BLASTX nr result

ID: Rehmannia26_contig00021070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00021070
         (629 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352858.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   116   5e-24
ref|XP_004245897.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   110   3e-22
emb|CBI33881.3| unnamed protein product [Vitis vinifera]               89   1e-15
gb|EXB99718.1| Ubiquitin carboxyl-terminal hydrolase 21 [Morus n...    82   2e-13
ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    67   4e-09
ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    67   4e-09
ref|XP_006491731.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    62   1e-07
ref|XP_006428428.1| hypothetical protein CICLE_v10013784mg [Citr...    62   1e-07
gb|EMJ10281.1| hypothetical protein PRUPE_ppa003467mg [Prunus pe...    61   2e-07
ref|XP_002329560.1| predicted protein [Populus trichocarpa] gi|5...    56   7e-06

>ref|XP_006352858.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Solanum
           tuberosum]
          Length = 712

 Score =  116 bits (291), Expect = 5e-24
 Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 12/123 (9%)
 Frame = +1

Query: 31  TPQEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDRIACKRRLDKDMD-DLETRQAFSFVK 207
           TP  P RSPSPEIYREDPPD  + IP  HLRTV +++CK++L KD++ D+E +QA S +K
Sbjct: 590 TPDTPPRSPSPEIYREDPPDNDYHIPHGHLRTVGQVSCKKQLQKDLEQDMERKQACSLIK 649

Query: 208 KNMPGSRGQQMLDALRRSKTEASVN-RKKGRKSG--QDD--------SSIRPVLRPLVAG 354
           KNMPGSR QQ+L A++ S++E S N R++G +    +DD        SSI   +RP++AG
Sbjct: 650 KNMPGSRAQQLLAAMQGSRSEGSANKRRRGMEVSPTRDDSNPTSRRRSSIGSTMRPVMAG 709

Query: 355 THR 363
           + R
Sbjct: 710 SMR 712


>ref|XP_004245897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Solanum
           lycopersicum]
          Length = 714

 Score =  110 bits (276), Expect = 3e-22
 Identities = 59/124 (47%), Positives = 77/124 (62%), Gaps = 13/124 (10%)
 Frame = +1

Query: 31  TPQEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDRIACKRRLDKD--MDDLETRQAFSFV 204
           TP  P RSPSPEIYREDPPD  + IPR HLR V +++CK++L KD    D+E +QA   +
Sbjct: 591 TPDTPPRSPSPEIYREDPPDNDYHIPRGHLRMVGQVSCKKQLQKDDVEQDMERKQACFLI 650

Query: 205 KKNMPGSRGQQMLDAL-----------RRSKTEASVNRKKGRKSGQDDSSIRPVLRPLVA 351
           KKNMPGSRGQQ+L A+           RR + E S  R     + +  SSI   +RP++A
Sbjct: 651 KKNMPGSRGQQLLAAMQGLRSEGSAKKRRRRMEVSPTRDDSNSTSRRRSSIGSTMRPVMA 710

Query: 352 GTHR 363
           G+ R
Sbjct: 711 GSMR 714


>emb|CBI33881.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 39/89 (43%), Positives = 63/89 (70%)
 Frame = +1

Query: 34  PQEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDRIACKRRLDKDMDDLETRQAFSFVKKN 213
           PQ P RSPSP+IY E+PP+  ++IPR HLR  +++ACK+ L+K ++D   R+A     KN
Sbjct: 405 PQTPPRSPSPDIYAEEPPEVSYNIPRGHLRQKNQVACKKPLNKALEDSRKREACKLC-KN 463

Query: 214 MPGSRGQQMLDALRRSKTEASVNRKKGRK 300
           MP SR  +++ A++ S++E S+ +KK ++
Sbjct: 464 MPASRSMRLMAAMKGSQSEGSLGKKKSKR 492


>gb|EXB99718.1| Ubiquitin carboxyl-terminal hydrolase 21 [Morus notabilis]
          Length = 667

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 9/115 (7%)
 Frame = +1

Query: 34  PQEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDRIACKRRLDKDMDDLETRQAFSFVKKN 213
           P  P R+ SP+++  + P   + IPRNHL++ D+  CKR L+K  DD ET++A  ++ ++
Sbjct: 550 PLTPPRARSPDVFSFETPGPSYQIPRNHLKSEDQPTCKRLLNKRPDDSETKEAVRYLTRS 609

Query: 214 MPGSRGQQMLDALRRSKTEASVNRKK---------GRKSGQDDSSIRPVLRPLVA 351
           MP SRG ++LDA+ R ++E +  +K+         G  SG+  S+      P+VA
Sbjct: 610 MPSSRGSRLLDAMFRPQSEGAARKKRKFEFPCKGAGPASGRHKSNNGSAAHPVVA 664


>ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
           sativus]
          Length = 621

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
 Frame = +1

Query: 34  PQEPLRSPSPE-IYREDPPDAGFSIPRNHLRTVDRIACKRRLDKDMDDLETRQAFSFVKK 210
           P  P+RSPSP+ ++R   P+  + IP +HL+T         L+K ++D E + A  +VKK
Sbjct: 513 PLSPVRSPSPDNVFRT--PEPQYRIPVDHLKTEKCSTSGSPLNKGVEDSERKAAMRYVKK 570

