206), Expect = 6e-14
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Frame = +2
Query: 65 TPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARK 244
TP A +S++M + R G+L +A ++ M R G P + N I + R ++A +
Sbjct: 251 TPRA--FSLVMVSYSRAGQLRDALKVLTLMQRAGVEPDLLICNTAIDVFVRANRLEKALR 308
Query: 245 LMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
+E G A +VV + +I G+C + ++ A+ +L+ M PD+V+Y T++ L
Sbjct: 309 FIERMQVVGIAPDVVTYNCMIRGYCDLHRVEEAIELLEAMPSKGCLPDKVSYYTIMGFLC 368
Query: 425 RKGRINEAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCR 595
++ RI E + +KM GL+P VTY +LIH + +
Sbjct: 369 KEKRIVEVRHLMEKMAKEHGLVPDQVTYNTLIHMLTKHNHADEALWFLNDAEEKGFRIDK 428
Query: 596 TAYNQVIEKLCCFGYVDEAYELLGKVL 676
Y+ ++ LC G + EA +L+ ++L
Sbjct: 429 VGYSAIVHALCKEGRMSEAKDLINEML 455
Score = 65.1 bits (157), Expect = 3e-08
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 3/200 (1%)
Frame = +2
Query: 152 MIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGD 331
M R+G + +P +L++ S + G+ A K++ + G +++ T I F +
Sbjct: 243 MKRRGIHRTPRAFSLVMVSYSRAGQLRDALKVLTLMQRAGVEPDLLICNTAIDVFVRANR 302
Query: 332 LDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRS 511
L+ AL ++ M + PD VTY +I R+ EA+E+ + M G LP V+Y +
Sbjct: 303 LEKALRFIERMQVVGIAPDVVTYNCMIRGYCDLHRVEEAIELLEAMPSKGCLPDKVSYYT 362
Query: 512 LIHHFCQQGKVXXXXXXXXXXXXXXNC---RTAYNQVIEKLCCFGYVDEAYELLGKVLRT 682
++ C++ ++ + YN +I L + DEA L
Sbjct: 363 IMGFLCKEKRIVEVRHLMEKMAKEHGLVPDQVTYNTLIHMLTKHNHADEALWFLNDAEEK 422
Query: 683 ASRIDANTCHILIRSFLKNG 742
RID ++ + K G
Sbjct: 423 GFRIDKVGYSAIVHALCKEG 442
Score = 63.5 bits (153), Expect = 9e-08
Identities = 38/155 (24%), Positives = 73/155 (47%)
Frame = +2
Query: 80 TYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEEC 259
TY+ ++ ++G+++EA +++++M+ KG P+PV +I CQ+G+ D ++E+
Sbjct: 641 TYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 700
Query: 260 LKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRI 439
+ + V N VI C +G L+ A +L + D T ++D +K
Sbjct: 701 ILRQKCRTVYN--QVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYILMDGYLKKAVP 758
Query: 440 NEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKV 544
A ++ +M L+P L +GKV
Sbjct: 759 LSAYKVACRMFSRNLIPDVKMCEKLSKRLVLEGKV 793
>ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata] gi|297339453|gb|EFH69870.1| hypothetical protein
ARALYDRAFT_336125 [Arabidopsis lyrata subsp. lyrata]
Length = 814
Score = 395 bits (1016), Expect = e-108
Identities = 189/281 (67%), Positives = 227/281 (80%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LCR G S EAREMMNMSE WW+PN++TYSV+MHG R+EGKLSEACD+VREM+ KGF+P
Sbjct: 502 LCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPG 561
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLL+QSLC+ GRT +ARK MEECL KGCA+NVVNFTTVIHGFCQ +LDAALSVLD
Sbjct: 562 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 621
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL NKH D TYTT++DALG+KGRI EA E+ KKMLH G+ PTPVTYR++IH +CQ
Sbjct: 622 DMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQME 681
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
KV C+T YNQVIEKLC G ++EA +LLGKVLRTASR DA TC+ L
Sbjct: 682 KVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYAL 741
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ +LK G PL +Y+VACRMFNRNL+PD+K+CE++SK+L++
Sbjct: 742 MEGYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVV 782
Score = 107 bits (267), Expect = 5e-21
Identities = 63/229 (27%), Positives = 120/229 (52%), Gaps = 4/229 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ G SEA++++N +S+G P+ VTY+ +++GF R G++ +A +++ M G+ P
Sbjct: 431 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKP 490
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
+ V L+ LC+ G++ +AR++M ++ + N + ++ ++HG + G L A V+
Sbjct: 491 NTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVV 550
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
+M L P V ++ +L R GR +EA + ++ L+ G V + ++IH FCQ
Sbjct: 551 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 610
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVL 676
++ Y +++ L G + EA EL+ K+L
Sbjct: 611 DELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKML 659
Score = 105 bits (262), Expect = 2e-20
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 5/251 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNM--SEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R++M E + VTY+ ++H + EA +++ KGF
Sbjct: 360 LCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRI 419
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKG-CAVNVVNFTTVIHGFCQMGDLDAALSV 352
V + ++ +LC+ GR +A+ L+ E L KG C +VV +T V++GFC++G++D A +
Sbjct: 420 DKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 479
Query: 353 LDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQ 532
L M+ + P+ V+YT +++ L R G+ EA EM P +TY L+H +
Sbjct: 480 LQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRK 539
Query: 533 QGKV--XXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANT 706
+GK+ N +++ LC G EA + + + L I+
Sbjct: 540 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 599
Query: 707 CHILIRSFLKN 739
+I F +N
Sbjct: 600 FTTVIHGFCQN 610
