BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00019659
         (979 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...   349   1e-93
gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily p...   347   3e-93
gb|EMJ17743.1| hypothetical protein PRUPE_ppb007734mg [Prunus pe...   337   3e-90
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...   333   6e-89
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr...   333   8e-89
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   330   4e-88
ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi...   324   4e-86
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis...   321   2e-85
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi...   321   2e-85
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   310   5e-82
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   305   1e-80
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   299   1e-78
gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus...   297   4e-78
ref|XP_002306741.1| pentatricopeptide repeat-containing family p...   295   2e-77
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ...   283   9e-74
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar...   274   3e-71
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps...   272   1e-70
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi...   270   6e-70
ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr...   268   2e-69
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   258   2e-66

>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 550

 Score =  349 bits (895), Expect = 1e-93
 Identities = 173/251 (68%), Positives = 204/251 (81%), Gaps = 1/251 (0%)
 Frame = -3

Query: 752 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 573
           M PC  SF   STSISKFISD+P L MLE  C ++KDL+KIHAHLIKTGLA DT+AASRV
Sbjct: 1   MTPCCCSFTS-STSISKFISDKPHLFMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRV 59

Query: 572 LAFCAT-ARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQP 396
           LAFCA+ A D++YA+ VF  I   NLF WNTIIRGF  SSNP  AISLF++MLV++TVQP
Sbjct: 60  LAFCASPAGDINYAYMVFRHIHNPNLFIWNTIIRGFSNSSNPEAAISLFIDMLVTSTVQP 119

Query: 395 EKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLF 216
           ++LTYPSVFKAY  LGLA DGAQLHGR++KLGLE D F+RN+IIHMY+NCGLL  AR +F
Sbjct: 120 QRLTYPSVFKAYAQLGLAHDGAQLHGRVVKLGLESDQFVRNTIIHMYSNCGLLSEARRVF 179

Query: 215 DENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALD 36
           DE+ + D+VAWNSM+MGL+KCG+V E+ RLF KMP RN+ SWNSMI G VRNG + EALD
Sbjct: 180 DEDLEFDIVAWNSMIMGLSKCGEVGESRRLFDKMPQRNSISWNSMIGGSVRNGMYTEALD 239

Query: 35  LFCEMQDMKIR 3
           LF EMQ  KI+
Sbjct: 240 LFGEMQKQKIK 250



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 48/184 (26%), Positives = 95/184 (51%)
 Frame = -3

Query: 665 TNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWN 486
           +NC  + + +++        L  D +A + ++   +   ++  +  +F ++ ++N  +WN
Sbjct: 167 SNCGLLSEARRV----FDEDLEFDIVAWNSMIMGLSKCGEVGESRRLFDKMPQRNSISWN 222

Query: 485 TIIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIK 306
           ++I G  ++     A+ LF EM     ++P + T  S+  A   LG    G  +H  I K
Sbjct: 223 SMIGGSVRNGMYTEALDLFGEMQ-KQKIKPSEFTMVSLLNASAQLGAIRQGEWIHEYIRK 281

Query: 305 LGLEFDPFIRNSIIHMYANCGLLGNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRL 126
             ++ +P +  +II+MY+ CG +  A ++F+    + +  WNS++MGLA  G  EEA  L
Sbjct: 282 NHIQLNPIVVTAIINMYSKCGSIEKAVHVFEAAPRTGLSCWNSIIMGLATNGCEEEAIEL 341

Query: 125 FVKM 114
           F ++
Sbjct: 342 FSRL 345


>gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 538

 Score =  347 bits (891), Expect = 3e-93
 Identities = 170/252 (67%), Positives = 209/252 (82%), Gaps = 2/252 (0%)
 Frame = -3

Query: 752 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 573
           M  CF S  P   SI+KFISDQP+LS+LE NC S+KDLKK+HA LIKTGL  D IAASRV
Sbjct: 1   MVQCFCSLTPSPASITKFISDQPYLSLLENNCTSMKDLKKLHAQLIKTGLVNDIIAASRV 60

Query: 572 LAFCAT-ARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQP 396
           LAFC + A D++YA+ VF QI+  NLFTWNTIIRGF QSSNP++AISLF++MLV +++QP
Sbjct: 61  LAFCVSPAGDMNYAYLVFTQIKNPNLFTWNTIIRGFSQSSNPQIAISLFIDMLVGSSIQP 120

Query: 395 EKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLF 216
           E+LTYPSVFKAY  LGLA DG QLHGR+IKLGL++D FIRN+II+MYANCGLL  A  +F
Sbjct: 121 ERLTYPSVFKAYAQLGLACDGRQLHGRVIKLGLDYDQFIRNTIIYMYANCGLLSEAWRMF 180

Query: 215 D-ENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEAL 39
           D E+ + D+VAWNSM++GLAKCG+V+E+ RLF KM +RN  SWNSMISG+VRNG+++EAL
Sbjct: 181 DEEHMELDIVAWNSMIIGLAKCGEVDESRRLFNKMVSRNTVSWNSMISGYVRNGRFLEAL 240

Query: 38  DLFCEMQDMKIR 3
           +LF EMQ+  IR
Sbjct: 241 ELFQEMQEEHIR 252



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 47/161 (29%), Positives = 81/161 (50%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A   ++D +  +F ++  +N  +WN++I G+ ++     A+ LF EM 
Sbjct: 188 DIVAWNSMIIGLAKCGEVDESRRLFNKMVSRNTVSWNSMISGYVRNGRFLEALELFQEMQ 247

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               ++P + T  S+  A   LG    G  +H  I+K   E +  +  +II MY  CG  
Sbjct: 248 -EEHIRPSEFTMVSLLNACACLGAITQGKWIHDYILKQNFELNGIVVTAIIDMYCKCGNA 306

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKM 114
             A  +F  +    +  WNSM++GLA  G   EA +LF K+
Sbjct: 307 EKALQVFTTSPKEGLSCWNSMILGLATNGCENEARQLFSKL 347


>gb|EMJ17743.1| hypothetical protein PRUPE_ppb007734mg [Prunus persica]
          Length = 297