Query: 211 NMPGSRGQQMLDALRRSKTE-ASVNRKKGRKS 303
           NMPGSRG +M+ A+  S++E +S+N+KK  +S
Sbjct: 571 NMPGSRGSKMIAAILGSQSEGSSLNKKKRLRS 602


>ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
           sativus]
          Length = 676

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
 Frame = +1

Query: 34  PQEPLRSPSPE-IYREDPPDAGFSIPRNHLRTVDRIACKRRLDKDMDDLETRQAFSFVKK 210
           P  P+RSPSP+ ++R   P+  + IP +HL+T         L+K ++D E + A  +VKK
Sbjct: 568 PLSPVRSPSPDNVFRT--PEPQYRIPVDHLKTEKCSTSGSPLNKGVEDSERKAAMRYVKK 625

Query: 211 NMPGSRGQQMLDALRRSKTE-ASVNRKKGRKS 303
           NMPGSRG +M+ A+  S++E +S+N+KK  +S
Sbjct: 626 NMPGSRGSKMIAAILGSQSEGSSLNKKKRLRS 657


>ref|XP_006491731.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like isoform X2
           [Citrus sinensis]
          Length = 682

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 33/90 (36%), Positives = 54/90 (60%)
 Frame = +1

Query: 34  PQEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDRIACKRRLDKDMDDLETRQAFSFVKKN 213
           P  P RSPSP+I+   P +  + +PR HL+   + ACK +L+++  DLE ++A   +KK 
Sbjct: 572 PLTPPRSPSPDIHSGKPRET-YQVPREHLKLESKGACKTQLERNGKDLERQEAVRCIKKT 630

Query: 214 MPGSRGQQMLDALRRSKTEASVNRKKGRKS 303
           M G R  +++ A+     + S+NRK+  KS
Sbjct: 631 MTGERYMKLMAAV----NDVSLNRKRRLKS 656


>ref|XP_006428428.1| hypothetical protein CICLE_v10013784mg [Citrus clementina]
           gi|568877407|ref|XP_006491730.1| PREDICTED: ubiquitin
           carboxyl-terminal hydrolase 21-like isoform X1 [Citrus
           sinensis] gi|557530485|gb|ESR41668.1| hypothetical
           protein CICLE_v10013784mg [Citrus clementina]
          Length = 683

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 33/90 (36%), Positives = 54/90 (60%)
 Frame = +1

Query: 34  PQEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDRIACKRRLDKDMDDLETRQAFSFVKKN 213
           P  P RSPSP+I+   P +  + +PR HL+   + ACK +L+++  DLE ++A   +KK 
Sbjct: 573 PLTPPRSPSPDIHSGKPRET-YQVPREHLKLESKGACKTQLERNGKDLERQEAVRCIKKT 631

Query: 214 MPGSRGQQMLDALRRSKTEASVNRKKGRKS 303
           M G R  +++ A+     + S+NRK+  KS
Sbjct: 632 MTGERYMKLMAAV----NDVSLNRKRRLKS 657


>gb|EMJ10281.1| hypothetical protein PRUPE_ppa003467mg [Prunus persica]
          Length = 572

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 22/121 (18%)
 Frame = +1

Query: 34  PQEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDRIACKRRL------------------- 156
           P  P RSPSP++   + P+  + +PR+H ++VD +ACKR L                   
Sbjct: 436 PMTPPRSPSPDLPSFESPEPIYCLPRDHSKSVDNVACKRSLNNIIRSDHLKSADNALCKR 495

Query: 157 --DKDMDDLETRQAFSFV-KKNMPGSRGQQMLDALRRSKTEASVNRKKGRKSGQDDSSIR 327
             + D+DD +  +AF ++ KK++   RG Q+L A+   ++E S N+++ R        + 
Sbjct: 496 PSNNDVDDSKRIEAFRYLSKKSLTRDRGSQLLAAMVGPQSEGSSNKRRKRVGSSPCKKVS 555

Query: 328 P 330
           P
Sbjct: 556 P 556


>ref|XP_002329560.1| predicted protein [Populus trichocarpa]
           gi|566161720|ref|XP_006385660.1| UBIQUITIN-SPECIFIC
           PROTEASE 21 family protein [Populus trichocarpa]
           gi|550342791|gb|ERP63457.1| UBIQUITIN-SPECIFIC PROTEASE
           21 family protein [Populus trichocarpa]
          Length = 809

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
 Frame = +1

Query: 34  PQEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDRIACKRRLDKDMDDLETRQAFSFVKKN 213
           P  P RSP+ ++Y  + P+A   IPR HL+  + + CKR   K   D +T +A   +K+ 
Sbjct: 705 PSAPPRSPTSDVYSGELPEARRCIPREHLKVENHVNCKRSSKKGTKDSQTAEALRCIKR- 763

Query: 214 MPGSRGQQMLDAL--RRSKT 267
           MP +RG +++ AL  R  KT
Sbjct: 764 MPTARGMKLMAALLPRNDKT 783


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