Score = 84.3 bits (207), Expect = 5e-14
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 3/207 (1%)
Frame = +2
Query: 65 TPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARK 244
TP A + +M + R G+L +A ++ M R G P+ + N I + R ++A +
Sbjct: 244 TPEA--FLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR 301
Query: 245 LMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
+E G NVV + +I G+C + ++ A+ +LDDM PD+V+Y T++ L
Sbjct: 302 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLC 361
Query: 425 RKGRINEAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCR 595
++ RI E ++ KKM GL+ VTY +LIH + +
Sbjct: 362 KEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDK 421
Query: 596 TAYNQVIEKLCCFGYVDEAYELLGKVL 676
Y+ ++ LC G + EA +L+ ++L
Sbjct: 422 VGYSAIVHALCKEGRMSEAKDLINEML 448
>ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528950|gb|EEF30943.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 737
Score = 395 bits (1016), Expect = e-108
Identities = 188/281 (66%), Positives = 226/281 (80%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSE-GWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC+ GNS EAREMMN SE WWTPNA+TYSV+MHG RREGKLSEACD+VREM+ KGF+P+
Sbjct: 427 LCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPT 486
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLI+SLC + ++A+K MEECL +GCAVN VNFTTVIHGFCQ ++D ALS+LD
Sbjct: 487 PVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLD 546
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYLNNKHPD VT+T +IDALG+KGRI EA T KML GL PTPVTYR++IH +C+ G
Sbjct: 547 DMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMG 606
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V CRTAYNQVIEKLC FG + A +++G VLRTASRIDANTCH+L
Sbjct: 607 RVEELIKLLGKMLSRSKCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHML 666
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ S+L G PL +Y+VACRMF+RNL+PDLKLCE++SKKL+L
Sbjct: 667 MESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVL 707
Score = 117 bits (292), Expect = 7e-24
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 4/271 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R +M + + P+ VTY+ ++H + G EA + +RE +GF
Sbjct: 286 LCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQV 345
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S C GR D+A++++ E + KGC+ +VV +T V++G C++G ++ A +L
Sbjct: 346 DKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKML 405
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
MY + P+ V+YT +++ L + G EA EM P +TY ++H ++
Sbjct: 406 QQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRRE 465
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTC 709
GK+ T N +I+ LC ++EA + + + L ++A
Sbjct: 466 GKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNF 525
Query: 710 HILIRSFLKNGNPLGSYRVACRMFNRNLVPD 802
+I F ++ N + + M+ N PD
Sbjct: 526 TTVIHGFCQSDNIDTALSLLDDMYLNNKHPD 556
Score = 94.4 bits (233), Expect = 5e-17
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Frame = +2
Query: 8 RRGNSSEAREMMNMSE-GWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPV 184
R G A +++ M + PN + + +H KL +A + M G P+ V
Sbjct: 183 RAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVV 242
Query: 185 EINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDM 364
N LI+ C + + + A +L+ E KGC + V++ TV+ CQ + ++++ M
Sbjct: 243 TYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKM 302
Query: 365 YLNNK-HPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
+NK PD+VTY T++ L + G +EA+E ++ G V Y ++++ FC QG+
Sbjct: 303 VKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGR 362
Query: 542 VXXXXXXXXXXXXXXNCR---TAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCH 712
+ C Y V+ LC G V+EA ++L ++ + + + +
Sbjct: 363 M-DRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYT 421
Query: 713 ILIRSFLKNGNPL 751
L+ ++GN L
Sbjct: 422 ALLNGLCQHGNSL 434
Score = 85.9 bits (211), Expect = 2e-14
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 3/243 (1%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
++ +M + R GKL A ++ M + G P+ + N I L + ++A + +E
Sbjct: 174 FAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQ 233
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G NVV + +I G+C + ++ A+ ++ +M PD+V+Y TV+ L + RI
Sbjct: 234 LVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIK 293
Query: 443 EAVEMTKKMLHSG-LLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCRTAYNQV 613
E + +KM+ L P VTY +L+H + G + Y+ +
Sbjct: 294 EVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAI 353
Query: 614 IEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNL 793
+ C G +D A E++ +++ D T ++ K G + ++ +M+
Sbjct: 354 VNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGC 413
Query: 794 VPD 802
P+
Sbjct: 414 KPN 416
Score = 69.3 bits (168), Expect = 2e-09
Identities = 52/246 (21%), Positives = 98/246 (39%), Gaps = 3/246 (1%)
Frame = +2
Query: 77 VTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEE 256
+ Y +++ + A ++R M+R+G P ++ S + G+ A +++
Sbjct: 137 IVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTM 196
Query: 257 CLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGR 436
K G N++ T IH L+ AL L+ M L P+ VTY +I +