 Score =  337 bits (865), Expect = 3e-90
 Identities = 166/251 (66%), Positives = 204/251 (81%), Gaps = 1/251 (0%)
 Frame = -3

Query: 752 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 573
           M PC  SF   STSISKFIS++P LSMLE  C ++KDL+KIHAHLIKTGL  DT+AASRV
Sbjct: 1   MTPCCCSFTS-STSISKFISERPHLSMLEKQCTNMKDLQKIHAHLIKTGLVSDTVAASRV 59

Query: 572 LAFCAT-ARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQP 396
           LAFCA+ A +++YA+ VF  I+  NLF WNTIIRGF +S +P +AISLF++MLV++ ++P
Sbjct: 60  LAFCASPAGNINYAYMVFRNIQNPNLFIWNTIIRGFSESPSPEIAISLFIDMLVTSAIEP 119

Query: 395 EKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLF 216
            +LTYPSVFKAY  LGLA+DGAQLHGRI+KLGLE D FIRN+IIHMYANCG L  AR +F
Sbjct: 120 HRLTYPSVFKAYAQLGLAQDGAQLHGRILKLGLESDQFIRNTIIHMYANCGFLIEARRMF 179

Query: 215 DENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALD 36
           DE+ + D VAWNSM+MGL+K G+V EA RLF K   RN+ SWNSMISGFVRNGK+ EAL+
Sbjct: 180 DEDLECDTVAWNSMIMGLSKWGEVSEAKRLFDKFSLRNSVSWNSMISGFVRNGKYTEALE 239

Query: 35  LFCEMQDMKIR 3
           LF EMQ+ +++
Sbjct: 240 LFSEMQEERVK 250


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Citrus sinensis]
          Length = 534

 Score =  333 bits (854), Expect = 6e-89
 Identities = 164/243 (67%), Positives = 201/243 (82%), Gaps = 2/243 (0%)
 Frame = -3

Query: 725 PPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCAT-AR 549
           P  TS+SKFISDQP LS+L+  C S+KDLKKIHAHLIKTGLAKD IAASR+L FC + A 
Sbjct: 8   PSPTSMSKFISDQPLLSLLDKQCTSMKDLKKIHAHLIKTGLAKDPIAASRILTFCTSPAG 67

Query: 548 DLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTYPSVF 369
           D++YA+ VF QI+K NLF WNTIIRGF QSS PR AI LF++MLV++ +QP++LTYPS+F
Sbjct: 68  DINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLF 127

Query: 368 KAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDE-NTDSDV 192
           KAY  LGLA DGAQLHGR++K GLEFD FI N+II+MYANCG L  AR +FDE +T+ DV
Sbjct: 128 KAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDV 187

Query: 191 VAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFCEMQDM 12
           VAWNSM++GLAKCG+++E+ RLF KM +RN  SWNSMISG+VRN K+ EAL+LF EMQ+ 
Sbjct: 188 VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ 247

Query: 11  KIR 3
            I+
Sbjct: 248 NIK 250



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 4/198 (2%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A   ++D +  +F ++  +N  +WN++I G+ ++   + A+ LF EM 
Sbjct: 186 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 245

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               ++P + T  S+  A   LG    G  +H  ++    E +  +  +II MY  CG  
Sbjct: 246 -EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 304

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNA----TSWNSMISGF 69
             A  +F+      +  WNSMV GLA  G   EA +LF  + + N     TS+ ++++  
Sbjct: 305 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLTPDYTSFIAVLTAC 364

Query: 68  VRNGKWIEALDLFCEMQD 15
             +GK  +A D F  M +
Sbjct: 365 NHSGKVNQAKDYFTLMTE 382


>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
           gi|557539373|gb|ESR50417.1| hypothetical protein
           CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score =  333 bits (853), Expect = 8e-89
 Identities = 164/243 (67%), Positives = 201/243 (82%), Gaps = 2/243 (0%)
 Frame = -3

Query: 725 PPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCAT-AR 549
           P  TS+SKFISDQP LS+L+  C S+KDLKKIHAHLIKTGL KD IAASR+LAFC + A 
Sbjct: 8   PSPTSMSKFISDQPLLSLLDKQCTSMKDLKKIHAHLIKTGLPKDPIAASRILAFCTSPAG 67

Query: 548 DLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTYPSVF 369
           D++YA+ VF QI+K NLF WNTIIRGF QSS PR AI LF++MLV++ +QP++LTYPS+F
Sbjct: 68  DINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLF 127

Query: 368 KAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDE-NTDSDV 192
           KAY  LGLA DGAQLHGR++K GLEFD FI N+II+MYANCG L  AR +FDE +T+ DV
Sbjct: 128 KAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLIFDEVDTEFDV 187

Query: 191 VAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFCEMQDM 12
           VAWNSM++GLAKCG+++E+ RLF KM +RN  SWNSMISG+VRN K+ EAL+LF EMQ+ 
Sbjct: 188 VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ 247

Query: 11  KIR 3
            I+
Sbjct: 248 NIK 250



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A   ++D +  +F ++  +N  +WN++I G+ ++   + A+ LF EM 
Sbjct: 186 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 245

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               ++P + T  S+  A   LG    G  +H  ++    E +  +  +II MY  CG  
Sbjct: 246 -EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 304

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNA----TSWNSMISGF 69
             A  +F+      +  WNSMV GLA  G   EA +LF  + + N      S+ ++++  
Sbjct: 305 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 364

Query: 68  VRNGKWIEALDLFCEMQD 15
             +GK  +A D F  M +
Sbjct: 365 NHSGKVNQAKDYFTLMTE 382


>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  330 bits (847), Expect = 4e-88
 Identities = 163/249 (65%), Positives = 199/249 (79%), Gaps = 2/249 (0%)
 Frame = -3

Query: 743 CFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAF 564
           C L+   PSTSISKFISD P LS+LE +C ++KDL+KIHAHL+KTGLAK  +A S VLAF
Sbjct: 6   CSLTSPSPSTSISKFISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAF 65

Query: 563 CATAR--DLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEK 390
           CAT+   D++YA+ VF QI   NLF+WNTIIRGF QSS P  AISLF++ML+ ++VQP +
Sbjct: 66  CATSPGGDINYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHR 125

Query: 389 LTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDE 210
           LTYPSVFKAY  LGLA  GAQLHGR+IKLGL+FDPFIRN+II+MYANCG L      F E
Sbjct: 126 LTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYE 185

Query: 209 NTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLF 30
             D D+VAWNSM+MGLAKCG+V+E+ +LF +MP RN  SWNSMISG+VRNG+  EALDLF
Sbjct: 186 RMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLF 245

Query: 29  CEMQDMKIR 3
            +MQ+ +I+
Sbjct: 246 GQMQEERIK 254



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 48/165 (29%), Positives = 86/165 (52%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A   ++D +  +F ++  +N  +WN++I G+ ++   R A+ LF +M 
Sbjct: 190 DIVAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQ 249

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               ++P + T  S+  A   LG  + G  +H  I K   E +  +  SII MY  CG +
Sbjct: 250 -EERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSI 308

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARN 102
           G A  +F+      + +WN+M++GLA  G   EA +LF ++   N
Sbjct: 309 GEAFQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSN 353


>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum tuberosum]
          Length = 522

 Score =  324 bits (830), Expect = 4e-86
 Identities = 162/242 (66%), Positives = 193/242 (79%), Gaps = 3/242 (1%)
 Frame = -3

Query: 719 STSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCATAR--- 549
           STSISKFISDQP+L MLET C ++ DLKKIHAHLIK+GL KD IA+SRVLAF A +    
Sbjct: 8   STSISKFISDQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIASSRVLAFSAKSPPIG 67

Query: 548 DLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTYPSVF 369
           D++YA  VF  IE  NLFTWNTIIRGF +SS P+ AI LF+EML ++ VQP  LTYPSVF
Sbjct: 68  DINYANLVFTHIENPNLFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVF 127

Query: 368 KAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDENTDSDVV 189
           KAY   GL ++GAQLHGRIIKLGLEFD FIRN++++MYA+CG L  AR LFDE+   DVV
Sbjct: 128 KAYARGGLVKNGAQLHGRIIKLGLEFDTFIRNTMLYMYASCGFLVEARKLFDEDEIEDVV 187

Query: 188 AWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFCEMQDMK 9
           +WNSM+MGLAK G+++++WRLF KM  RN  SWNSMISGFVRNGKW EAL+LF  MQ+  
Sbjct: 188 SWNSMIMGLAKSGEIDDSWRLFSKMSTRNDVSWNSMISGFVRNGKWNEALELFSTMQEEN 247

Query: 8   IR 3
           I+
Sbjct: 248 IK 249



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 44/162 (27%), Positives = 90/162 (55%)
 Frame = -3

Query: 599 KDTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEM 420
           +D ++ + ++   A + ++D ++ +F ++  +N  +WN++I GF ++     A+ LF  M
Sbjct: 184 EDVVSWNSMIMGLAKSGEIDDSWRLFSKMSTRNDVSWNSMISGFVRNGKWNEALELFSTM 243

Query: 419 LVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGL 240
                ++P + T  S+  A  HLG  E G  ++  + K  +E +  +  +II MY  CG 
Sbjct: 244 Q-EENIKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCKCGN 302

Query: 239 LGNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKM 114
           +  A ++F   ++  + +WNSM++GLA  G  ++A +LF ++
Sbjct: 303 VEMAWHVFISISNKGLSSWNSMILGLATNGFEDDAIKLFARL 344


>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
           gi|587904202|gb|EXB92403.1| hypothetical protein
           L484_021387 [Morus notabilis]
          Length = 530

 Score =  321 bits (823), Expect = 2e-85
 Identities = 157/243 (64%), Positives = 197/243 (81%), Gaps = 1/243 (0%)
 Frame = -3

Query: 728 NPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCAT-A 552
           +P  TSI+KFISDQP LSMLE  C ++ DL+KIHAHLIKTGL   TIA+SR+LAFCA+ A
Sbjct: 13  SPSPTSIAKFISDQPHLSMLEKRCATMSDLRKIHAHLIKTGLISHTIASSRLLAFCASPA 72

Query: 551 RDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTYPSV 372
            +++YA  VF QI+  NLF WNTIIRGF +SS P+ AI LF++MLV + ++P++LTYPSV
Sbjct: 73  GNINYALMVFSQIQNPNLFIWNTIIRGFSRSSTPQTAIFLFIDMLVGSPLEPQRLTYPSV 132

Query: 371 FKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDENTDSDV 192
           FKAY  LGLA  GAQLHGR+IKLGL+ D F+RN+IIHMY NCG L  AR LFDE+++ D+
Sbjct: 133 FKAYAQLGLACFGAQLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLFDESSELDL 192

Query: 191 VAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFCEMQDM 12
           VAWNSM+MGL+KCG+V E+ RLF +MP RN+ SWNSMISG+VRNGK +EAL+LF +MQ  
Sbjct: 193 VAWNSMIMGLSKCGEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKMQGE 252

Query: 11  KIR 3
            I+
Sbjct: 253 GIK 255



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   +   ++  +  +F ++  +N  +WN++I G+ ++     A+ LF +M 
Sbjct: 191 DLVAWNSMIMGLSKCGEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKMQ 250

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               ++  + T  S+  A   LG    G  +H  I K G+E +  +  +II MY  CG +
Sbjct: 251 GEG-IKASEFTMVSLLNASGRLGAIRQGEWIHEYITKNGIELNVIVVTAIIDMYCKCGSV 309

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPAR-----NATSWNSMISG 72
             A ++F       +  WNSMVMGLA  G  EEA  LF ++ +      +  S+ ++++ 
Sbjct: 310 NKALSVFKTAPKLGLSCWNSMVMGLAMNGCEEEALELFSRLESSIDLRPDGVSFLAVLTA 369

Query: 71  FVRNGKWIEALDLFCEMQ 18
              +G   +A D F  M+
Sbjct: 370 CNHSGMVDKARDYFSLMR 387



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 45/222 (20%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
 Frame = -3

Query: 653 SIKDLKKIHAHLIKTGLAKDTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIR 474
           +I+  + IH ++ K G+  + I  + ++        ++ A SVF    K  L  WN+++ 
Sbjct: 273 AIRQGEWIHEYITKNGIELNVIVVTAIIDMYCKCGSVNKALSVFKTAPKLGLSCWNSMVM 332