Sbjct: 197 MQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQ 256
Query: 437 INEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNC---RTAYN 607
+ A+E+ +M G P V+Y +++ CQ ++ + YN
Sbjct: 257 VEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYN 316
Query: 608 QVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNR 787
++ L G+ DEA E L + ++D ++ SF G + + M +
Sbjct: 317 TLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITK 376
Query: 788 NLVPDL 805
PD+
Sbjct: 377 GCSPDV 382
Score = 60.8 bits (146), Expect = 6e-07
Identities = 40/159 (25%), Positives = 74/159 (46%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
P+AVT++ I+ ++G++ EA +M++KG P+PV +I C++GR ++ KL
Sbjct: 555 PDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKL 614
Query: 248 MEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGR 427
+ + L + N VI C G+ +AA V+ + D T ++++
Sbjct: 615 LGKMLSRSKCRTAYN--QVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLS 672
Query: 428 KGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKV 544
KG A ++ +M L+P L +GK+
Sbjct: 673 KGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKL 711
>gb|EOY27595.1| Tetratricopeptide repeat-like superfamily protein isoform 2
[Theobroma cacao] gi|508780340|gb|EOY27596.1|
Tetratricopeptide repeat-like superfamily protein isoform
2 [Theobroma cacao] gi|508780341|gb|EOY27597.1|
Tetratricopeptide repeat-like superfamily protein isoform
2 [Theobroma cacao]
Length = 848
Score = 395 bits (1014), Expect = e-107
Identities = 185/281 (65%), Positives = 229/281 (81%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LCR+GNS AREMMN+SE WWTPNA++YSV+MHG R+EGKLSEAC +VREM+ KGF+P
Sbjct: 543 LCRKGNSLRAREMMNVSEEEWWTPNAISYSVVMHGLRKEGKLSEACHVVREMVSKGFFPG 602
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLI+SLCQ G+ D+A+K +EECL KGCAVNVVNFTT+IHG+C+ DL+AALS+LD
Sbjct: 603 PVEINLLIESLCQEGKMDEAKKFLEECLNKGCAVNVVNFTTLIHGYCRKDDLEAALSLLD 662
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+NKHPD VTYTTVIDALG+ GRI EA ++T KML GL+PTPVTYR++IH +CQ G
Sbjct: 663 DMYLSNKHPDAVTYTTVIDALGKNGRIEEATDLTMKMLKKGLVPTPVTYRTVIHRYCQMG 722
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V C+TAYNQVIEKLC FG ++EA +LLG++L+TASR DA TC +L
Sbjct: 723 RVEDLLKLLDKMLSRQKCKTAYNQVIEKLCSFGNLEEADKLLGRILKTASRTDAKTCTML 782
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ S+L PL +Y+VACRMFNRNL+PDLKL E+V K+L+L
Sbjct: 783 MESYLSKEMPLSAYKVACRMFNRNLIPDLKLSEKVIKQLML 823
Score = 121 bits (304), Expect = 3e-25
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 4/271 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNM--SEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R++M + P+ VTY+ ++H + G EA + +RE +GF
Sbjct: 402 LCKEKQVKEVRDLMEKMSKDSNLFPDQVTYNTLIHMLSKHGHADEALEFLREAEGRGFRI 461
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S C+ GR D+A+ ++ E L KGC+ +VV +T V+ GFC++G LD A +L
Sbjct: 462 DKVGHSAIVHSYCKQGRIDEAKSIVNEMLSKGCSPDVVTYTAVVDGFCRIGKLDQAEKML 521
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
MY + P+ V+YT ++ L RKG A EM P ++Y ++H ++
Sbjct: 522 QQMYKHGCKPNTVSYTALLTGLCRKGNSLRAREMMNVSEEEWWTPNAISYSVVMHGLRKE 581
Query: 536 GKV--XXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTC 709
GK+ N +IE LC G +DEA + L + L ++
Sbjct: 582 GKLSEACHVVREMVSKGFFPGPVEINLLIESLCQEGKMDEAKKFLEECLNKGCAVNVVNF 641
Query: 710 HILIRSFLKNGNPLGSYRVACRMFNRNLVPD 802
LI + + + + + M+ N PD
Sbjct: 642 TTLIHGYCRKDDLEAALSLLDDMYLSNKHPD 672
Score = 89.0 bits (219), Expect = 2e-15
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 36/194 (18%)
Frame = +2
Query: 65 TPNAVTYSVIMHGF-----------------------------------RREGKLSEACD 139
TPN VTY+ ++ G+ +E ++ E D
Sbjct: 354 TPNVVTYNCLIKGYCNMYQVEDALLLIAEMPSKNCSPDKVSYYTIMSFLCKEKQVKEVRD 413
Query: 140 IVREMIR-KGFYPSPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGF 316
++ +M + +P V N LI L + G D+A + + E +G ++ V + ++H +
Sbjct: 414 LMEKMSKDSNLFPDQVTYNTLIHMLSKHGHADEALEFLREAEGRGFRIDKVGHSAIVHSY 473
Query: 317 CQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTP 496
C+ G +D A S++++M PD VTYT V+D R G++++A +M ++M G P
Sbjct: 474 CKQGRIDEAKSIVNEMLSKGCSPDVVTYTAVVDGFCRIGKLDQAEKMLQQMYKHGCKPNT 533
Query: 497 VTYRSLIHHFCQQG 538
V+Y +L+ C++G
Sbjct: 534 VSYTALLTGLCRKG 547
Score = 84.0 bits (206), Expect = 6e-14
Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 3/243 (1%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+S +M + R GKL +A ++ M + G + N I L R ++A + +
Sbjct: 290 FSYLMVSYSRAGKLRDAMKVLTLMQKAGVELNLSVCNTAIHVLVMANRMEKALRFFQRMQ 349
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G NVV + +I G+C M ++ AL ++ +M N PD+V+Y T++ L ++ ++
Sbjct: 350 LVGITPNVVTYNCLIKGYCNMYQVEDALLLIAEMPSKNCSPDKVSYYTIMSFLCKEKQVK 409
Query: 443 EAVEMTKKM-LHSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCRTAYNQV 613
E ++ +KM S L P VTY +LIH + G + ++ +
Sbjct: 410 EVRDLMEKMSKDSNLFPDQVTYNTLIHMLSKHGHADEALEFLREAEGRGFRIDKVGHSAI 469
Query: 614 IEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNL 793
+ C G +DEA ++ ++L D T ++ F + G + ++ +M+
Sbjct: 470 VHSYCKQGRIDEAKSIVNEMLSKGCSPDVVTYTAVVDGFCRIGKLDQAEKMLQQMYKHGC 529
Query: 794 VPD 802
P+
Sbjct: 530 KPN 532
Score = 73.9 bits (180), Expect = 7e-11