Query: 473 GFCQSSNPRVAISLFVEMLVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLE 294
           G   +     A+ LF  +  S  ++P+ +++ +V  A  H G+  D A+ +  +++    
Sbjct: 333 GLAMNGCEEEALELFSRLESSIDLRPDGVSFLAVLTACNHSGMV-DKARDYFSLMRGKYN 391

Query: 293 FDPFIR--NSIIHMYANCGLLGNARNL-FDENTDSDVVAWNSMVMGLAKCGQVEEAWRLF 123
            +P  R  + ++ +    G L  A  L      + D + W S++    K G +E A R  
Sbjct: 392 IEPSTRHYSCMVDVLGKAGHLEEAEKLILSMPINPDAIIWGSLLSACRKHGNIEMAQRAL 451

Query: 122 ---VKMPARNATSWNSMISGFVRNGKWIEALDLFCEMQDMKI 6
              +++    ++++  M + +  +  + EA+     M++ +I
Sbjct: 452 ERVIELDPSESSAYVLMSNVYGSSSHYDEAVKQRINMKEKRI 493


>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum lycopersicum]
          Length = 522

 Score =  321 bits (823), Expect = 2e-85
 Identities = 159/242 (65%), Positives = 193/242 (79%), Gaps = 3/242 (1%)
 Frame = -3

Query: 719 STSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCATAR--- 549
           STSISKFI DQP+L MLET C ++ DLKKIHAHLIK+GL KD IAASRVLAF A +    
Sbjct: 8   STSISKFILDQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIAASRVLAFSAKSPPIG 67

Query: 548 DLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTYPSVF 369
           D++YA  VF  IE  N FTWNTIIRGF +SS P+ AI LF+EML ++ VQP  LTYPSVF
Sbjct: 68  DINYANLVFTHIENPNPFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVF 127

Query: 368 KAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDENTDSDVV 189
           KAY   G+A++GAQLHGRI+KLGLEFD FIRN++++MYA+CG L  AR LFDE+   DVV
Sbjct: 128 KAYARGGIAKNGAQLHGRIMKLGLEFDTFIRNTLLYMYASCGFLVEARKLFDEDEIEDVV 187

Query: 188 AWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFCEMQDMK 9
           +WNSM++GLAK G+++++WRLF KMP RN  SWNSMISGFVRNGKW EAL+LF  MQ+  
Sbjct: 188 SWNSMIIGLAKSGEIDDSWRLFSKMPTRNDVSWNSMISGFVRNGKWNEALELFSTMQEEN 247

Query: 8   IR 3
           ++
Sbjct: 248 VK 249



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 44/162 (27%), Positives = 90/162 (55%)
 Frame = -3

Query: 599 KDTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEM 420
           +D ++ + ++   A + ++D ++ +F ++  +N  +WN++I GF ++     A+ LF  M
Sbjct: 184 EDVVSWNSMIIGLAKSGEIDDSWRLFSKMPTRNDVSWNSMISGFVRNGKWNEALELFSTM 243

Query: 419 LVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGL 240
                V+P + T  S+  A  HLG  E G  ++  + K  +E +  +  +II MY  C  
Sbjct: 244 Q-EENVKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCKCAN 302

Query: 239 LGNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKM 114
           +  A ++F  +++  + +WNSM++GLA  G  ++A +LF ++
Sbjct: 303 VEMAWHVFVSSSNKGLSSWNSMILGLATNGFEDDAIKLFARL 344


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  310 bits (794), Expect = 5e-82
 Identities = 153/247 (61%), Positives = 197/247 (79%), Gaps = 2/247 (0%)
 Frame = -3

Query: 740 FLSFNPPS-TSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAF 564
           F    PPS  +ISK ISDQ +LSML+ NC ++KDLKKIH+ LIKTGLAKDT AASR+LAF
Sbjct: 4   FCCLLPPSPATISKLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAF 63

Query: 563 CAT-ARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEKL 387
           CA+ A D++YA+ VF QI+  N+F WNTIIRGF +SS P+ +ISL+++ML+++ VQP++L
Sbjct: 64  CASPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRL 123

Query: 386 TYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDEN 207
           TYPSVFKA+  L LA +GAQLHG++IKLGLE D FIRN+I+ MY NCG    AR +FD  
Sbjct: 124 TYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRG 183

Query: 206 TDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFC 27
            D D+VAWN+M+MG+AKCG V+E+ RLF KM  RNA SWNSMISG+VRNG++ +AL+LF 
Sbjct: 184 MDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQ 243

Query: 26  EMQDMKI 6
           +MQ  +I
Sbjct: 244 KMQVERI 250



 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 4/220 (1%)
 Frame = -3

Query: 662 NCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNT 483
           NC    + +K+       G+  D +A + ++   A    +D +  +F ++  +N  +WN+
Sbjct: 169 NCGFTSEARKV----FDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNS 224

Query: 482 IIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKL 303
           +I G+ ++     A+ LF +M V   ++P + T  S+  A   LG    G  +H  ++K 
Sbjct: 225 MISGYVRNGRFFDALELFQKMQVER-IEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKK 283

Query: 302 GLEFDPFIRNSIIHMYANCGLLGNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLF 123
             E +P +  +II MY+ CG +  A  +F       +  WNSM++GLA  GQ  EA +LF
Sbjct: 284 KFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLF 343

Query: 122 VKMPARNA----TSWNSMISGFVRNGKWIEALDLFCEMQD 15
             + + +      S+ ++++     G   +A D F  M+D
Sbjct: 344 SVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRD 383


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
           gi|449530724|ref|XP_004172343.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  305 bits (782), Expect = 1e-80
 Identities = 144/245 (58%), Positives = 200/245 (81%), Gaps = 1/245 (0%)
 Frame = -3

Query: 734 SFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCAT 555
           S +P STS    IS+QP+LSM++  C +++DL++ HAHLIK+G A ++ AASR+LAFCA+
Sbjct: 10  SLSPISTS-KLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCAS 68

Query: 554 AR-DLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTYP 378
              ++DYA+ VF Q++  NLF+WNT+IRGF QSSNP++A+ LF++MLVS+ V+P++LTYP
Sbjct: 69  PLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYP 128

Query: 377 SVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDENTDS 198
           S+FKAY+ LGLA DGAQLHGRIIKLGL+FDPFIRN+I++MYA  G L  AR +F++  + 
Sbjct: 129 SIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEF 188

Query: 197 DVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFCEMQ 18
           DVV+WNSM++GLAKCG+++E+ +LF KMP +N  SWNSMI G+VRNG + EAL LF +MQ
Sbjct: 189 DVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQ 248

Query: 17  DMKIR 3
           + +I+
Sbjct: 249 EERIQ 253



 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 45/158 (28%), Positives = 85/158 (53%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D ++ + ++   A   ++D +  +F ++  +N  +WN++I G+ ++   + A+ LF++M 
Sbjct: 189 DVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQ 248

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               +QP + T  S+  A   +G    G  +H  I K  L+ +  +  +II MY  CG +
Sbjct: 249 -EERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSI 307

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLF 123
           GNA  +F++     + +WNSM+ GLA  G  +EA  +F
Sbjct: 308 GNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVF 345


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score =  299 bits (765), Expect = 1e-78
 Identities = 152/245 (62%), Positives = 193/245 (78%), Gaps = 5/245 (2%)
 Frame = -3

Query: 725 PPSTS----ISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCA 558
           PPS+S    I+KFISDQP L+ML+T C ++KDL+KIHAH+IKTGLA  T+AASRVL FCA
Sbjct: 9   PPSSSSSPSIAKFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCA 68

Query: 557 TAR-DLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTY 381
           ++  D++YA+ +F  I   NL+ WNTIIRGF +SS P +AISLFV+ML S+ V P++LTY
Sbjct: 69  SSSGDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSS-VLPQRLTY 127

Query: 380 PSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDENTD 201
           PSVFKAY  LG   DGAQLHGR++KLGLE D FI+N+II+MYAN GLL  AR +FDE  D
Sbjct: 128 PSVFKAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVD 187

Query: 200 SDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFCEM 21
            DVVA NSM+MGLAKCG+V+++ RLF  MP R   +WNSMISG+VRN + +EAL+LF +M
Sbjct: 188 LDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKM 247

Query: 20  QDMKI 6
           Q  ++
Sbjct: 248 QGERV 252



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 48/186 (25%), Positives = 91/186 (48%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A   ++D +  +F  +  +   TWN++I G+ ++     A+ LF +M 
Sbjct: 189 DVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQ 248

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               V+P + T  S+  A  HLG  + G  +H  + +   E +  +  +II MY  CG++
Sbjct: 249 -GERVEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVI 307

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNG 57
             A  +F+ +    +  WNS+++GLA  G   +A   F K+ A +    +    G +   
Sbjct: 308 VKAIEVFEASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTAC 367

Query: 56  KWIEAL 39
           K+I A+
Sbjct: 368 KYIGAV 373


>gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
          Length = 525

 Score =  297 bits (761), Expect = 4e-78
 Identities = 152/247 (61%), Positives = 190/247 (76%), Gaps = 3/247 (1%)
 Frame = -3

Query: 746 PCFLSFNPPSTS--ISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 573
           P   S  PPS+S  I+ FISD P L+ML+  C ++KDL+KIH H+IKTGLA D IAASRV
Sbjct: 2   PILCSALPPSSSPSIANFISDHPCLTMLQNQCTNMKDLQKIHPHIIKTGLALDHIAASRV 61

Query: 572 LAFCATAR-DLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQP 396
           L FCA++  D++YA+ VF  I   NL+ WNTIIRGF +SS P+ AISLFV+ML SA V+P
Sbjct: 62  LTFCASSSGDINYAYLVFTGIPNPNLYCWNTIIRGFSRSSTPQFAISLFVDMLYSA-VEP 120

Query: 395 EKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLF 216
           ++LTYPSVFKAY  LG   DGAQLHGR++KLGLE D FI N+I++MYAN GL+  AR +F
Sbjct: 121 QRLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVF 180

Query: 215 DENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALD 36
           DE  + DVVA NSM+MGLAKCG+V+++ RLF  MP R A SWNSMISG+VRNG+  E L+
Sbjct: 181 DEPLELDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGLE 240

Query: 35  LFCEMQD 15
           LF +MQ+
Sbjct: 241 LFRKMQE 247



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
 Frame = -3

Query: 605 LAKDTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFV 426
           L  D +A + ++   A   ++D +  +F  +  +   +WN++I G+ ++      + LF 
Sbjct: 184 LELDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGLELFR 243

Query: 425 EMLVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANC 246
           +M     V+P + T  S+  A  HLG  + G  +H  I +   + +  +  +II MY  C
Sbjct: 244 KMQEEG-VEPSEFTMVSLLSACAHLGALQHGEWVHDYIKRGNFKLNVIVLTAIIDMYCKC 302

Query: 245 GLLGNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARN----ATSWNSMI 78
           G +  A  +F  +    +  WNS+++GLA  G   EA   F K+ + N      S+  ++
Sbjct: 303 GSIEKAVEVFAASPTRGLPCWNSIIIGLALNGHEREAIEYFSKLESSNIKPDCVSFIGVL 362

Query: 77  SGFVRNGKWIEALDLFCEMQD 15
           +     G   EA D F  M D
Sbjct: 363 TACKYLGAVREARDYFALMMD 383



 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 4/218 (1%)
 Frame = -3

Query: 644 DLKKIHAHLIKTGLAKDTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFC 465
           D  ++H  ++K GL KD   ++ +L   A +  +  A  VF +  + ++   N++I G  
Sbjct: 140 DGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVFDEPLELDVVACNSMIMGLA 199

Query: 464 QSSNPRVAISLFVEMLVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDP 285
           +      +  LF  M     V     ++ S+   Y   G   +G +L  ++ + G+E   
Sbjct: 200 KCGEVDKSRRLFDNMPTRTAV-----SWNSMISGYVRNGRLTEGLELFRKMQEEGVEPSE 254