Identities = 42/158 (26%), Positives = 76/158 (48%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
P+AVTY+ ++ + G++ EA D+ +M++KG P+PV +I CQ+GR + KL
Sbjct: 671 PDAVTYTTVIDALGKNGRIEEATDLTMKMLKKGLVPTPVTYRTVIHRYCQMGRVEDLLKL 730
Query: 248 MEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGR 427
+++ L + N VI C G+L+ A +L + D T T ++++
Sbjct: 731 LDKMLSRQKCKTAYN--QVIEKLCSFGNLEEADKLLGRILKTASRTDAKTCTMLMESYLS 788
Query: 428 KGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
K A ++ +M + L+P +I +GK
Sbjct: 789 KEMPLSAYKVACRMFNRNLIPDLKLSEKVIKQLMLEGK 826
Score = 72.0 bits (175), Expect = 2e-10
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 3/248 (1%)
Frame = +2
Query: 71 NAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLM 250
N + Y +++ + A ++R M R+G P + L+ S + G+ A K++
Sbjct: 251 NLIVYYIMLEILSKTKLCQGAKRVLRLMARRGIECQPEAFSYLMVSYSRAGKLRDAMKVL 310
Query: 251 EECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRK 430
K G +N+ T IH ++ AL M L P+ VTY +I
Sbjct: 311 TLMQKAGVELNLSVCNTAIHVLVMANRMEKALRFFQRMQLVGITPNVVTYNCLIKGYCNM 370
Query: 431 GRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNC---RTA 601
++ +A+ + +M P V+Y +++ C++ +V N +
Sbjct: 371 YQVEDALLLIAEMPSKNCSPDKVSYYTIMSFLCKEKQVKEVRDLMEKMSKDSNLFPDQVT 430
Query: 602 YNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMF 781
YN +I L G+ DEA E L + RID ++ S+ K G + + M
Sbjct: 431 YNTLIHMLSKHGHADEALEFLREAEGRGFRIDKVGHSAIVHSYCKQGRIDEAKSIVNEML 490
Query: 782 NRNLVPDL 805
++ PD+
Sbjct: 491 SKGCSPDV 498
>gb|EOY27594.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao]
Length = 761
Score = 395 bits (1014), Expect = e-107
Identities = 185/281 (65%), Positives = 229/281 (81%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LCR+GNS AREMMN+SE WWTPNA++YSV+MHG R+EGKLSEAC +VREM+ KGF+P
Sbjct: 456 LCRKGNSLRAREMMNVSEEEWWTPNAISYSVVMHGLRKEGKLSEACHVVREMVSKGFFPG 515
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLI+SLCQ G+ D+A+K +EECL KGCAVNVVNFTT+IHG+C+ DL+AALS+LD
Sbjct: 516 PVEINLLIESLCQEGKMDEAKKFLEECLNKGCAVNVVNFTTLIHGYCRKDDLEAALSLLD 575
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+NKHPD VTYTTVIDALG+ GRI EA ++T KML GL+PTPVTYR++IH +CQ G
Sbjct: 576 DMYLSNKHPDAVTYTTVIDALGKNGRIEEATDLTMKMLKKGLVPTPVTYRTVIHRYCQMG 635
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V C+TAYNQVIEKLC FG ++EA +LLG++L+TASR DA TC +L
Sbjct: 636 RVEDLLKLLDKMLSRQKCKTAYNQVIEKLCSFGNLEEADKLLGRILKTASRTDAKTCTML 695
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ S+L PL +Y+VACRMFNRNL+PDLKL E+V K+L+L
Sbjct: 696 MESYLSKEMPLSAYKVACRMFNRNLIPDLKLSEKVIKQLML 736
Score = 121 bits (304), Expect = 3e-25
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 4/271 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNM--SEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R++M + P+ VTY+ ++H + G EA + +RE +GF
Sbjct: 315 LCKEKQVKEVRDLMEKMSKDSNLFPDQVTYNTLIHMLSKHGHADEALEFLREAEGRGFRI 374
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S C+ GR D+A+ ++ E L KGC+ +VV +T V+ GFC++G LD A +L
Sbjct: 375 DKVGHSAIVHSYCKQGRIDEAKSIVNEMLSKGCSPDVVTYTAVVDGFCRIGKLDQAEKML 434
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
MY + P+ V+YT ++ L RKG A EM P ++Y ++H ++
Sbjct: 435 QQMYKHGCKPNTVSYTALLTGLCRKGNSLRAREMMNVSEEEWWTPNAISYSVVMHGLRKE 494
Query: 536 GKV--XXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTC 709
GK+ N +IE LC G +DEA + L + L ++
Sbjct: 495 GKLSEACHVVREMVSKGFFPGPVEINLLIESLCQEGKMDEAKKFLEECLNKGCAVNVVNF 554
Query: 710 HILIRSFLKNGNPLGSYRVACRMFNRNLVPD 802
LI + + + + + M+ N PD
Sbjct: 555 TTLIHGYCRKDDLEAALSLLDDMYLSNKHPD 585
Score = 89.0 bits (219), Expect = 2e-15
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 36/194 (18%)
Frame = +2
Query: 65 TPNAVTYSVIMHGF-----------------------------------RREGKLSEACD 139
TPN VTY+ ++ G+ +E ++ E D
Sbjct: 267 TPNVVTYNCLIKGYCNMYQVEDALLLIAEMPSKNCSPDKVSYYTIMSFLCKEKQVKEVRD 326
Query: 140 IVREMIR-KGFYPSPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGF 316
++ +M + +P V N LI L + G D+A + + E +G ++ V + ++H +
Sbjct: 327 LMEKMSKDSNLFPDQVTYNTLIHMLSKHGHADEALEFLREAEGRGFRIDKVGHSAIVHSY 386
Query: 317 CQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTP 496
C+ G +D A S++++M PD VTYT V+D R G++++A +M ++M G P
Sbjct: 387 CKQGRIDEAKSIVNEMLSKGCSPDVVTYTAVVDGFCRIGKLDQAEKMLQQMYKHGCKPNT 446
Query: 497 VTYRSLIHHFCQQG 538
V+Y +L+ C++G
Sbjct: 447 VSYTALLTGLCRKG 460
Score = 84.0 bits (206), Expect = 6e-14
Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 3/243 (1%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+S +M + R GKL +A ++ M + G + N I L R ++A + +
Sbjct: 203 FSYLMVSYSRAGKLRDAMKVLTLMQKAGVELNLSVCNTAIHVLVMANRMEKALRFFQRMQ 262
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G NVV + +I G+C M ++ AL ++ +M N PD+V+Y T++ L ++ ++
Sbjct: 263 LVGITPNVVTYNCLIKGYCNMYQVEDALLLIAEMPSKNCSPDKVSYYTIMSFLCKEKQVK 322
Query: 443 EAVEMTKKM-LHSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCRTAYNQV 613
E ++ +KM S L P VTY +LIH + G + ++ +
Sbjct: 323 EVRDLMEKMSKDSNLFPDQVTYNTLIHMLSKHGHADEALEFLREAEGRGFRIDKVGHSAI 382
Query: 614 IEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNL 793
+ C G +DEA ++ ++L D T ++ F + G + ++ +M+
Sbjct: 383 VHSYCKQGRIDEAKSIVNEMLSKGCSPDVVTYTAVVDGFCRIGKLDQAEKMLQQMYKHGC 442