Query: 284 FIRNSIIHMYANCGLLGNARNLFDE----NTDSDVVAWNSMVMGLAKCGQVEEAWRLFVK 117
           F   S++   A+ G L +   + D     N   +V+   +++    KCG +E+A  +F  
Sbjct: 255 FTMVSLLSACAHLGALQHGEWVHDYIKRGNFKLNVIVLTAIIDMYCKCGSIEKAVEVFAA 314

Query: 116 MPARNATSWNSMISGFVRNGKWIEALDLFCEMQDMKIR 3
            P R    WNS+I G   NG   EA++ F +++   I+
Sbjct: 315 SPTRGLPCWNSIIIGLALNGHEREAIEYFSKLESSNIK 352


>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222856190|gb|EEE93737.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 509

 Score =  295 bits (755), Expect = 2e-77
 Identities = 145/226 (64%), Positives = 180/226 (79%), Gaps = 2/226 (0%)
 Frame = -3

Query: 674 MLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCAT-ARDLDYAFSVFCQIEKQNL 498
           ML+ NC S+KDL+KIHA LIKTGLAKDTIAASRVLAFC + A D++YA+ VF QI   NL
Sbjct: 1   MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNL 60

Query: 497 FTWNTIIRGFCQSSNPRVAISLFVEML-VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLH 321
           F WNTIIRGF QSS P  AISLF++M+  S T QP++LTYPSVFKAY  LGLA +GAQLH
Sbjct: 61  FVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLH 120

Query: 320 GRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDENTDSDVVAWNSMVMGLAKCGQVE 141
           GR+IKLGLE D FI+N+I++MY NCG LG A+ +FD  T  DVV WN+M++GLAKCG+++
Sbjct: 121 GRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEID 180

Query: 140 EAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFCEMQDMKIR 3
           ++ RLF KM  RN  SWNSMISG+VR G++ EA++LF  MQ+  I+
Sbjct: 181 KSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIK 226



 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 45/165 (27%), Positives = 81/165 (49%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +  + ++   A   ++D +  +F ++  +N  +WN++I G+ +      A+ LF  M 
Sbjct: 162 DVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQ 221

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               ++P + T  S+  A   LG    G  +H  I+K     +  +  +II MY+ CG +
Sbjct: 222 EEG-IKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSI 280

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARN 102
             A  +F       +  WNS+++GLA  G+  EA RLF K+ + N
Sbjct: 281 DKALQVFKSAPKKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSN 325



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
 Frame = -3

Query: 635 KIHAHLIKTGLAKDTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSS 456
           ++H  +IK GL  D    + +L        L  A  +F      ++ TWNT+I G  +  
Sbjct: 118 QLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCG 177

Query: 455 NPRVAISLFVEMLVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIR 276
               +  LF +ML+  TV     ++ S+   Y   G   +  +L  R+ + G++   F  
Sbjct: 178 EIDKSRRLFDKMLLRNTV-----SWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTM 232

Query: 275 NSIIHMYANCGLLGNARNLFDENTDSDVVAWNSMVMGL-----AKCGQVEEAWRLFVKMP 111
            S+++  A  G L     + D    ++  A NS+V+       +KCG +++A ++F   P
Sbjct: 233 VSLLNACACLGALRQGEWIHDYIVKNNF-ALNSIVITAIIDMYSKCGSIDKALQVFKSAP 291

Query: 110 ARNATSWNSMISGFVRNGKWIEALDLFCEMQDMKIR 3
            +  + WNS+I G   +G+  EA+ LF +++   ++
Sbjct: 292 KKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLK 327


>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325851|gb|EFH56271.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 542

 Score =  283 bits (723), Expect = 9e-74
 Identities = 140/249 (56%), Positives = 186/249 (74%), Gaps = 2/249 (0%)
 Frame = -3

Query: 743 CFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAF 564
           CF     P+   S F+S    L +++T C ++++LK+IHA+LIKTGL  DT+AASRVLAF
Sbjct: 7   CFSGVTVPAIPSSGFVSGNTCLRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAF 66

Query: 563 C-ATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSA-TVQPEK 390
           C A+  D +YA+ VF +I  +N F WNTIIRGF +SS P +AIS+F++ML S+ +V+P++
Sbjct: 67  CCASPSDRNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR 126

Query: 389 LTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDE 210
           LTYPSVFKAY  LGLA DG QLHGR+IK GLE D FIRN+++HMY  CG L  A  LF  
Sbjct: 127 LTYPSVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVG 186

Query: 209 NTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLF 30
               DVVAWNS++MGLAKCG +++A +LF +MP RN  SWNSMISGFVRNG++ +AL++F
Sbjct: 187 MMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMF 246

Query: 29  CEMQDMKIR 3
            EMQ+  ++
Sbjct: 247 REMQERDVK 255



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 51/198 (25%), Positives = 101/198 (51%), Gaps = 4/198 (2%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A    +D A  +F ++ ++N  +WN++I GF ++   + A+ +F EM 
Sbjct: 191 DVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQ 250

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               V+P+  T  S+  A  +LG +E G  +H  I++   E +  +  ++I MY  CG  
Sbjct: 251 -ERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCF 309

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPAR----NATSWNSMISGF 69
                +F+      +  WNSM++GLA  G  E A  LF+++       ++ S+  +++  
Sbjct: 310 EEGLKVFECAPTKQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTAC 369

Query: 68  VRNGKWIEALDLFCEMQD 15
             +G+  +A + F  M++
Sbjct: 370 AHSGEVHKAGEFFRLMRE 387


>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g42920, chloroplastic; Flags: Precursor
           gi|4512663|gb|AAD21717.1| hypothetical protein
           [Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|110738441|dbj|BAF01146.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score =  274 bits (701), Expect = 3e-71
 Identities = 139/255 (54%), Positives = 185/255 (72%), Gaps = 5/255 (1%)
 Frame = -3

Query: 752 MPPCFLSFNP---PSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAA 582
           M P  LSF+    P+   S  +S   +L +++T C ++++LK+IHA LIKTGL  DT+ A
Sbjct: 1   MSPTILSFSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTA 60