Query: 794 VPD 802
P+
Sbjct: 443 KPN 445
Score = 73.9 bits (180), Expect = 7e-11
Identities = 42/158 (26%), Positives = 76/158 (48%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
P+AVTY+ ++ + G++ EA D+ +M++KG P+PV +I CQ+GR + KL
Sbjct: 584 PDAVTYTTVIDALGKNGRIEEATDLTMKMLKKGLVPTPVTYRTVIHRYCQMGRVEDLLKL 643
Query: 248 MEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGR 427
+++ L + N VI C G+L+ A +L + D T T ++++
Sbjct: 644 LDKMLSRQKCKTAYN--QVIEKLCSFGNLEEADKLLGRILKTASRTDAKTCTMLMESYLS 701
Query: 428 KGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
K A ++ +M + L+P +I +GK
Sbjct: 702 KEMPLSAYKVACRMFNRNLIPDLKLSEKVIKQLMLEGK 739
Score = 72.0 bits (175), Expect = 2e-10
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 3/248 (1%)
Frame = +2
Query: 71 NAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLM 250
N + Y +++ + A ++R M R+G P + L+ S + G+ A K++
Sbjct: 164 NLIVYYIMLEILSKTKLCQGAKRVLRLMARRGIECQPEAFSYLMVSYSRAGKLRDAMKVL 223
Query: 251 EECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRK 430
K G +N+ T IH ++ AL M L P+ VTY +I
Sbjct: 224 TLMQKAGVELNLSVCNTAIHVLVMANRMEKALRFFQRMQLVGITPNVVTYNCLIKGYCNM 283
Query: 431 GRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNC---RTA 601
++ +A+ + +M P V+Y +++ C++ +V N +
Sbjct: 284 YQVEDALLLIAEMPSKNCSPDKVSYYTIMSFLCKEKQVKEVRDLMEKMSKDSNLFPDQVT 343
Query: 602 YNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMF 781
YN +I L G+ DEA E L + RID ++ S+ K G + + M
Sbjct: 344 YNTLIHMLSKHGHADEALEFLREAEGRGFRIDKVGHSAIVHSYCKQGRIDEAKSIVNEML 403
Query: 782 NRNLVPDL 805
++ PD+
Sbjct: 404 SKGCSPDV 411
>ref|XP_006468264.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Citrus sinensis]
Length = 837
Score = 392 bits (1008), Expect = e-107
Identities = 185/281 (65%), Positives = 226/281 (80%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC G S EAREM+N SE WWTPNA+TYSV+MHG RREGKLSEACD+VREM++KGF+P+
Sbjct: 527 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 586
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLIQSLC+ G+ D A+K M+ECL KGCAVNVVNFT++I GFCQ GDL+ ALS+LD
Sbjct: 587 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 646
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL K PD VTYTT+IDAL + GR+ EA E+ KML GL+PT VTYR++IH +CQ G
Sbjct: 647 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 706
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V CRTAYNQVIE LC FGY++EA ++LGKVLRTAS+ DA+TCH+L
Sbjct: 707 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 766
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ S+L G PL +Y+VACRMFNRNL+PDLKLC++VS++LIL
Sbjct: 767 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 807
Score = 119 bits (297), Expect = 2e-24
Identities = 77/305 (25%), Positives = 139/305 (45%), Gaps = 39/305 (12%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ E R++M +++ + VTY+ ++H + G EA + ++E + GF
Sbjct: 386 LCKEKRIKEVRDLMEKMVNDSNLFHDQVTYNTLIHMLSKHGHGDEALEFLKEAEKGGFRV 445
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S C+ GR ++A++L+ + + GC +VV +T V++GFC++G+LD A +L
Sbjct: 446 DKVGYSAVVHSFCKEGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 505
Query: 356 DDMY------------------------------LNNKH-----PDEVTYTTVIDALGRK 430
MY +N P+ +TY+ V+ L R+
Sbjct: 506 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 565
Query: 431 GRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTAYN- 607
G+++EA ++ ++M+ G PTPV LI C++GK+ N
Sbjct: 566 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 625
Query: 608 -QVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFN 784
+I C G ++EA LL + D T +I + KNG + + +M +
Sbjct: 626 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 685
Query: 785 RNLVP 799
+ LVP
Sbjct: 686 KGLVP 690
Score = 84.7 bits (208), Expect = 4e-14
Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 3/243 (1%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+S +M + R GKL A ++ M + P+ + N I L + +A + +E
Sbjct: 274 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 333
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G NV+ + +I G+C + + A+ ++D+M L PD+V+Y TV+ L ++ RI
Sbjct: 334 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 393
Query: 443 EAVEMTKKMLH-SGLLPTPVTYRSLIHHFCQ--QGKVXXXXXXXXXXXXXXNCRTAYNQV 613
E ++ +KM++ S L VTY +LIH + G + Y+ V
Sbjct: 394 EVRDLMEKMVNDSNLFHDQVTYNTLIHMLSKHGHGDEALEFLKEAEKGGFRVDKVGYSAV 453
Query: 614 IEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNL 793
+ C G ++EA EL+ ++ + D T ++ F + G + ++ +M++
Sbjct: 454 VHSFCKEGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 513
Query: 794 VPD 802
P+
Sbjct: 514 KPN 516
Score = 83.2 bits (204), Expect = 1e-13
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 3/231 (1%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
PN + + +H KL++A + M G P+ + N LI+ C + R A KL
Sbjct: 304 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 363
Query: 248 MEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLN-NKHPDEVTYTTVIDALG 424
++E KGC+ + V++ TV+ C+ + +++ M + N D+VTY T+I L
Sbjct: 364 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQVTYNTLIHMLS 423
Query: 425 RKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCR--T 598