Query: 581 SRVLAFC-ATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSA- 408
           SRVLAFC A+  D++YA+ VF +I  +N F WNTIIRGF +SS P +AIS+F++ML S+ 
Sbjct: 61  SRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSP 120

Query: 407 TVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNA 228
           +V+P++LTYPSVFKAY  LG A DG QLHG +IK GLE D FIRN+++HMY  CG L  A
Sbjct: 121 SVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEA 180

Query: 227 RNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWI 48
             +F      DVVAWNSM+MG AKCG +++A  LF +MP RN  SWNSMISGFVRNG++ 
Sbjct: 181 WRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK 240

Query: 47  EALDLFCEMQDMKIR 3
           +ALD+F EMQ+  ++
Sbjct: 241 DALDMFREMQEKDVK 255



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 47/161 (29%), Positives = 86/161 (53%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A    +D A ++F ++ ++N  +WN++I GF ++   + A+ +F EM 
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               V+P+  T  S+  A  +LG +E G  +H  I++   E +  +  ++I MY  CG +
Sbjct: 251 -EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKM 114
               N+F+      +  WNSM++GLA  G  E A  LF ++
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSEL 350


>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
           gi|565472276|ref|XP_006293940.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562647|gb|EOA26837.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562648|gb|EOA26838.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
          Length = 555

 Score =  272 bits (696), Expect = 1e-70
 Identities = 137/252 (54%), Positives = 186/252 (73%), Gaps = 2/252 (0%)
 Frame = -3

Query: 752 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 573
           M P  L ++    +++ F S   +L +++T C ++++LK+IH +LIKTGL  DT+AASRV
Sbjct: 1   MSPTILCYS--GVTVAAFPSPASYLRLIDTQCSTMRELKQIHGNLIKTGLISDTVAASRV 58

Query: 572 LAFC-ATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSA-TVQ 399
           LAFC A+  D++YA+ VF +I  +N F WNTIIRGF QSS P +AIS+F++ML S+ +V+
Sbjct: 59  LAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSQSSFPEMAISIFIDMLCSSPSVK 118

Query: 398 PEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNL 219
           P+ LTYPSVFKAY  LG A DG QLHGR++K GLE D FIRN+++ MY   G L  A  +
Sbjct: 119 PQNLTYPSVFKAYGRLGQAIDGRQLHGRVLKEGLEDDSFIRNTMLQMYVTSGCLVEAWRI 178

Query: 218 FDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEAL 39
           F   TD DVVAWNSM+MGLAKCG + +A +LF +MP RN  SWNSMISGFVRNG++ +AL
Sbjct: 179 FVGMTDFDVVAWNSMIMGLAKCGLISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDAL 238

Query: 38  DLFCEMQDMKIR 3
           ++F EMQ+  ++
Sbjct: 239 EMFREMQERNVK 250



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 45/161 (27%), Positives = 81/161 (50%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A    +  A  +F ++  +N  +WN++I GF ++   + A+ +F EM 
Sbjct: 186 DVVAWNSMIMGLAKCGLISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDALEMFREMQ 245

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               V+P+  T  S+  A  +LG  E G  +H  I +   E +  +  ++I MY  CG +
Sbjct: 246 -ERNVKPDGFTMVSLLNACAYLGANEQGRWIHEYIARNRFELNSIVITALIEMYCKCGCI 304

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKM 114
                +F+      +  WNSM++GLA  G  E A  LF+++
Sbjct: 305 EEGLKVFECAPKKQLSCWNSMILGLANNGCEERAMDLFLEL 345


>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cicer arietinum]
          Length = 536

 Score =  270 bits (690), Expect = 6e-70
 Identities = 136/249 (54%), Positives = 186/249 (74%), Gaps = 4/249 (1%)
 Frame = -3

Query: 752 MPPC--FLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAAS 579
           + PC  F    PP  SISKFISDQP L+ML+ +C ++K    I+ H+IKTGL  + IA++
Sbjct: 2   LTPCSLFSQSPPPPPSISKFISDQPCLTMLQNHCTTLKHFHMIYPHIIKTGLTHNPIAST 61

Query: 578 RVLAFCAT-ARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATV 402
           RVL FCA+ + +++YA+ +F ++   NL++WNTIIR F +SS P+ AISLFV+ML S  +
Sbjct: 62  RVLTFCASPSGNINYAYKLFARMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQ-I 120

Query: 401 QPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARN 222
           QP+ LTYPSVFKAY  L   + G+QLHG ++KLGL+ D FI N+II+MYAN GLL  A+ 
Sbjct: 121 QPQHLTYPSVFKAYAQLSAGDYGSQLHGMVVKLGLQRDQFIHNTIIYMYANSGLLSEAKR 180

Query: 221 LFDENTD-SDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIE 45
           +FDE  +  DVVA+NSM+MG AKCG+++EA +LF +M  R + +WNSMISG+VRNGK +E
Sbjct: 181 VFDEKLELGDVVAFNSMIMGFAKCGEIDEARKLFDEMFTRTSVTWNSMISGYVRNGKLME 240

Query: 44  ALDLFCEMQ 18
           AL+LF +MQ
Sbjct: 241 ALELFHKMQ 249



 Score = 90.5 bits (223), Expect = 9e-16
 Identities = 50/183 (27%), Positives = 92/183 (50%)
 Frame = -3

Query: 662 NCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNT 483
           N   + + K++    ++ G   D +A + ++   A   ++D A  +F ++  +   TWN+
Sbjct: 171 NSGLLSEAKRVFDEKLELG---DVVAFNSMIMGFAKCGEIDEARKLFDEMFTRTSVTWNS 227

Query: 482 IIRGFCQSSNPRVAISLFVEMLVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKL 303
           +I G+ ++     A+ LF +M +   V+P + T  S+  A  HLG  + G  +H  I + 
Sbjct: 228 MISGYVRNGKLMEALELFHKMQLEERVEPSEFTMVSLLNACAHLGALQHGKWVHDYIKRN 287

Query: 302 GLEFDPFIRNSIIHMYANCGLLGNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLF 123
             E +  +  +II MY  CG + NA  +FD      +  WNS+++GLA  G   EA+  F
Sbjct: 288 DFELNVIVLTAIIDMYCKCGSVENAIQVFDTYPGRGLSCWNSIIIGLAMNGHEREAFEFF 347