+ G +EA+E K+ G V Y +++H FC++G++
Sbjct: 424 KHGHGDEALEFLKEAEKGGFRVDKVGYSAVVHSFCKEGRIEEAKELVNQMSQMGCIPDVV 483
Query: 599 AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPL 751
Y V+ C G +D+A ++L ++ + + + + NG L
Sbjct: 484 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 534
Score = 71.6 bits (174), Expect = 3e-10
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 10/271 (3%)
Frame = +2
Query: 23 SEAREMMNMSEGWWTP-------NAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSP 181
S+A E + + +W + + Y +++ + A ++R M R+G P
Sbjct: 212 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 271
Query: 182 VEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDD 361
+ L+ + + G+ A ++ K A N++ T IH L AL L+
Sbjct: 272 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 331
Query: 362 MYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
M L P+ +TY +I RI +A+++ +M G P V+Y +++ + C++ +
Sbjct: 332 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 391
Query: 542 VXXXXXXXXXXXXXXNC---RTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCH 712
+ N + YN +I L G+ DEA E L + + R+D
Sbjct: 392 IKEVRDLMEKMVNDSNLFHDQVTYNTLIHMLSKHGHGDEALEFLKEAEKGGFRVDKVGYS 451
Query: 713 ILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
++ SF K G + + +M +PD+
Sbjct: 452 AVVHSFCKEGRIEEAKELVNQMSQMGCIPDV 482
Score = 71.6 bits (174), Expect = 3e-10
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Frame = +2
Query: 5 CRRGNSSEAREMMN-MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSP 181
C++G+ EA +++ M P+ VTY+ I+ + G++ EA +++ +M+ KG P+
Sbjct: 633 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 692
Query: 182 VEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDD 361
V +I CQVGR + KL+E+ L K N VI C G L+ A +L
Sbjct: 693 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIENLCSFGYLEEAGKILGK 750
Query: 362 MYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
+ D T ++++ KG A ++ +M + L+P + + +GK
Sbjct: 751 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 810
>ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
[Glycine max]
Length = 789
Score = 390 bits (1003), Expect = e-106
Identities = 186/281 (66%), Positives = 226/281 (80%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC G S EAREM+N+SE WWTPNA+TY V+MHGFRREGKLSEACD+ REM+ KGF+P+
Sbjct: 487 LCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPT 546
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLIQSLCQ + +A+K +EECL KGCA+NVVNFTTVIHGFCQ+GD++AALSVL+
Sbjct: 547 PVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLE 606
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+NKHPD VTYT + DALG+KGR++EA E+ KML GL PTPVT+RS+IH +CQ G
Sbjct: 607 DMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWG 666
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V RT YN VIEKLC FG ++EA +LLGKVLRTAS++DANTCH+L
Sbjct: 667 RVDDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVL 726
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ S LK G L +Y+VAC+MF RNL PDLKLCE+V+KKL+L
Sbjct: 727 MESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVL 767
Score = 111 bits (277), Expect = 4e-22
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LC+ + + +M + + P+ VTY+ ++H + G +A ++E KGF+
Sbjct: 346 LCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI 405
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
V + ++ S CQ GR D+A+ L+ + + C +VV +T ++ GFC++G +D A +L
Sbjct: 406 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKML 465
Query: 356 DDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQ 535
MY + P+ V+YT +++ L G+ EA EM P +TY ++H F ++
Sbjct: 466 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRRE 525
Query: 536 GKVXXXXXXXXXXXXXXNCRT--AYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTC 709
GK+ T N +I+ LC V EA + L + L I+
Sbjct: 526 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 585
Query: 710 HILIRSFLKNGNPLGSYRVACRMFNRNLVPD 802
+I F + G+ + V M+ N PD
Sbjct: 586 TTVIHGFCQIGDMEAALSVLEDMYLSNKHPD 616
Score = 97.1 bits (240), Expect = 7e-18
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 36/194 (18%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKG--------------------------- 166
P+ VTY+ ++ G+ ++ +A +++ + KG
Sbjct: 299 PDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCL 358
Query: 167 ---------FYPSPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFC 319
P V N LI L + G D A ++E KG ++ V ++ ++H FC
Sbjct: 359 MEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFC 418
Query: 320 QMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPV 499
Q G +D A S++ DMY + +PD VTYT ++D R GRI+EA +M ++M G P V
Sbjct: 419 QKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTV 478
Query: 500 TYRSLIHHFCQQGK 541
+Y +L++ C GK
Sbjct: 479 SYTALLNGLCHSGK 492
Score = 76.6 bits (187), Expect = 1e-11
Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 3/243 (1%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+ +M + R GKL A ++ M + G P+ N I L + + ++A + +E
Sbjct: 234 FGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQ 293
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G ++V + ++I G+C + ++ AL ++ + PD+V+Y TV+ L ++ +I