Query: 122 VKM 114
            ++
Sbjct: 348 SEL 350


>ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum]
           gi|557112734|gb|ESQ53018.1| hypothetical protein
           EUTSA_v10017572mg [Eutrema salsugineum]
          Length = 546

 Score =  268 bits (685), Expect = 2e-69
 Identities = 129/248 (52%), Positives = 181/248 (72%), Gaps = 1/248 (0%)
 Frame = -3

Query: 743 CFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAF 564
           C+     P+ S +  +S    + +++T C ++++LK+IHA+LIKTGL  DTIAASRVLAF
Sbjct: 7   CYSGMTMPTFSSTISVSGNSHIRLIDTQCSTMRELKQIHANLIKTGLISDTIAASRVLAF 66

Query: 563 CATA-RDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEKL 387
           C T+  D+ YA+ +F +I  +N F WNTIIRGF +SS P ++I++F++M  SA+ +P++L
Sbjct: 67  CCTSPSDMSYAYLLFTRINHKNPFVWNTIIRGFSRSSFPEMSITIFIDMFSSASAKPQRL 126

Query: 386 TYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFDEN 207
           TYPSVFKAY  LG A DG QLHG +IK GLE D FIRN+++HMYA CG    A  +F   
Sbjct: 127 TYPSVFKAYASLGKARDGMQLHGMVIKEGLEDDSFIRNTMLHMYATCGCFVEAWRIFMAM 186

Query: 206 TDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEALDLFC 27
              DVVAWNSM+MGLA+ G +E+A +LF +MP RN  SWNSMISGFV+NG++ +AL++F 
Sbjct: 187 KHFDVVAWNSMMMGLARYGLIEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMFR 246

Query: 26  EMQDMKIR 3
           +MQ+  ++
Sbjct: 247 KMQERNVK 254



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 53/198 (26%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A    ++ A  +F ++ ++N  +WN++I GF ++   + A+ +F +M 
Sbjct: 190 DVVAWNSMMMGLARYGLIEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMFRKMQ 249

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
               V+P+  T  S+  A  +LG +E G  +H  I+K   E +  +  ++I MY  CG +
Sbjct: 250 -ERNVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVKNRFELNSIVITALIDMYCKCGCI 308

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPAR----NATSWNSMISGF 69
                +F+   +  +  WNSMV+GLA  G  E A  LF ++ +     ++ S+  +++  
Sbjct: 309 EEGLRVFESAPNKQLSCWNSMVLGLANNGYEERAMDLFSELESSDLEPDSVSFIGVLTAC 368

Query: 68  VRNGKWIEALDLFCEMQD 15
             +GK  EA + F  M++
Sbjct: 369 AYSGKVDEAGEFFRLMRE 386


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  258 bits (659), Expect = 2e-66
 Identities = 137/248 (55%), Positives = 182/248 (73%), Gaps = 8/248 (3%)
 Frame = -3

Query: 737 LSFNPPST---SISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLA 567
           LS +PP     SISKFIS+ P L+ML+ +C +I    +I+ H+IKTGL  + IA++R L 
Sbjct: 9   LSQSPPPQQPPSISKFISNHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALT 68

Query: 566 FCAT-ARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEMLVSATVQPEK 390
           FCA+ + +++YA+ +F ++   NL++WNTIIR F +SS P+ AISLFV+ML S  +QP+ 
Sbjct: 69  FCASPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQ-IQPQY 127

Query: 389 LTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLLGNARNLFD- 213
           LTYPSVFKAY  LG A  GAQLHGR++KLGL+ D FI N+II+MYAN GL+  AR +FD 
Sbjct: 128 LTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDG 187

Query: 212 ---ENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKMPARNATSWNSMISGFVRNGKWIEA 42
              E  D DVVA NSM+MG AKCG+++E+  LF  M  R + SWNSMISG+VRNGK +EA
Sbjct: 188 KKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEA 247

Query: 41  LDLFCEMQ 18
           L+LF +MQ
Sbjct: 248 LELFNKMQ 255



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 44/161 (27%), Positives = 81/161 (50%)
 Frame = -3

Query: 596 DTIAASRVLAFCATARDLDYAFSVFCQIEKQNLFTWNTIIRGFCQSSNPRVAISLFVEML 417
           D +A + ++   A   ++D + ++F  +  +   +WN++I G+ ++     A+ LF +M 
Sbjct: 196 DVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQ 255

Query: 416 VSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFDPFIRNSIIHMYANCGLL 237
           V    +  + T  S+  A  HLG  + G  +H  I +   E +  +  +II MY  CG +
Sbjct: 256 VEG-FEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSV 314

Query: 236 GNARNLFDENTDSDVVAWNSMVMGLAKCGQVEEAWRLFVKM 114
            NA  +F+      +  WNS+++GLA  G   EA+  F K+
Sbjct: 315 ENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKL 355



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 8/218 (3%)
 Frame = -3

Query: 635 KIHAHLIKTGLAKDTIAASRVLAFCATARDLDYAFSVF----CQIEKQNLFTWNTIIRGF 468
           ++H  ++K GL  D    + ++   A    +  A  VF     ++   ++   N++I G+
Sbjct: 148 QLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGY 207

Query: 467 CQSSNPRVAISLFVEMLVSATVQPEKLTYPSVFKAYTHLGLAEDGAQLHGRIIKLGLEFD 288
            +      + +LF +M+   +V     ++ S+   Y   G   +  +L  ++   G E  
Sbjct: 208 AKCGEIDESRNLFDDMITRTSV-----SWNSMISGYVRNGKLMEALELFNKMQVEGFEVS 262

Query: 287 PFIRNSIIHMYANCGLLGNARNLFD----ENTDSDVVAWNSMVMGLAKCGQVEEAWRLFV 120
            F   S+++  A+ G L + + + D     + + +V+   +++    KCG VE A  +F 
Sbjct: 263 EFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFE 322

Query: 119 KMPARNATSWNSMISGFVRNGKWIEALDLFCEMQDMKI 6
             P R  + WNS+I G   NG   EA + F +++  K+
Sbjct: 323 TCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKL 360