Sbjct: 294 VTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIE 353
Query: 443 EAVEMTKKMLH-SGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCRTAYNQV 613
+ + +KM+ S L+P VTY +LIH + G + Y+ +
Sbjct: 354 QVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAI 413
Query: 614 IEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNL 793
+ C G +DEA L+ + + D T ++ F + G + ++ +M+
Sbjct: 414 VHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGC 473
Query: 794 VPD 802
P+
Sbjct: 474 KPN 476
Score = 70.5 bits (171), Expect = 7e-10
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Frame = +2
Query: 140 IVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFC 319
++R M R+G SP ++ S + G+ A +++ K G N+ T I+
Sbjct: 218 VLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLV 277
Query: 320 QMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPV 499
+ L+ AL L+ M + PD VTY ++I RI +A+E+ + G P V
Sbjct: 278 KGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKV 337
Query: 500 TYRSLIHHFCQQGKVXXXXXXXXXXXXXXNC---RTAYNQVIEKLCCFGYVDEAYELLGK 670
+Y +++ C++ K+ N + YN +I L G+ D+A L +
Sbjct: 338 SYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 397
Query: 671 VLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
ID ++ SF + G + + M++R+ PD+
Sbjct: 398 AEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDV 442
>ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 390 bits (1002), Expect = e-106
Identities = 186/281 (66%), Positives = 224/281 (79%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LC G S EAREM+N+SE WWTPNA+TY +MHG RREGKLSEACD+ REM+ KGF+P+
Sbjct: 491 LCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPT 550
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLLIQSLCQ + +A+K +EECL KGCA+NVVNFTTVIHGFCQ+GD++AALSVLD
Sbjct: 551 PVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLD 610
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL+ KHPD VTYT + DALG+KGR++EA E+ KML GL PTPVTYRS+IH + Q G
Sbjct: 611 DMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWG 670
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V RT YNQVIEKLC FG ++EA +LLGKVLRTAS++DANTCH+L
Sbjct: 671 RVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVL 730
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ S+LK G + +Y+VACRMF RNL PDLKLCE+VSKKL+L
Sbjct: 731 MESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVL 771
Score = 114 bits (286), Expect = 3e-23
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 37/281 (13%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKL 247
P+ VTY+ ++H + G +A ++E KGF+ V + ++ S CQ GR D+A+ L
Sbjct: 374 PDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 433
Query: 248 MEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMY-------------------- 367
+ + +GC +VV +T ++ GFC++G +D A +L MY
Sbjct: 434 VIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCH 493
Query: 368 ------------LNNKH---PDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVT 502
++ +H P+ +TY V+ L R+G+++EA ++T++M+ G PTPV
Sbjct: 494 SGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVE 553
Query: 503 YRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTAYN--QVIEKLCCFGYVDEAYELLGKVL 676
LI CQ KV N VI C G ++ A +L +
Sbjct: 554 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613
Query: 677 RTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNLVP 799
+ DA T L + K G + + +M ++ L P
Sbjct: 614 LSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDP 654
Score = 106 bits (264), Expect = 1e-20
Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Frame = +2
Query: 68 PNAVTYSVIMHGFRREGKLSEACDIVREMI-RKGFYPSPVEINLLIQSLCQVGRTDQARK 244
P+ V+Y +M +E K+ E ++ +M+ P V N LI L + G D A
Sbjct: 338 PDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALA 397
Query: 245 LMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALG 424
++E KG ++ V ++ ++H FCQ G +D A S++ DMY +PD VTYT ++D
Sbjct: 398 FLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFC 457
Query: 425 RKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
R GRI+EA ++ ++M G P V+Y +L++ C GK
Sbjct: 458 RLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGK 496
Score = 84.3 bits (207), Expect = 5e-14
Identities = 58/243 (23%), Positives = 110/243 (45%), Gaps = 3/243 (1%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+ +M + R GKL A ++ M + G PS N I L + G+ ++A K +E
Sbjct: 238 FGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQ 297
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G ++V + ++I G+C + ++ AL ++ + PD+V+Y TV+ L ++ +I
Sbjct: 298 VTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIE 357
Query: 443 EAVEMTKKML-HSGLLPTPVTYRSLIHHFCQQGKV--XXXXXXXXXXXXXXNCRTAYNQV 613
E + +KM+ +S L+P VTY +LIH + G + Y+ +
Sbjct: 358 EVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAI 417
Query: 614 IEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNL 793
+ C G +DEA L+ + D T ++ F + G + ++ +M+
Sbjct: 418 VHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGC 477
Query: 794 VPD 802
P+
Sbjct: 478 KPN 480
Score = 71.2 bits (173), Expect = 4e-10
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 10/271 (3%)
Frame = +2
Query: 23 SEAREMMNMSEGWWTP-------NAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSP 181
S+A E + ++ +W + V Y ++ + A ++R M R+G P
Sbjct: 176 SQADERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPP 235
Query: 182 VEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDD 361
++ S + G+ A +++ K G ++ T I+ + G L+ AL L+
Sbjct: 236 EAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLER 295
Query: 362 MYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
M + PD VTY ++I RI +A+E+ + G P V+Y +++ C++ K
Sbjct: 296 MQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKK 355
Query: 542 VXXXXXXXXXXXXXXNC---RTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCH 712
+ N + YN +I L G+ D+A L + ID
Sbjct: 356 IEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYS 415
Query: 713 ILIRSFLKNGNPLGSYRVACRMFNRNLVPDL 805
++ SF + G + + M++R PD+
Sbjct: 416 AIVHSFCQKGRMDEAKSLVIDMYSRGCNPDV 446
>ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
[Cucumis sativus]
Length = 847
Score = 389 bits (1000), Expect = e-106
Identities = 184/281 (65%), Positives = 227/281 (80%), Gaps = 1/281 (0%)
Frame = +2
Query: 2 LCRRGNSSEAREMMNMSEG-WWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPS 178
LCR G S EAR+MMNMSE WWTPNA+TYSV++HG RREGKL+EACD+VREMI KGF+P+
Sbjct: 537 LCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPN 596
Query: 179 PVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLD 358
PVEINLL+ SLC+ G+ +A +L++EC+ KGCAVNVVNFTTVIHGFCQ DL+AALS+LD
Sbjct: 597 PVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 656
Query: 359 DMYLNNKHPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQG 538
DMYL NKHPD VTYT +IDAL + RI EA E+T KML GL+P+PVTYRS+IH +C++G
Sbjct: 657 DMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKG 716
Query: 539 KVXXXXXXXXXXXXXXNCRTAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHIL 718
+V +TAYN VIEKLC FGY++EA LLG+VLRTASR DA TCH+L
Sbjct: 717 RVEDLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVL 776
Query: 719 IRSFLKNGNPLGSYRVACRMFNRNLVPDLKLCEEVSKKLIL 841
+ S+L G P+ +Y+VACRMFNRNL+PDLKLCE+VSK+L++
Sbjct: 777 MESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVV 817
Score = 113 bits (282), Expect = 1e-22
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 39/305 (12%)
Frame = +2
Query: 2 LCRRGNSSEAREMMN--MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYP 175
LCR +E RE++ ++ P+ VTY+ ++ + G EA +I++E + F
Sbjct: 396 LCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKV 455
Query: 176 SPVEINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVL 355
VE + ++ + C+ G+ +A++L+ E KGC +VV +T+V+ GFC++G LD A ++
Sbjct: 456 DKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMM 515
Query: 356 DDMYLNNKHPDEVTYTT-----------------------------------VIDALGRK 430
MY ++ P+ VTYTT V+ L R+
Sbjct: 516 QQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRRE 575
Query: 431 GRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTAYN- 607
G++NEA ++ ++M+ G P PV L+H C+ GK N
Sbjct: 576 GKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNF 635
Query: 608 -QVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFN 784
VI C ++ A LL + D T LI + K + + +M
Sbjct: 636 TTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLR 695
Query: 785 RNLVP 799
+ LVP
Sbjct: 696 QGLVP 700
Score = 89.7 bits (221), Expect = 1e-15
Identities = 61/253 (24%), Positives = 118/253 (46%), Gaps = 5/253 (1%)
Frame = +2
Query: 8 RRGNSSEAREMMN-MSEGWWTPNAVTYSVIMHGFRREGKLSEACDIVREMIRKGFYPSPV 184
R G +A +++ M + PN + +H +L +A M+ G P+ V
Sbjct: 293 RAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVV 352
Query: 185 EINLLIQSLCQVGRTDQARKLMEECLKKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDM 364
N LI+ C V + DQA +L+++ KGC+ + V++ TV+ C+ L+ ++ M
Sbjct: 353 TYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKM 412
Query: 365 YLNNK-HPDEVTYTTVIDALGRKGRINEAVEMTKKMLHSGLLPTPVTYRSLIHHFCQQGK 541
++K PD VTY ++I L + G +EA+E+ ++ V Y +++H +C++GK
Sbjct: 413 QTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGK 472
Query: 542 VXXXXXXXXXXXXXXNCR---TAYNQVIEKLCCFGYVDEAYELLGKVLRTASRIDANTCH 712
+ C Y V++ C G +D+A +++ ++ + + +A T
Sbjct: 473 I-QKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYT 531
Query: 713 ILIRSFLKNGNPL 751
+ +NG L
Sbjct: 532 TFLNGLCRNGKSL 544
Score = 88.6 bits (218), Expect = 3e-15
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 1/242 (0%)
Frame = +2
Query: 83 YSVIMHGFRREGKLSEACDIVREMIRKGFYPSPVEINLLIQSLCQVGRTDQARKLMEECL 262
+ +M + R G+L +A ++ M + G P+ N I L +A + E +
Sbjct: 284 FGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMV 343
Query: 263 KKGCAVNVVNFTTVIHGFCQMGDLDAALSVLDDMYLNNKHPDEVTYTTVIDALGRKGRIN 442
G A NVV + +I G+C + +D A+ ++D M PD+V+Y TV+ L R R+N
Sbjct: 344 LIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLN 403
Query: 443 EAVEMTKKM-LHSGLLPTPVTYRSLIHHFCQQGKVXXXXXXXXXXXXXXNCRTAYNQVIE 619
E E+ KKM S LLP VTY SLI Q++
Sbjct: 404 EIRELIKKMQTDSKLLPDHVTYNSLI------------------------------QMLS 433
Query: 620 KLCCFGYVDEAYELLGKVLRTASRIDANTCHILIRSFLKNGNPLGSYRVACRMFNRNLVP 799
K G+ DEA E+L + + ++D ++ ++ K G + + MF++ P
Sbjct: 434 K---HGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDP 490
Query: 800 DL 805
D+
Sbjct: 491 DV 492